Array 1 169322-170899 **** Predicted by CRISPRDetect 2.4 *** >NZ_SHTL01000024.1 Bifidobacterium longum subsp. longum strain MCC10124 contig0024, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 169322 36 100.0 28 .................................... CTGAGATGCGCGCTGGAACACGCTCAGT 169386 36 100.0 28 .................................... AATGCGCTGAAATACGGGTTGGCCAACG 169450 36 100.0 29 .................................... GTGAGGGACACCTTCATCCGCATACTGCA 169515 36 100.0 28 .................................... CCGAGGCCGGTAGGGTTGCGTGTCTGGT 169579 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 169643 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 169707 36 100.0 28 .................................... TTGGTGGTGTTGGGCGTCCGGCGCAGAA 169771 36 100.0 28 .................................... AGGTCGAGCGCCTCCTGCCATCCGGCCT 169835 36 100.0 28 .................................... ACAGTATTATTGTCCTGATATTCATGTC 169899 36 100.0 29 .................................... TCGTCGTCCATCTCTGTACCTCGGTTTCT 169964 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 170028 36 100.0 28 .................................... CGTTCCCCAGTGGGGTGAGTGTGATGCC 170092 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 170157 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 170221 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 170285 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 170349 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 170414 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 170479 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 170543 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 170608 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 170672 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 170736 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 170800 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 170864 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 25 36 99.4 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : TGCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCGGGCTTGTCGGTTCACGCGAATATCGTGGAACACATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //