Array 1 1772181-1770932 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVWN010000001.1 Escherichia coli strain 222A040 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1772180 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 1772119 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 1772058 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 1771997 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 1771936 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 1771875 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 1771814 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 1771753 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 1771692 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 1771631 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 1771570 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 1771509 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 1771448 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 1771387 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 1771326 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 1771265 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 1771204 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 1771143 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 1771082 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 1771021 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 1770960 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //