Array 1 28622-29311 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBYK01000063.1 Microtetraspora fusca strain NBRC 13915, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 28622 30 93.3 36 T.......................A..... CGCTCGCCGAGTCCGGCGGGCGCGTCAAGGCACGCG 28688 30 96.7 35 ........................A..... AGGCTGCCGCCGGGGAGCGACCACGAGCCGTCCGC 28753 30 100.0 36 .............................. GTGCCGTCCGATCTCACGGACCGGCCGGTAGTCCTC 28819 30 100.0 35 .............................. ACGGTGGCGGCGTACATCTCGCGCTCGGTGTGCTC 28884 30 100.0 36 .............................. AAGGTGAGCGCGCTGGGACAGATCAGGAACTCGACC 28950 30 100.0 38 .............................. ACCAGCGGGCAGGCTGCGGGTAGTCCATCCAATCCCCC 29018 30 96.7 35 ....................A......... ACGTCGTCGACCAGGTAGTGACCGGCAAGCCGCAG 29083 30 100.0 35 .............................. AATCGCACCTCGCGCACGCTGCACCCCGAGAAGAT 29148 30 100.0 37 .............................. GCGTAGCGGTTGATCGCGTCACGGGAGAACCCGGCGT 29215 30 100.0 36 .............................. TCCAGTTCTCGGGCGAGCTGCCACATATCGACGGGC 29281 30 83.3 0 ..........TT...G...........G.G | G [29306] ========== ====== ====== ====== ============================== ====================================== ================== 11 30 97.3 36 GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : CGGGCAGAACGACGAGCCACTGGCAAGGACAACCCGCGCCAACCTCGACAATGGGACAGCGACGGCCACATCCCCCGCCGATGGTTCCGCGACCAAGTATGGCGACCCGCACTGGCGGCCTCAGGCCTGGAGTTCAAGGTCAAGATGCACGACCTCCGCCACGCCCACGCCTCCTGGCTCCTCGCCGGCGGCGCCGACCTTCAGGTCGTCAAAGAACGTCTCGGCCACGGCAGCATCTCCACCACCGAGAAATACCTCCACACCCTCCCCGACGCCGACGAAACAGCCCTCGACGCTCTCACCCGCACACGATCACGTTCTCGAAGGTGAACAACAGCTCAATGCCACACGCGGCGATATCATTCAAGCGACACGTTCACCTAGGTGATCATGGCTGCTGCAGCAAACCTCCCGGGTTTTCTGCACAACCGGAGGTTCGCTGCAAAACACCGCCCGGGTCGCCGGGATAATAGGTCGCTAACCTGCGCCTTTATGCTGGG # Right flank : GCGCGGCCCGATGCGGGGGCTCTTTGGGAGCCGACTCGGCTCCCAAAGAGCACAGGTCCTCTCGGGCTCAGTCGCCCTTCAGGCGGAGGCTAGCGCACTGATCGGCGACCCAGTCCAGGTCCGCGAGCGTGACCAGGCGAACGAGGCGCCGCAGGAAACGCTCGGCCGCCATAACGCTGATCCCGAACTCGGTCATGGTCCAGGGGATGATCTCGGTGCCGTCCGGAGGAACATCACCGGAAAGTCGGGCAAGGAGTTCCTGACAACGCGCGCGTGTCCGCGGCCCGGCCACCAACAGCTTGTTCAGCGTCCGCCGAGCTGATTCCTTCGCTTCCTCGAGGATGAACGTCTCCTCCGGCCCCTGCTGGGAAGTAGCGCCGGGAATCAGGGCTTCCTCCCCCAGGTACCCGGCCACATTGGCCGCGTAGAAGCCCGGGCGGAGGGTGCGGAGACGCTCCAGCGACTCACGCAGCATGCGCCGTGCGGCCGGCGGGTCCAGC # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 44236-42698 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBYK01000063.1 Microtetraspora fusca strain NBRC 13915, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 44235 30 100.0 36 .............................. CGGTTCTGTCCTGGGATCGGGATGGCAGGGGCAGTC 44169 30 100.0 35 .............................. AGGGAATCGCAACGGCTGTTTCCGCAATCGTTGCG 44104 30 100.0 36 .............................. GTCAGCAGGTCCCGCGTCTCCTCGGGAGCGGCGGAA 44038 30 100.0 35 .............................. GTGACCTCACCCCCGCCCAGGCCGCTGGCCTCGCC 43973 30 100.0 35 .............................. AAGCGCGGTACGGAGCTGCTGGCCGAGGCTCGGCG 43908 30 100.0 37 .............................. CGGCAAACCGGGGCGGCAAGGGCAGCAAGGGAATCGC 43841 30 100.0 37 .............................. GCTTAGAAGGGGTAGCCGTCAGCGATTCGCTGCTGGT 43774 30 100.0 37 .............................. ATGGCGCTGGCCATCGAGATGGGCGAGGACCTTCCCC 43707 30 100.0 34 .............................. CGGCCTGTACGAGTCCGACCAGGCCGTCAAAGAG 43643 30 100.0 36 .............................. TCGGCCTGCTTCTTGGCGTCCCGGACCAGCTCCGTC 43577 30 100.0 37 .............................. ACCCGGCCGACCGGCCCGGCGGGAGCCGTACAGACGT 43510 30 100.0 37 .............................. CGGAGCGCCATCCGTGTTCCGGGCTGTTGGAGTGCGA 43443 30 100.0 36 .............................. ATGTCCCGCCCCCGGGTGGCCATGTCCCGTTCCGTC 43377 30 93.3 36 ..........T..............T.... GAGCAAGCGCGCCGCGGAGGAGCAGCGCGCGTCTTG 43311 30 96.7 34 .........A.................... GCCCAGTAACGGACGCTGTAGGACTCGGTCACCT 43247 30 96.7 37 ...............G.............. TTGCTTGCCTCATCCAGCACCGCGTGCAGGATCGGGT 43180 30 93.3 35 ........T.........G........... ATTGCTGTAGAAACTGGCGTCGGCCATCGGGACGG 43115 30 100.0 37 .............................. ATGTGGCAGTGGGCTGTGGTCCGGCGGGCGAGGACGG 43048 30 96.7 33 ...............G.............. ATGGTGAGGTTCGCTCTTGTGGTGGCCATGCGT 42985 30 93.3 35 ...............GT............. TTGATCCACGCAACCCACCCTGACGGGGCCTCCTC 42920 30 90.0 35 ..G............GT............. GCCGGGGCGTGGGAGGGAAGCTGCGGAACGGCCTG 42855 30 80.0 32 ..AG.....AT....GT............. ATGACGGTGGGGAGTCGGCATAGATCGTGGTC 42793 30 86.7 36 .........A.....GT.......T..... GCGGTGAGGGTCGGGCATCCGGGCTTGGCCATCATG 42727 30 86.7 0 ...A......T.....T.......T..... | ========== ====== ====== ====== ============================== ===================================== ================== 24 30 96.4 36 GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : CCTGCGTCGCGGAGCCTTCGGGAACACCGGCGCGCCGTGCCCCAGCGGCACCATTCCGTACGGCCCGGCCCCCTGGTAATGCAGTTGTCGTCCGATGTCGGGTGCCTCATGGGCCAGCAGGTCGTACGCCAGGGACCGCCCCGGTGCCAGAACCTTCGCCCACGCGAGCTCGGTCACCGCCGTCGCGACCTCGATCCGCAACCTCACTGCTCCGCCTCCCGTTTGCTTCGCCGTTCACCCTGTACAGATGGACGACGACTTCGTAGAGGAGGCAGGTGACTGTTTGCCGAGGTCAGAGTGTTAATGGATCAGAGATCGACGAGTGCTGGTTCCGTGAGGACGCACCTCGGGCTAATCTTCGTTCGCGATGTCGTCGACGGGGGTGTGGATCATGCTTTTGCAGCAGACCTCCCGGGTTTTTTGCACAACCGGAGGTTCACTGCAAAACGGCGCCGATTTCGGCTTCGCTTGTGCTCATTGACCTGCACCTTTACGGTGGG # Right flank : ATCTCCGTCCGGTACTCCGCCATGGTCGGCAGGCCCGCCGTTCGCATCGCCCTGTGAGAGGCGACGTCGGCGGGTCGTCGGCTACCAGGGCTAGTTGCTATTCGTATCCATCTCGTCGCCTTTCGTGTCGTCCATCTGTATTGGGTGAAGGCGGAAATGTGGGGCGGAGAGGACGACTGGATGGGGCTTTCCCGGGCTGGGACGACGGGCAGGGCGAGAGCGGCGATGGAGGGTGCGTCGCGGTGGAGCGTGGCGGCCCTCGCAGGTGTCGCGGCGGCGGTCGCCGCCGGCACGGTGCCGGACGTGATCAAGAGCTGGCTGGGCGACCAGCGGGGCTTCCTCACAGCGCTGTGCGTCGCGTCGGCGGCGGTGTTCGCAGGCATCAACCTGTGGCAGCAGCACAGCAAGGGCGTGGGCATCGTGATCGCCCTGCCGAGGGCGAACTGGCGAGCGCCGTGGAGCGGCCAGTGGGCCGCCGCCGCGGTTGCCCACGCGAGGCG # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 3 52596-53940 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBYK01000063.1 Microtetraspora fusca strain NBRC 13915, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 52596 30 100.0 39 .............................. CCGGTATTCGCGAAATATCGCAGCCCAATCCCCGCGCGC 52665 30 100.0 35 .............................. TTCTCTGCAGCGGCGCTCTTCTCGGCCTGCTGGAG 52730 30 100.0 37 .............................. CGGTGGATGGTGGTGGCAATGAACGACCCCAAGACCG 52797 30 100.0 35 .............................. AGTGAGACATAGAACCAACCGAGGTACAGAGAGAA 52862 30 96.7 34 ..........................T... CGGCCTTGGCCTTCAGGTCGCCGTAGTCGGCGAA 52926 30 100.0 36 .............................. GCGAGCAGTCGCTCGCCCTCGCGGTAGTGGTCGGGG 52992 30 100.0 35 .............................. GCGTTGTCCCAGGTTCGGCCTGCCGAATTTCCGAG 53057 30 96.7 35 ...........T.................. ATCCGGGATGGGACGAGAGAGATGTTTCCGGCCCA 53122 29 96.7 34 ......................-....... AAGCAGGCGGCCGAGCAGCGGCACGTGCGCCGTA 53185 30 100.0 35 .............................. TCGAACTCGTCGGAGTCGCCGAACGGATCGCGGGT 53250 30 100.0 36 .............................. CTGGTAGCGCGGTCGGTAACCGGGTTGGGCAGAAGA 53316 30 100.0 35 .............................. ACTGACAAAGGGGGGTACCGGATGGCGAACCGAAT 53381 30 100.0 37 .............................. CCGCGAAGGACAGGCCATGACCAAGAACAGCGCCCGC 53448 30 96.7 38 ...............C.............. GCTGATGCCCGCCCGCATGATCAAGGTCCGGCCGAAGA 53516 30 96.7 35 .....A........................ ATCTCCTTCGCCCAGGCGTCAATCTCCGCCTGGCA 53581 30 100.0 36 .............................. CCGAGCTGCTGCAGCAGGCCGAGCAGCTCGACGGTG 53647 29 96.7 36 ..........-................... TAGACGATGCCGACCTGGTCCGGCTCAGGGGAGGTG 53712 30 93.3 33 ..G..........T................ GTGGCTCGTGTGCCGCGAGCGAGCGTGTGTGTG 53775 30 96.7 35 ........................T..... AGGAACGTCATCGTCACGCCTTCGCGGGTGACGGA 53840 30 100.0 42 .............................. CTGGGACGTGACCCGTCCACCGCCTCCCAAGTCGAGAGCGAT 53912 29 76.7 0 ............T.-.T...A.A.G....T | ========== ====== ====== ====== ============================== ========================================== ================== 21 30 97.5 36 GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : CCGGCGTGGCATACGACGAGCTGCTCTATCTCGAAGCCCTCCAGCTCACTCGCACATGCCTGGAAGGAACGCCGTACAAGCCGTTCAAGATCTGGTGGTGAGGTCACATGTATGTCGTGGTCGTCTACGACACCCTGGCGAAACGCAACGCCGCCATCCTGCGCCTGTGCCGCCAATACCTCCATCACGTACAAAGAAGCGTCTTCGAGGGCGCGCTGAGCGCGGCACAGCTCCGGCGTTTTCGCCATGCGGTCGAGGATGTGATCGACGCCGGATACGACAGCGTGCTCGTCTTCACATTCCCGCCCGGTACGACTCCGGAGCGCCAGGAATGGGGCATCGCCCAGCCCGCACCCAGCGATATCCTGTGATCGGACATGCAATTTGATCATGAGATTTGCAGCAGACCTCCCGGGTTTTCTGCACAACCGAAGGTTCGCTGCAAAACACCGCACGTGGCCCACGATAATCAGGCCAGTGACCTGCGCCTTTACCGTGGG # Right flank : TTTGCCTGGCGCATCACATCGAGGGGTTCTCATCAACTATCTGGGAAGCAGAGCGCGGTCAGCGGTGATGCAGACGCCGTCGTGGGCTCGTACAGCGGGCGACGGCAGGGCATGGATGGCGTCCAGGACGCGGACGGCGTAGGCCTCGGTGGCCAGGTCGCGTACCTCGTCGGCGGTTGCCCAGCGGAACGCGCGGGCCTCGTCGTTCACGCTCAACTCTCCGCCGACGGCCTCGCAGCGGAAGACGAGGGCGATGATGCCGCGGGTCATGTTCTTGTACACGCCGGTCATCGCGTGAGGGACCACTTCAAGGCCGGTCTCTTCGCGGACCTCGCGTAGCAGGCCGGAGATGATGTCCTCGTCGCGCTCCAGGACTCCGCCGGGCGCCTCCCAGTGGCCGTTGTCGCGGCGCTGGATCAGCAGAGCCCGGCCCTGTCCGTCGAGGATCACGCCGGACACACTGACCGAGTGCATGTTCGGATGATCCATCCCAGACCTCC # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.97, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //