Array 1 349-49 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDOO010000006.1 Desulfosporosinus sp. SRJS8 NODE_6_length_195418_cov_43.350875, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 348 32 100.0 37 ................................ CTCTTGTGTTTATCCCATTCGACTGAGTAAAAGCATT 279 32 100.0 34 ................................ AAATGTATCACGCAGCATTAAAGCGTTAGTAGCC 213 32 100.0 34 ................................ TTTTATTTTGTAGAACCTTGAAATTAATAACCCC 147 32 100.0 35 ................................ TGATATACAATTTTTCATAAATGTTAAATAATCTT 80 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 5 32 100.0 35 GTCGCTTCCCACAGGGAAGCGTGGATTGAAAT # Left flank : TGACATTATTGCAATGCCAGTCCCACTTTGAAAGGCCTTTCAAAGTGGGACTGGCATTTTATATTGGTTGCCGGGGTCCAGTCTTCCATTTTGGCCACAATTACCGCACTTTCGATTGGCCCTTCCCATATAAGTCTCTTTCACAAGCTACCCTCCGCACCGGAGGCAGCCGGAAGTGAGGATCAGTACACCTTTCTTCCTGCCTGAGAGCAAGGTCACTATAATTTTGTTTGCGGTAGTATCAAAAAAACTACTAAGGAACAAGGTTTTGCAAGTATTTATGGCGAAGATATATACAAGGAAACTAGGATACAGTCATTATTTAGTGCTAGTGCGAATGTGTAGTGAACATAGAATTGCCGGGGGATTCGCACCGCGAAATAATAAAGATTTTATTGAAATATGGTAGGATATTGAATTTGTAATTGTAGTTTGTGACGAAAAGTTTAAGGAATTAAACTGAAATCTTCACAGAAGAGAGTTTTCTATTATTGTTTGCT # Right flank : TCTTATTTATTATTTATTTAATCATTATTTGGCATGTCGCTTCCCACAG # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTTCCCACAGGGAAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : NA // Array 2 10325-8431 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDOO010000006.1 Desulfosporosinus sp. SRJS8 NODE_6_length_195418_cov_43.350875, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 10324 32 100.0 35 ................................ CTTAATGATGTTAAATTCCTCTAATTCTAGTACAT 10257 32 100.0 34 ................................ TTTTTTTCCATGCCTTGCTTCATTTTTTCTTATC 10191 32 100.0 35 ................................ ACTTAACTAGTTTGCTTGCGAATAACTTGAGTTGA 10124 32 100.0 33 ................................ ATCTCTCGAGTCGTGCCTAAAATCTTTTCTTGC 10059 32 100.0 37 ................................ CTCACTTCATCAGCAGTCCTTAATTGCTTGCCGTCAA 9990 32 100.0 35 ................................ CTTGATTGGTACGATGCAAAAACCACATGATCTCG 9923 32 100.0 33 ................................ TTGGAATGCTCTCTGTTCACTCGTTGAGAATTT 9858 32 100.0 34 ................................ CTTTATCTCAAACAACTTGTCCACGTACTCAGCG 9792 32 100.0 35 ................................ TCCAATAGTTTCGATTGCTCCGACAGGTTTTACTT 9725 32 100.0 35 ................................ TCCGGCCACACCGAAGTTCGCATAAACTATTCCAT 9658 32 100.0 34 ................................ AGCTATTGATTCCCTCATCCCGCTACTTCCGTGC 9592 32 100.0 34 ................................ TAATATTGTTATTCATAAAATAATCACTCCTTAA 9526 32 100.0 35 ................................ CCATATGTACGAAAAAACCTTGCTACGTCACTTGT 9459 32 100.0 34 ................................ AATTACAGGAAAACAAAAGAGTCTATAAAGCTTT 9393 32 100.0 34 ................................ TTTCGTACACAAGCTATCAGCTTAGGTCAGCTAC 9327 32 100.0 36 ................................ TTTGCGGCTAGGCTGTCGATGTTTGCCGGGTTATTG 9259 32 100.0 35 ................................ TCCTGTGTGTTTTATATTCGTTGTACTGCTGTCGG 9192 32 100.0 34 ................................ TTTATGAGTGAGTCCATTTTATCTTTTTCCCATT 9126 32 100.0 35 ................................ ATACAAATCCCTCCTACAAATACAGATTTTCGTAC 9059 32 100.0 34 ................................ CTTTTACGGTCACTATCCCGAAAGAGGAAAGAGA 8993 32 100.0 35 ................................ AAGTGTAGAATGATTATAAGGACTTTGCTTAATTG 8926 32 100.0 34 ................................ ATTCTCTAAGATATGACAAGCGTAATCGTATAAA 8860 32 100.0 34 ................................ CTCCTTAACTTGATTTAGTGAATAGACCCGAAAC 8794 32 100.0 33 ................................ TAACATGGATACCTCGAAGCCAGTGTAAAACAA 8729 32 100.0 36 ................................ ACAGGTCTTGCCAAGCCAACGATTGCGGCATACACG 8661 32 100.0 35 ................................ TGTAACCAACCTTTTTGTATTCTCAACATTTTTCC 8594 32 100.0 34 ................................ TTCTGGTGCCGGGATTAGCGGCCCGGCCGGCAGA 8528 32 100.0 34 ................................ CTCTGTATATCCGCATGAAATTCTAGCTTTACGT 8462 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 29 32 100.0 35 GTCGCTCCCTACATGGGAGCGTGGATTGAAAT # Left flank : GACGCGTACCCAGCCTTTATGTGGAAGTAGGTGAGAGGGGATTTTAGTACTTATTACGTATGATGTAAATACTCAAACGGCGGAGGGTAGAAAGCGGTTGCGTCACGTTGCCAAGCAATGTGTGAACTATGGGCAGCGTGTTCAGAATTCGGTCTTTGAATGTGTGCTGGATGCGGCTAAATTCCGTGAGGTTCAGCATAAGTTGGAGAAGATTATTGATACGGAGAAGGATAGCTTGAGGTTTTATTTGCTGGGGAATAATTATAAGAATAAGGTTGAGCATGTAGGAGCCAAGGATTCCTTTGATGTTGAGGATACCTTGATCATTTAGTGCGAATGTGAAGCGAACATAAAATCCCTGGGGGATTCGCACCGCGAAATGGGAAGGAATTTGTTGGAATGTGCAGAAAATGCGGGGGATGGAGTGGCGTTTTTTGTGAAAAATACAAGAAGACTAATAAAATCTTTCAATTTAGAAGATAGTTTTATTAGTTTTTGCT # Right flank : TATAGTAGAGATTAAGAAATGCTAAGGAAGGTAAGAGTGCTTGTTTTAAAGTATTTTTAAAAACGTTGGTATGGAGATGATAAAAGCTTCCACATAGTTAAGCCGTGAATTATATTTGGCTCCTATAATGCCGGAAGAATTTAAAAGATGGTTTATCAGGCCGGAAATTACCGGGTTAACCAAGAAAAGCTCCGTTGACTATAACTTAGAACTCTAAACCCCTAAAGGAGTGTTTAGAACTTTGAATTTTAGTGATTTTAGATATGAAGGGCCATCCAAATTCGTCACTGGTAACGAATTTAGATGGCCCTTTACTGTCAGGGGAGGCAATCAGTTGCGTTCTATATTCTTGGAAGAGCTACATCAGAATAGGAAATGACCATATGCTTTAAAGGGTACCAGTCTGGAATCATTAATACCGTGAAGAATCAGGGGCGGAGCGTTTAATTATATAAAGAAAGCCAGAACATTGTCTAATAGTTTATCAATACGCTCCTGGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACATGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 24573-23541 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDOO010000006.1 Desulfosporosinus sp. SRJS8 NODE_6_length_195418_cov_43.350875, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 24572 32 100.0 35 ................................ CTTTGCATTTATTATCATTGCTCCATCTATCCATG 24505 32 100.0 35 ................................ GCTTATATTTTGCCTTATGACAAACGCCTGGCCTC 24438 32 100.0 34 ................................ AAGTTCTCCATCCTCATCAACTTTAGGATTTTCA 24372 32 100.0 34 ................................ CACTCAGCTTCCAGCTCACTCACAATCTTTTCTA 24306 32 100.0 35 ................................ TATCTAACGATGGTGATTCATCGTGTGCACTACCC 24239 32 100.0 35 ................................ CATCATTGACTTGGAACTTTACTCCGGCAAGCATC 24172 32 100.0 35 ................................ CTCATGTTAACTTTTTGGCAATCTCGTATATGACG 24105 32 100.0 35 ................................ AGTTGCTTATCTTGATATGCTTGATTCATCGAATA 24038 32 100.0 35 ................................ ACTCCTTTTTAGTTTAAATCTTCAAAGCCGTTCCA 23971 32 100.0 34 ................................ AAATATGCTTGTTTTCTTAATTTGATTTATTCGC 23905 32 100.0 34 ................................ TTAATCAAACTATAATGTCTGCGTTGGCGTGTTT 23839 32 100.0 34 ................................ TACACCCCTTGAACCTAATCAGCCTTACAGTATG 23773 32 100.0 35 ................................ TATTCTCCTTTTTACCATTAGGTTAATGTTACAAT 23706 32 100.0 34 ................................ ACTCTATAAGCACTTCCAACAATCAACCATCGAG 23640 32 100.0 36 ................................ TTATATAGTCTGAGATAGATTTATCGTTGATGGCTT 23572 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 16 32 100.0 35 GTCGCTTCCCACTGGGAAGCGTGGATTGAAAT # Left flank : GAAAAAGCAAGAACTGGTTGATCATTTTATAAGCTGGCTAGTTGATGAAAAACTATAGTTTCAGCTAGGAACTTCCGGGGAAGTTGGCATGGGATCTGAGGATTCCGCAGAGCGAGGCGATTATCAAGAAGAGTTTAAAACACTCCATGATCCTTGGCATGATTTTTTCAGACTAATGGGTGTGTTTTACGGATAATGAATATTGTTGGATGAAGATATTCTAAATATTGTTTGAGGATGTATCAAGAACCCACCAAGGAACAAGGCTTTGCAAGTATTTATGTCGAAGTTACATGTCAGGAAAGGAGAATGAGGTTACGAAAATCATTTAGTGCGAATGGGTAGTGAACATAAAAATGTCGGGAGATTCGCACCGAGAAATTATGAAGATTTTGCTGAAACATGGATAAATATTGGATCTGTGATTGTAGTGTGTGGCGAAAAGTTTGTTTAATTAAACAGGTATCTCTATGGGAGAGAAATTTTTTATTGTTTTTGCT # Right flank : TTAAAGCAAGTGTGCCTTAGTCTATGATAAGTCAGTCGCTTCCCATGGGAGCGTGAAATCTCCCTAGTCACGAATCTCAGATTGAAGCAAGCTACCCTAACAAAAGCCCTAGCTCACATTTGGCTGAACCTCAAACTTAGATCAAGAGGCCCAACCGGGAGGTAAGAGATTGAAAGAGGTATTTTGGACTTTTGATCATATCCTGATTGCCAAAAATTATTCAGACCCAGCTCCTCATAGGCATTTGGCCAAGCACTTGATTTTTTGTACTGAGGGAGAGGTTGAATGCAGGATCGAAAACTTACGGCTATTCGGTCGAGGGGTCTGCATCAATTCCAATATCGAACATACGGTCAAGGAGAATGGAAAGGAATTGCTGGTATTTCTCTTTGACGAGACAAGCAAGCTTTCTCGGGAATTAGAGACAAACTATTTAAAGGGAGAACCATGCTCCGTCATAGAGGATACCATAGCAGAAAAAGTCAATAAAGGCTGGAAAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTTCCCACTGGGAAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.77 Confidence: HIGH] # Array family : NA //