Array 1 1499242-1502404 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP085988.1 Clostridium sp. M62/1 strain FDAARGOS_1583 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1499242 32 100.0 35 ................................ TTTTACCTCCAAATATAAGTATAACATGCTTTGTT 1499309 32 100.0 36 ................................ AGGCCATCGGATTCATAGCGCAGGAAGTAGAGATGG 1499377 32 100.0 33 ................................ CTACCCTTCTGCTCCCTTTGGAATTACTCCTGG 1499442 32 100.0 35 ................................ CCGAAAACAATATTAGCAATGCCCCTCCAAACCAT 1499509 32 100.0 33 ................................ CCTCATCTTCGGAAGCAAGCTTGACTCTGCGAA 1499574 32 100.0 34 ................................ TGTTCCAAGGCCTACATGTTCCGGCAATACTGCC 1499640 32 100.0 34 ................................ CAGCAGGTCAGCCCATTTTGTACGGGCAAGGGCG 1499706 32 100.0 34 ................................ CATCCGAACAAAATGAGCCTTGGCTGGTAATAGA 1499772 32 100.0 35 ................................ AAATTTACGCCACGATCTTATTTATTGTTTTACTC 1499839 32 100.0 34 ................................ ATATGGACAAGGGAAAGGTAAGCAAAATACATGG 1499905 32 100.0 36 ................................ CCAATGAGCCACTACATCAGGGTGTGCTACACCGTC 1499973 32 100.0 34 ................................ ATCCGCACCGATTCAGACGGACTTTTGCGACGGA 1500039 32 100.0 34 ................................ CATATCCTTTTGGGCTATCTATGTACATGTATTC 1500105 32 100.0 37 ................................ CTCCTATGCATCACCACAGGTTTTTCGCCCTCTCTGG 1500174 32 100.0 36 ................................ ATTAAACACTGCCGCCATATCTTTTCCGCCGTCTGC 1500242 32 100.0 34 ................................ CATTAATCTGTCTTTTAAACCAAATGGATATATT 1500308 32 100.0 36 ................................ TTGCCAGGATGCTTGAAGAGAAAGCTGCTGAGAGTC 1500376 32 100.0 34 ................................ TGGAGCAATAGAATATACTTTTCGTGTACTTTTG 1500442 32 100.0 34 ................................ TACTATTGGATTTTATATGTATTCTGGAATGTAT 1500508 32 100.0 33 ................................ CGCGATGTAGGTGTCCGCCCGTCCTGTCTCCGA 1500573 32 100.0 36 ................................ CCGGATAGCTTTTTTGACCTTGCCATTGTAGATCCA 1500641 32 100.0 37 ................................ TAATAGTGGATTCTTTTACATGCGCCCTGGTCTTTTC 1500710 32 100.0 33 ................................ TACGTCTTTTACTTCCGCTTTATTTAAGACAGC 1500775 32 100.0 35 ................................ AAAGACGGCTCCGTCATCAGTAGCATAGGCAAATA 1500842 32 100.0 35 ................................ CGAACTGTTTCGTCGGCCTGGGCCTGAATCTTATC 1500909 32 100.0 33 ................................ ATAAGCCAGATCATCCTGATACCTTCCGTAATC 1500974 32 100.0 34 ................................ CTGTGTATCCTGAAATTCCGTGTTGCTCTGCCAG 1501040 32 100.0 35 ................................ TTGATGACATTTGTTGTCTATGACGTAATGATACA 1501107 32 100.0 34 ................................ CGAATTGCCCCCGCTGTTTATATCCAGCATCAGA 1501173 32 100.0 36 ................................ CCGCGTCCAAATCCTTCTTTCCGGCGAGTAGACCAA 1501241 32 100.0 35 ................................ TCTTGTTACTGTGACTAAAAAAAAACAGTAGAGCC 1501308 32 100.0 34 ................................ TACATACGATTTTGCGCTTGCTACAATCTTCTCC 1501374 32 100.0 35 ................................ AGCTTGTCCCTTTTAGACTTGCAAGCCCCTTCCTC 1501441 32 100.0 34 ................................ TGCTTGATTGAGAATAAGATAACTGGAAATAACA 1501507 32 100.0 35 ................................ CTACAGCGAGTATATGGACAGCAAACAGTCCTACC 1501574 32 100.0 35 ................................ TCCTCCGCTTCAGGAAGTCCATAAAAGCAGCCCTT 1501641 32 100.0 34 ................................ AACCTGCTCATCTGTAAGATCCGGGTTTGCAGTA 1501707 32 100.0 33 ................................ AGTACAGCGATATAATTGCATAACCATCCCGGC 1501772 32 100.0 36 ................................ CGGATGTGGAGATTGAGGAGAGAGAATGAGCACAGA 1501840 32 100.0 36 ................................ ACTGTCCTGTACGGTCACACACCGGATCAGGGCATC 1501908 32 100.0 34 ................................ CTTCATCTCCCGGTTCAAGATCTTAAATTTTCCC 1501974 32 100.0 34 ................................ TCTCTTGTACCGTTCCAGAGCTTTCAGCTGCTGT 1502040 32 100.0 35 ................................ TAATATAGAAAAAGGGAATCGTTCTGTTACCGACC 1502107 32 100.0 36 ................................ TGTTCCAAAAATCAGAGTGCCGGAAATGCTCTGCTG 1502175 32 100.0 34 ................................ CTCTATCCGCATCCCTCTTGCCAGTAGATCCGTC 1502241 32 100.0 34 ................................ ACATGTCCGTTTAGAAGCTCTTCATCACTGTTTT 1502307 32 96.9 34 .....................C.......... CAGTGCCGATGATACTATTATAGCACATTTTCGC 1502373 32 96.9 0 ..............................G. | ========== ====== ====== ====== ================================ ===================================== ================== 48 32 99.9 35 GTCGCTCCCCTCGCGGGAGCGTGGATTGAAAT # Left flank : TATTGAATTTTCAAGGAACGAATCCCATTTTAGGTATGGGAAGTTTTAGTTAATTACTTATGATGTCAACACAGAAACACCGGAGGGAAAAGCAAGACTGAGAAAAGTGGCAAAACAGTGCGTCAATTACGGAAGGAGAGTCCAGAACTCCGTATTTGAGTGCATTCTGGACAGCGCCCAGTGCGTAAAACTGAAATGTGAACTGGAAGAGCTGGTAGATAAGCAGACAGACAGCCTCCGTTTTTATTATCTGGGAAATAATTATAAAACCAAGGTAGAACATATTGGAGTAGAGAGGGGGACGCCCGCAGATTCTGTATTGATTTTCTAGTGCGAATAACAGTTACACATAAAATTCCCTGGAGATTCGCACCGAAAAAACTGCACAAAAAATTATGAAATGGACAGGATAGAGGGAAAAATGGCCTGTAATAATAAATTATGAATGAAAAAATGTGCAAACTGCTGAAAATCGCACAAGATATTTGGGCAGTTTTGCC # Right flank : TTCTGTATTCTCATTACCATTATATCAATTTAATATGTCAGTCATCTAAAAAATATATTTTACAGGTGTCTAATAATCAGTGTAATATATGAAGTATAGGTAAAAAATTACAACCGACAGGAGGCAATTTCATGAAAGAAAACCATAGCTTAGAAATGATTGGAATTCAGAATACCACAGGCAAGGTTCACTACAATTTAAGCCCTGCCCGTCTGGTAGAGGAGGCTCTTCGCCGCGGTGAAGGTGTGTTAACAGATACAGGTGCTCTTTCTGTTACTACAGGCAAATACACAGGACGTTCACCAAAAGACAAATTCATCGTGGACACAAAGGACGTTCATGATAAGATTGCCTGGGGAGATGTAAATGTTGCTATCTCTGAGGATGCCTACCAGTCAATTAAAAATAAAATGTTTGCATATCTGGCTGACAAGGAATTATACGTATTCCAGGGTTTTGCAGGAGCTGACAAGAAGTACACCAGAAAGTTCATGGTTGTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCTCGCGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //