Array 1 154977-155973 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFY01000001.1 Microcystis aeruginosa NIES-4285 contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 154977 36 100.0 40 .................................... AGCATTAACATTATTATTTATCAAATTAAGTGTATTTGAA 155053 36 100.0 35 .................................... GATCACCGGGAGAAAGGGTTAGCCGAGCTTGAAAA 155124 36 100.0 40 .................................... GTAAATATTGAGCCTCGCATTGATTAAACTCTTTCTTAGA 155200 36 100.0 37 .................................... CCATACTTTTAATATATCTCCTATCCCTAAACCGTGG 155273 36 100.0 36 .................................... CCTACGCTCATTAGCTAACTCCTAAAACTTTCTCTG 155345 36 100.0 34 .................................... GTAACATTCCCCACCTAAAATCTTGCGTAACAGC 155415 36 97.2 37 .C.................................. ATCAAAATACTTGATCTCAATTTGAGTGGGAAGATCA 155488 36 100.0 39 .................................... TTCTCTAAAAGAATCAACTGGTTCCCCCAAAACCCGGCC 155563 36 100.0 41 .................................... CTCATTAGCTTTTCCCTCCATAATTGCGGCGTTTATGGCTT 155640 36 100.0 38 .................................... CCAATCTTAAAGGTTACGTCAGGAATCTGTACCATTTC 155714 36 100.0 43 .................................... TTCTCAGTAGCCTCTAATCTATCCTCTAAGCTTTTCTCTATTA 155793 36 100.0 36 .................................... CCCTGAATTCCCCGGGCTTTAAGAATCTTTACAAAA 155865 36 91.7 35 .........T...TT..................... CCGCTTTAAATTTTGGATTGAAATTTTGTGTTTAT G [155877] 155937 36 75.0 0 .........T..CTT...............CTCCC. | A [155949] ========== ====== ====== ====== ==================================== =========================================== ================== 14 36 97.4 38 CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Left flank : TACTTCCGTTAATGCGTTGTGATCTTTCCCCGAATGGTAATTTTCCGAGGGATCGAGGGTTTGATAACCGACTCCGGGGTGTCGGACGAGGGTGGCGATCAGGAGCATAAGTCGCTGGAACTCGCGACTATCTCGTTCACGCAGTGTTCTTTCCCTAGGGGATTTGGGGTGCTGAGTCATACAGATGCAATCGGTTCAGTCAAGGGGAAAGCCGATATAAATTTACTTCACTCCGAGGGCTAGAAAATCCGATCAGGACTGGAAAAATCAGCCGCTCGATCGAGGGGTTAAATTATTGGCTTTTTAGGGTATCATCGACTAGCGACGGATAGGGGTGGGAGCAGATAACCTCGGTTTCCGGTAAAATCCCTCGATCTACCACAGGATAAGGGTTTTGTGGTTTATGGGGTTGACTGTGCGACCGTATCTAGCTATAATTAACTTATCCGTCGCAACTGGCTTCCGAACCCCAATCCTGTTCGGACGTTTGCCTACCGGCT # Right flank : CCAATCCCTTTCCTGTTGACCCTTGCAAAAGTGCCTCATCTCAACAGACGATTTAAATGCGCGGGCAGCTTATTCTATATGGTAATGTTTAATTGTATTCCCACAAAAGTTGCTTATGTCCTTACCTGAACTCCCTCTTCATCTTCAATTAACCCAAATGGTTTCCGGTTACTGGCTATCTCAGGCCATCTATGCTGCGGCTAAATTAAGTCTAGCCGAGCATTTAAGCAAAGGAACGAAATCCTGTCAAGAATTGGCCTCCCTAACTGAGACTAACCCTGCTGCTTTATACCGACTGATGAGAGCATTAGCTAGTGTGGGAATTTTTCAAGAAACTGAATCTCAACAGTTTATACTAACTCCCTTAGCCGAACATTTATCTAGTGACCATCCCCGGTCAGTAAAAGCGACAGCAATTATGTTAGGAGAAGCCCCCCATTATCAAGCCTGGGGAAATGTGTTACATAGTATTAAAACGGGACAACCATCTTTCGATGATG # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 9729-11062 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFY01000128.1 Microcystis aeruginosa NIES-4285 contig_128, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 9729 36 100.0 37 .................................... GGAGTATAGTGTGGAATCGCTTCCACAGAATGCTCAA 9802 36 100.0 37 .................................... GTATCTAACGGATGAAGAGGAACAACTAGCCAAAGAA 9875 36 100.0 37 .................................... CCGGCAGATGAATGCTTTTGAGGATGCCAAGATTACC 9948 36 100.0 35 .................................... GGTAACACGAGGCCTGCTCGTGCATGATAAATCTC 10019 36 100.0 37 .................................... ACGGGATAGATGTACCTGATGAAATTCTTAATAAATA 10092 36 100.0 36 .................................... GCTGGTGAGCGCACTCGGTCTAGTGCTTATTATCTG 10164 36 100.0 37 .................................... ATATTTTTTCGGAGGATAAATTAACCCCTAGCAAAAT 10237 36 100.0 35 .................................... GTTACTGCTTGCAGCAGGCCGATAGCCTCCATGTA 10308 36 100.0 34 .................................... ATTGCCATTTTTCTCCTTTTGGGTTAGCGGGGAG 10378 36 100.0 34 .................................... CTTTGGCTGCTAGAGGTTTCGATCCGCGTCAGTT 10448 36 100.0 34 .................................... GTAGAAATTCACGACGGCTCAAATTATGAAGGGC 10518 36 100.0 37 .................................... TAAAGTCTTTTCTGTGTTCCGCCCCAAAGGATTTACA 10591 36 100.0 37 .................................... GACTATAGAGAAAAAAGAAGAAAGATAAAAGAATAAA 10664 36 100.0 36 .................................... AATCAGGTGTAGATTTAGTGGCTTATCAGATCACCA 10736 36 100.0 36 .................................... GGGGAGCTTACTGGTTACTCGATGCGATTGCTTCAT 10808 36 100.0 36 .................................... AGGCCTACGTGGAAACCGTTTCACTCACCCCGCTTT 10880 36 100.0 37 .................................... ACTTTTAAATCTTTTGGGGGATTAGACCCTACAGCGA 10953 36 100.0 38 .................................... GTAAAGCTGAAATCGCTCCCCCAGGGATTCCCTTCTGC 11027 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 19 36 100.0 36 GTGTACTAACCTTTGATGCCGTAAGGCGTTGATCAC # Left flank : GAAACTCCTAGCTCTCAGCCACCAGATAATGCTTGGATTTGGACCCCTAGAAAACCCCTAACTTGATTTTTCGCTGTTGGTTAAGTGCGCGAATGCGAGAAAAATTGCGCTGGGAATTGGAAAAAGTCCTCACCCTAAAAGACGACTTAATTTTGATTCGTCTGTCGGAGCAGTGTGTGCGCGATCTGCCTAAGTACAACCGACCTGACACATGGCTTTTGGACGAAAAAGGGTTTCGGGTAATCTAAAAAAAACAAGCATCTCTGGCTGGGAAAAAATCCACGGGCTAAAATTTATTTGTATTGCTAATGCTGTCTCGGTTTCAGGGTTTGACAAGGAACAATTCCTGCTTGCATTTTCTAAAAATCTCACTGGATAACGGTTTTCAGATTCGGTGCTGTCACTCAAAAGCTCTGATCAGAAGATTTCTTGGCGTTTTTCTAGAGGTGCTTGTAAAATGGACTGTGAAGCTATACACCAAAGGCTTTTTCAGCCTTGCC # Right flank : CTCGGATATTTAAGCTTTAAGATAGACAAAAATGGAAAGATCATGGCCAGTAAACGATCGCTTTTTAGAACTCCGTTGTCGCTGGATGACCCTGATCGGGGAACATCTGCAAGACGATCGAGGACAACTATTAGAGTATTGGCGGGTTGAAAAAGCTGATTCCGTCATCGTTCTGCCCGTTCAAAACTCGATGATACTGCTGCCCGCTCCCAGTTATCGCCCCGGACTGGGACAAACAACCCTCGATTTCCCCGGCGGTCGGATTTCCGAGGAGCAAGACCATCACGAGGCGGCGTTAATGACTCTAAAACGAGAATTAGGAATTGAAGCAACGGCAGTGACCCGATTAACTCCCCTAAATAGCGAGGGTTGGGCGGTCAATAGCTCCTTTTCCAATCAGAAACTCTACGGTTTTATCGCCGATATCGACGGCGACCTATCTACCGGCGAAGTATTGACCTATCCCGCTAATTCGATTGGAGTCAGCGATTTGTTGAAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTACTAACCTTTGATGCCGTAAGGCGTTGATCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 8161-3452 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFY01000004.1 Microcystis aeruginosa NIES-4285 contig_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 8160 37 100.0 37 ..................................... TAGGCTCCATTTTTGCCCAGGATTTTTTGATTCCCAC 8086 37 100.0 35 ..................................... AATGCTGTTCGCCGGAAGCTATGGGTGCTGATCCC 8014 37 100.0 36 ..................................... GGCAATGGGATGATCACATTAAGAAAAGCAAATACT 7941 37 100.0 40 ..................................... TCGAGTCGCAATCGAGAGGGGGTCGATAGAGAAAAAAGAT 7864 37 100.0 35 ..................................... CTCCCCCCGCTCTTGGGGAGGGGGGGAGCCGGAGA 7792 37 100.0 35 ..................................... GCTGAGGCCCATAAGAAGTATGTCATTCACTGTCC 7720 37 100.0 34 ..................................... AACGAAATCAGTAACAACGTAACTGGACTATACA 7649 37 100.0 35 ..................................... AGTTACACCGAATCTTCCTTAGATACCGTATCTAT 7577 37 100.0 38 ..................................... GGCAGCCGCATGATGCAGGAGGAGTGGGAGAATAAAAA 7502 37 100.0 34 ..................................... ATCGAAGGCGACCCCACCCCCCAGCTTCCTCCCG 7431 37 100.0 37 ..................................... AAAAGCCGATGAGAGGAACGATGAACAAAACTGACTT 7357 37 100.0 39 ..................................... CAGTCCATTTTCGGTGAGACCAGTATCTCACTGACCAAC 7281 37 100.0 34 ..................................... AAGTTTTCCCATGAAGCGCGATCGCAACGGCCAA 7210 37 100.0 35 ..................................... CAGGGTTTGACACATTCTAATGCAAGTAAGCATCT 7138 37 100.0 41 ..................................... CATTGAGAGTAGGGGGAAGTGGGCAGATAAAAATGGTTCCA 7060 37 100.0 36 ..................................... AAAAAAATCAATCTCTATCATCCTTTTGCATCTGTC 6987 37 100.0 34 ..................................... AGACGGTGAGGTGATACCTGGCATTGGCGGCTCT 6916 37 100.0 35 ..................................... GTCTTGGGCGTATTTAACCCACTGTTCTCTGTACC 6844 37 100.0 34 ..................................... TATGAAGATCAACGTGATTGGCAAGCAAATACGA 6773 37 100.0 36 ..................................... TCGTTAGCGGCTGCTCAGATGGGTCATTCCGTAAAA 6700 37 100.0 36 ..................................... CGGCTATTTCCCAAGCCCGGATCAGAAATTGTATTT 6627 37 100.0 34 ..................................... AGGGGCTTGTCGCCTGCCCTGCCGGGGAAAAGGT 6556 37 100.0 41 ..................................... CCCCAGAGAATTCCTACGGCGCGGCGATTTACTTTAGCCGT 6478 37 100.0 35 ..................................... GTAATTATTTTCGATTCCTATCTCTCTTAACCGCG 6406 37 100.0 37 ..................................... TTCGACCAAACATCTAGCACTGAGACAGGTACAGATA 6332 37 100.0 34 ..................................... GCTGCGAACACCCCCATAAACTTCAGCAGTCCAT 6261 37 100.0 39 ..................................... GTCTCACCTTCACCGCCACCCCCGACAAAGAAAACCAGA 6185 37 100.0 35 ..................................... GGCGCTCTTCTAGTCGATTCCGGTTTTTATCTTTA 6113 37 100.0 39 ..................................... AGTGAGATACTGGTCTCACTGGTAATCGCCTCTACCCTA 6037 37 100.0 40 ..................................... TGGTTCGGGATCAACCGCCGCCAACTGCGGGCGCTCACAA 5960 37 100.0 36 ..................................... TTTCTGATCTCTTTTTGAGAAATCAGGAAATATTTC 5887 37 100.0 38 ..................................... TTTGTCGATTGTAAACGTGAAGAATGCTCCAACTTCCC 5812 37 100.0 38 ..................................... TAGATAGCTTTGGCTATGGTTGGATTATTCAGCGATTA 5737 37 100.0 35 ..................................... CTCTATACTCTGGTGGGATATTAGGGGAAATTAAT 5665 37 100.0 37 ..................................... GATTGTAAACATCAAGAATATTCCAGCTTCCCCTCCT 5591 37 100.0 36 ..................................... GATGACTCGGTGTGATGAAGAAAAACAAGTAATCTA 5518 37 100.0 37 ..................................... GCTTATCCCATAAATCAGGGGGGCAATATTGGTTCTT 5444 37 100.0 36 ..................................... TTGTTCCTATTTCTAGCCCTATTGTCGTGAAACCTG 5371 37 100.0 39 ..................................... CTCTATACCCTGGTGGGATATTAGGGGAAATTGTTCCAA 5295 37 100.0 38 ..................................... TCGGACACTTTACCTTCGATTGCTTTTAATGTCGAACT 5220 37 100.0 35 ..................................... ATTGTATCCTTCTAGTATTTTCGATACAAAAGGGT 5148 37 100.0 37 ..................................... AAATAATCCTTATATATGGATTAGAGGTGTGCCGATT 5074 37 100.0 35 ..................................... AACGCTAATCGCATTGACTCCAATTCCAAAACAGC 5002 37 100.0 33 ..................................... TTTTTTGATTTAATTAATCCGACAACTAAGCGC 4932 37 100.0 36 ..................................... CACTGCTCCCAACTGATCACGCAAAAAAACTATCCT 4859 37 100.0 36 ..................................... AATGAATTGATTGTTGCTTTGATGCCTTCGTGGTTA 4786 37 100.0 33 ..................................... TGAGTGGCTGTGGTTTTTGTGCGAACCACAACG 4716 37 100.0 37 ..................................... GTCTTTCCGTAATCTTAGCCATATAACCCAAGGAACG 4642 37 100.0 36 ..................................... TCATAAACCTAAAACACTAGATTTGACTCCTAGACC 4569 37 100.0 34 ..................................... AAAAGCGACGCAATTGAGACTAACAAGCAACTTC 4498 37 100.0 36 ..................................... ACCCTCTACTACAAAATTAGAGGCTATAGCGATAGC 4425 37 100.0 34 ..................................... TATTAAGGGGATTGAAGAAAGGTTAAATAAGGTA 4354 37 100.0 37 ..................................... TTGCGTTTTCCTTTTAGTTAGCACCAATTCAATTCGA 4280 37 100.0 33 ..................................... TCTGAGTGTGATCTTGAGGGAAAAGCCTCTCTT 4210 37 100.0 36 ..................................... ATCCTTGCCATTGGGGATAACTGTTATGGGTAATTC 4137 37 100.0 33 ..................................... GGAGAGGGGGAATGTAGGGAGCTAGTGGGGGAG 4067 37 100.0 37 ..................................... CACGAGTATTGTATAATCGGCAAAAACTAAAGTTACA 3993 37 100.0 34 ..................................... ATCCTTACAGCTATTTTTTAATGATTAACTGGAA 3922 37 100.0 35 ..................................... TTTCATAAGCCGCTTCTATAACTTTATCAATCCAA 3850 37 100.0 35 ..................................... AGGGAACTTGATAAGAACCTCTTAAATGCCCAAAA 3778 37 100.0 36 ..................................... TTGCTTACTTTTCTAATATAGATCGATTCTCTCGAT 3705 37 100.0 37 ..................................... CGGATCGAAGGGGGAAAAAGACAAGCTTTTGGGGACT 3631 37 100.0 32 ..................................... TCTCGGGAATCCTCGGAATCCCCCTCTCCACC 3562 37 100.0 37 ..................................... ACGCCTAGGTTTTCGGCAATTACTGAAGTATCGAATT 3488 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 65 37 100.0 36 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : TTTGTTGTCAGTTACGATATTTCCGATGATAAGCGACGAACCAAAATTCACAATACGTTAAAGTCCTACGGCCAACGGGTGCAGTATAGTGTTTTTGAGTGCGATCTAACCGATACCCAGTACGCTAAGCTGCGCGGGCGCTTGAGTAAGTTGATCAAACCCGATACCGATAGCATCCGCTTTTATTTTCTCTGCGCCTGTTGTCGGGGTAAAGTGGAACGTATCGGTGGTGAGTTACCCCGGGATAATACAATTTTTTTTGTTTAGCTCGGTTGCGCTTCCGGGTAGCTGTAAAAATCCTTAACTATTATCTGGTGGCTGAAAAGCTTATGGAATATAGATTCGAGATGATTTTCCTTTCCAACGCGGGGCGCACCTTATCCCGTAAGGTTTTGCGGGGTCTTGAAGAACTGGGTCACTTGCTGTATGATTGGTTTATTGCGGGTGCGGCGCATACGAACCTTGAAAATCCCATAGCGTATAGCTTTTACCACTGGGCG # Right flank : TGGAACTTGAAACCTTCTAGTCTATTAATTTCAAAATGAGAATTGCTGTCAGTGAGTTTATCGAACTGCTTGCGTCCAAAATATCCTATAAATTAGAGGAAGTATAAGCTAATTTGTATTGATAGTAAATCTGTTTTTAATAGTATGAGCAACTCTCAATCGCACGCTAAAAACCTTCTCCCTTGTTCCTTCTCCCCACTTCCCCATACCTATTACCTAGCATCATTAGTATTCTATAATACCAATGCTTAGGAAACTATAAAGAAAATCCCAAGATTAGGCGAGTCCCTTGGCGAAAAAGGCTACAGTAGCATAAAATCCGTAATTTTATCTACAAAATTGTTATGACAGTTACCAATAGACAAGAGCTAGAAGAACTGATTCAACAGGTGAAAAAAGCTCAACAACAATTTGCCAACTATAGCCAAGAACAAGTAGATCTTATCTTCAAAAAAGCGGCATTAGCAGCCAACAACGCTCGCATTCCCTTGGCTAAAATG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA // Array 1 19666-20299 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFY01000053.1 Microcystis aeruginosa NIES-4285 contig_53, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 19666 36 100.0 40 .................................... GATTCAGCTTCGCTTAATTTAATCCAAGAAGTCGTAGAAA 19742 36 100.0 37 .................................... CTGTCAGACCACTGGAATTCGGCTTTTAGCCAATTCC 19815 36 100.0 38 .................................... ATCAACACGACCAGCGCGGCCGCCGTTACACCTAGATT 19889 36 100.0 38 .................................... GCTAATTAATTGATCTCCCATTCGCCACAAATCAGCGA 19963 36 100.0 40 .................................... GGCTCCGGCAACTCTTGGATCAAGACTATTCCCCAGTCCG 20039 36 100.0 39 .................................... GGGTAATTCGCCTGAATTGATTGGCTCATCACCATCAAG 20114 36 100.0 36 .................................... ATGAAAACAATAAACAATATCACTGCACAGACCACT 20186 36 100.0 42 .................................... TAAAAAAGTAGGGCTAATTCATGAATTAGCCCTACTCTTACT 20264 36 80.6 0 ...............T............AAC.T.GG | ========== ====== ====== ====== ==================================== ========================================== ================== 9 36 97.8 39 CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAAC # Left flank : AAATTGTCAGATCCCCCCGCCTATCGGCACCCCCCTTATCAAGGGGGGCAGGGGGGATCGAACCTAAAATCCATTTTTAATTTAATTATAACCAGCTACTTAATTACAGATAATTACTTGAGCAAAATTAATTACACATCCAGAGGCGGAAACTGTACGCTAAAGTAGTAGAAAGGGTCAATCCTCAAGAGGATGATGTGCGCTTCTATGGGATTTCCGAAGAAGCTGTCTCTAGATTGTTGGTGATGGGAGGTTCTCCTCCTCAACCACCCCCAAATCTCTACATCATCTAGCTTGTCCCCTAACTCTTGACTGAAAATCGATGCACCCCCTCCCCGACCTAAAACCCCGATTCTCTGGTTAGATGTGTCGATTGCTCTCCCAGTCAGGGTTCTACCCTTTGGTATCGGGACTTTTACCCCCCTCAATACCACCTTTTTGGAGATGCGTCGATTTGGGGGTCTGTCTTCCCCTCTCGATGAGACTTTCCAAGGGGTACT # Right flank : GTTGGGTTGAAGCATGAAACCCAACGCCCGATTATGTTACGCTACCGCTAACCCATCCTACAAATAATTGTGCCTACCTACTTAGGACATTCTGGGCGCACGCGATGCGCCCCTACCATTGGCACAATAATAATAATATTATTGTAGGGGCGAATTGCATTCGCCCAAATAATTGTGCCTACCTACTTAGGACATTCTGGGCGCACGCGATGCGCCCCTACCATTGGCACAATAATAATAATATTATTGTAGGGGCGAATTGCATTCGCCCAAATAATTGTGCCTACCTACTTAGGACATTCTGGGCGCACGCGATGCGCCCCTACCATTGGCACAATAATAATAATATTATTGTAGGGGCGAATTGCATTCGCCCTCTTTAATTAGAAACCCTTTTTCTAATAAATTGTGTCAAATATATCTTGACAAAAATCGATAAAAATGCTAATTAAATTACGAACAGCTTAATATGTCCCGTGGGAAACAGTGGGACAAAAGCG # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.90,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 19065-17972 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFY01000057.1 Microcystis aeruginosa NIES-4285 contig_57, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================================= ================== 19064 35 100.0 49 ................................... GCAATATCGACAATAGGCAGCACAGGCCAAAATACTCTTTTAACTTCTT 18980 35 100.0 41 ................................... AACAAGCTAACAGCGATAATGAAGGCAGGGACTTTAGCGCT 18904 35 100.0 37 ................................... CCACAGGCCCATATCATTCCGTGAATAATGTGGGCAA 18832 35 100.0 35 ................................... CAAGTTTTGCCCCGATGGATCAGAAACTATATCAC 18762 35 100.0 40 ................................... CAATAAAGCCCGCACCTCAAGCGTTCCCCCTCCCGTAACA 18687 35 100.0 40 ................................... TTTCTATCCCGTTGCTGCCCTCAAAATCGGAACACGACTT 18612 35 100.0 41 ................................... ACCACCCTACACATCAATGGCGGCCTGTTTACGGGGTAGGG 18536 35 100.0 46 ................................... CCCAACCAAGCGGCCCCCGTGCCTCCTATAAGGAGGAGGAATAGAA 18455 35 100.0 43 ................................... TTTTGGAGGAGGATGTTTTCAGCGAGTGACTTTCGCCACTCTT 18377 35 100.0 36 ................................... GCCGGACGCGATTCCCAAGGGTCTGTCCACCCCAAG 18306 35 100.0 43 ................................... GCCGATCAAAAGAAAGTGTGCCTCCTGTTTCCAGTTTGTACAC 18228 35 100.0 38 ................................... TCTTTCAGCCAAGCCTCTAGCTTGGTCTGCCCAGGCTG 18155 35 100.0 40 ................................... TTTTGTGAGGTGATCGAGTGACTCAAAGTGATAGTAGATT 18080 35 100.0 39 ................................... AATGTGTAGGGTTAATTCATGAATTAACCCTACAATTTT 18006 35 74.3 0 T..AA........A..T...T.CC.....A..... | ========== ====== ====== ====== =================================== ================================================= ================== 15 35 98.3 41 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : AGGAGGTTTATATTGGTAGCGCCGATTGGATGACGCGGAACCTGACTCGTCGCGTGGAAGCAGTGACACCCATCGATGAACCAGCGATCGCCAAGGAACTAGAAGAAATTCTCGGGATTATGTTGTCAGATAACCGACAAGCATGGGAATTACAATCCGATGGCAGTTATATTCAGCGTCGTGCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAAGCCCTTAAATCTGCGGGTATTAGTCCATAGGAACAGTGATCAGTTATTAGTTATTAGTTATCGGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGAAAATTATTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGTTTTGCAAAGCTAGT # Right flank : GATACTTAATTAAGAAAAATCAATGAAAATAAAGATTGTTTAAGAAAAATTATTTAAAATTAACACAATAATTAGAAATTTAGTGATAGATATAAAAGTACAAAAGAGCCAATTAATCTAACAATCCTATTTTTTTAGCCAGAGATAAGTCTTTTCTAGGTCTTTTCAAGGCTGTTGAATATACCTCTTAAACAATCGAGTTTTCTATAGCTTTATGCCCAAATATATAGCCATCACCTTCTCCCCCGTCCAAAGCTTTATTGAAAAATCCCGCAAATTGAGGGACCTGTACGGAGCCTCTCAGATTCTCTCGGATCTGACCAGTACAATCGTCACCCACCGGCCCGAGCAGTACCACCTAATTAGCCCCGGACTGCTAAACTCCCAACAGGGAATGCCCAACCGTGTTCTCCTGAAAATCGATAGCGAAATGCAGTCCTCCTCCTCCGAGGAAATCATTGCGGAACTGCAACGAGCCTTTTTAAATCGTTGGAAAAATA # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //