Array 1 306401-307544 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANKQ01000001.1 Microcystis aeruginosa TAIHU98 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================== ================== 306401 35 100.0 39 ................................... TCTCGGTCCCACTCCCACTGCAGGTCGGCTTCCTTACAA 306475 35 100.0 35 ................................... CCCAGGTCCTCCCACTCCTCTGTTTCCAATCGGAG 306545 35 100.0 40 ................................... CCAAAAGCGCCCAACCACCCACCTTTACGGTCGGTTGCAA 306620 35 100.0 38 ................................... CTGGGACATTGGCAATGGTTTTGAGGTCCATAATTGGT 306693 35 100.0 41 ................................... CTAGACGACGTTTCTATCAGCTTTATCAGCGGCGTAGTCGT 306769 35 100.0 38 ................................... TCATGGCGGCGCTTCCCTGCTTATGCATGGGGGATAAA 306842 35 100.0 37 ................................... ACAATTTCCCCAATCTCCCTGACCCGCGCAAGGGGGT 306914 35 100.0 43 ................................... GTCAAGGGTAGTGCTTTTTCGATGCCCTTTCTAACGAGGGACA 306992 35 100.0 35 ................................... CCTAATCTAGCAAAAAGAAATGCAGATAAAAACAT 307062 35 100.0 40 ................................... TCTGCTAAATAGTCCATTATTGCGGACTCTAATCTTGCTT 307137 35 97.1 38 ...............C................... CCGGCAATTTTTTTCATTGAAAAATATAAACAAGTGAA 307210 35 100.0 40 ................................... TGTGGAGGTTACCTAGGACGGCCAGAAACAAAGCGACAAA 307285 35 100.0 35 ................................... ACTTTCAGTGTCCCGAGGGGGAAAACTATATCAAC 307355 35 100.0 46 ................................... CAAGCAAGTAAAGCCAACAAGGTAAAGCCTTTAACTCTGTTAAAGG 307436 35 100.0 39 ................................... GATGTGTAGGGTTAATTCATGAATTAACCCTACAATTTT 307510 35 82.9 0 T..AA........AA.T.................. | ========== ====== ====== ====== =================================== ============================================== ================== 16 35 98.8 39 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : AGGAGGTTTATATTGGTAGCGCCGATTGGATGACGCGGAACCTGACTCGTCGCGTGGAAGCAGTGACACCCATTGATGAACCAGCGATCGCCAAGGAACTGGAAGAAATTCTCGGGATTATGTTGTCAGATAACCGACAAGCATGGGAATTACAATCCGATGGCAGTTATATTCAGCGTCGTGCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAGACCCTTAAATCTGCGGGTATTAGTCCATAGGAACAGTGATCAGTTATTAGTTATTAGTTATCGGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGAAAATTATTATTAATAATGTCTATGCTTTTCAGTATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGTTTTGCAAAGCTAGT # Right flank : CAGAATGCCAGGGATCAATCCCATCTCATCGGTTAAGAAAAATCCGAGATTTCAGCGAGATTATGCGTCAGTGGAGACAACAATTTCAGAGGAACTTTAACCAGACTGAACTCGGCAGAATAATTTATGCGGGAGGAGATGATTTTTTGGGCATCGTTTATAATAGCCAATTTCCCGGTCCACAACTCAACTCGATCGATCTCGATCGAGTTCTCCACTGGCTACAAACCCCTCATAAGTAGGGTTTGCTGAATAAATGTGAAATGTAGGCAAGGTCAGGGTTTTGTGGCTTTTCTCGTGAAACAGGTGCAAGATTTTGAGAGAATCGTGCTTCAAAACCTTGCGTCTTCATCGGCCCGCGTCCTGTAGGGGCGAAGCATTCGGGCAGTAACCTATCGGTGAAACCGTAGATTTTCTATCCCAATGCTTCGCCCGTACTTTTTCAGCAAACCCTAAGTAGCGATCGCACTTTCAAAAGACCAAATAATCACATTTAAAGG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 310200-311553 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANKQ01000001.1 Microcystis aeruginosa TAIHU98 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =========================================== ================== 310200 35 100.0 33 ................................... TGGGTATGCTGAACGACAGTTCACTGACACCTT 310268 35 100.0 37 ................................... GTTTTCCAAGAGGCAGTTGTGCCACTCTTCCACCGTA 310340 35 100.0 35 ................................... TTTGACTTTATATTCGGTAATTCGCATACCGCCGG 310410 35 100.0 41 ................................... AAAAGATACATGGCAAGAAAGAGCCAGAAGGTCTGGCGCTC 310486 35 100.0 36 ................................... CCGATCCAACCAATTCTCCAGTGGCTTTTATTCCTT 310557 35 100.0 39 ................................... GTTACTATTTGTATCCACAGGACGATTCCTTTTCCTCCT 310631 35 100.0 40 ................................... CGCATAAAGCCCGGGCGTCAGAAGCGCTTTTAAAATCCAG 310706 35 100.0 43 ................................... CCTCCGTATTCGCTGACCAGATCGACTAAATCAGTAACAACTT 310784 35 100.0 42 ................................... TCTTGTCCTGATAGCAACGAAAAACAGCTTTTAGTTGCTAAA 310861 35 100.0 34 ................................... AATAGAGAATTTTTTCGCAAAACCACCCTTGTGA 310930 35 100.0 37 ................................... CCCCCGGTCACTCGGTAGCGACTGCGGAAGCTAAGTT 311002 35 100.0 35 ................................... CTCTATTCCCATATATCCGATTAACACACCAAAAC 311072 35 100.0 40 ................................... TACACTTCTTGTTCGTGCCAATCGCGGAGGTTTTTCTCTC 311147 35 100.0 43 ................................... GCCGATCAAAAGAAAGTGTGCCTCCTGTTTCCAGTTTGTACAC 311225 35 100.0 36 ................................... TTAATATCGGTGTATTTCAGCTTATTAAGGATGCGA 311296 35 100.0 37 ................................... TGCTCTTGTACGGTGATGTACCCGAGCTTTTGGAGAG 311368 35 100.0 42 ................................... AAGAAGTTATTCCGGGGAATCCGTTCGTAGTTTTCAAGGATA 311445 35 97.1 39 ..................................A GATGTGTAGGGTTAACTCATGAATTAACCCTACAATTTT 311519 35 77.1 0 T..AA........A..T......C.....AT.... | ========== ====== ====== ====== =================================== =========================================== ================== 19 35 98.6 38 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : CTATTCCTCATCATCAAAAAGCGATGTCGTGCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGAAAAAGCCCTTAAATCTGCGGGTATTAGTCCATAGGATCAGTTATCAGTTATTAGTTAAGTAGGTAGGCGTTAAAAGTTGTCAGATGCCCCCCTTATTAAGGGGGGATTAAAGGGGGGGACTAAGGGGGGATCGGCACCCCCCTTATCAAGGGGGGCAGGGGGGATCGAACCTAAAATCCATTTTTAATTTAATTATAACCAGCTACTTATCAGTTATCAGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGAAAATTATTATTAATAATGTCTATGCTTTTCAGTATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGCTTTGCAAAGCTAGT # Right flank : CGATGCTTAATTAATAAAAATCAATAAAAATAAAGATTGTTTAAGAAAAATTATTTAAAATTAACATAATAATTAGAAATTTAGTGATAGATATAAAAGTACAAAAGAGCCAATTAATCTAACAATCCTATTTTTTTAGCCAGAGATAAGTCTTTTCTAGGTCTTTTCAAGGCTGTTGAATATACCTCTTAAACAATCGAGTTTTCTATAGCTTTATGTCCAAATATATAGCCATCACCTTCTCCCCCGTCCAAAGCTTTATTGAAAAATCCCGCAAATTGAGGGACCTGTACGGAGCCTCTCAGATTCTCTCGGATCTGACCAGTACAATCGTCACCCACCGGCCCGAGCAGTACCACCTAATTAGCCCCGGACTCCTAAACTCCCAACAGGGAATGCCCAACCGTGTTCTCCTGAAAATCGATAGCGAAATGCAGTCCTCCTCCTCCGAGGAAATCATTGCGGAACTGCAACGAGCCTTTTTAAATCGTTGGAAAAAT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 1341494-1341811 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANKQ01000002.1 Microcystis aeruginosa TAIHU98 contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 1341494 36 100.0 35 .................................... CAGATAAATTTTGGTGGGGAAGATAAAATCCCTGG 1341565 36 100.0 34 .................................... GGCTGATCGTTATCTTGATGCTTTGGGCTTGCGA 1341635 36 100.0 33 .................................... TCAGGCGTACCGTTTCGTCGTTAATCGTCCTTT 1341704 36 100.0 36 .................................... GACCGAGACCCCAACAGTTCCCTCTGCCCTGATCAA 1341776 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================== ================== 5 36 100.0 35 GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Left flank : CGATATTCCCGCTCAAAAGGTCGCTTGGGGAAGTCCCTGTCGTCCTCAATACGATAGAAAGATGAATTCTTATAGTAGTTAAGCTAAGAGGCATTTTTGGCGGTCTTCCGCTCGCTTTTGCCCCACTGTTTCCCACGGGTCATATTAAGCTGTTCGTAATTTAATTAGCATTTTTATCGATTTTTGTCAAGATATATTTGACACAATTTATTAGAAAAAGGGTTTATAATTAAAGAGGGCGAATGCAATTCGCCCCTACAATAATATTATTATTATTGTGCCAATGGTAGGGGCGCATCGCGTGCGCCCAGAATGTCCTAAGTAGGTAGGCACAATTATTTGTAGGATGGGTTAGCGGTAGCGTAACATAATCGGGCGTTGGGTTTCATGCTTCAACCCAACCTACGTTCATTTTATATTTAATTCCACCCACCTACTTATAGATATTTCGACAAAATTGAAAGGCAGAAAAAGGGTTTCTTTTAGAAACCCTTTTTCTA # Right flank : GAGTACCCCTTGGAAAGTCTCATCGAGAGGGGAAGACAGACCCCCAAATCGACGCACCTGCAAAAAGAGGGTTAAAAGGTGGTATTGGGGGGGGTAAAAGTCCCGATACCAAAGGGTAGAACCCTGACTGGGAGAGCAATCGACGCACCTCAACCAGAGAATCGGGGTTTTAGGTCGGGGAGGGGGTGCATCGATTTTCAGTCAAGAGTTAGGGGACAAGCTAGATGATGTAGAGATTTGGGGGTGGTTGAGGAGGAGAACCTCCCATCACCAACAATCTAGAGACAGCTTCTTCGGAAATCCCATAGAAGCGCACATCATCCTCTTGAGGATTGACCCTTTCTACTACTTTAGCGTACAGTTTCCGCCTCTGGATGTGTAATTAATTTTGCTTAAGTAATTATCTGTAATTAAGTAGCTGGTTATAATTAAATTAAAAATGGATTTTAGGTTCGATCCCCCCTGCCCCCCTTGATAAGGGGGGTGCCGATAGGCGGGGG # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 2 1479390-1480449 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANKQ01000002.1 Microcystis aeruginosa TAIHU98 contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1479390 37 100.0 36 ..................................... CGTCATAATTAATCTCCTTTTCCTGTTTGTCTATGA 1479463 37 97.3 40 ....................................C AGTTTTCGCAAAAATAAGCCATTTTGTCGTCCGATAAAGT 1479540 37 100.0 36 ..................................... TCCATACCCTAAAAAAGATGATGCCAAACAAACTAA 1479613 37 100.0 36 ..................................... TGGCAAAAAGAACTTGATTCAAGCAAAATTCAGTTT 1479686 37 100.0 37 ..................................... TTCGCGACACGCATACCAGTAATCAATGTCGTTCTTT 1479760 37 97.3 36 ....................................A TCCAGTCGGCCATTTGTTTAAAGTCCATTTGTTCGC 1479833 37 100.0 36 ..................................... TGAATCACAACGCTGGGTATTGGTCTCGAAGAAAAT 1479906 37 100.0 36 ..................................... CCTCTAGTTTTCGCTCGATTTGTAGTTCTCGCCAAA 1479979 37 100.0 35 ..................................... CGGATGGAATTTCAATAGATTCTTCCGTCGTTTTC 1480051 37 100.0 35 ..................................... CAATCTCAATCATTGCTTTACTCCTAAGTTATTTT 1480123 37 100.0 34 ..................................... CGATAGATTGATTTTCAGGCGCTTGGGTGTGGCG 1480194 37 100.0 36 ..................................... CATTATCACCTCCCCAACTGGTAAAAAAGCTTAATT 1480267 37 100.0 37 ..................................... AAGCATAGGTTAGGATCAGATTTGGTTTTATGTTTCT 1480341 37 100.0 34 ..................................... TGTCAGGGTATGGATGCTTCGCTTTTTCGGTATC 1480412 37 73.0 0 .........A..CTT...............CTCCC.C | A [1480424] ========== ====== ====== ====== ===================================== ======================================== ================== 15 37 97.8 36 CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAACT # Left flank : TACTTCTGTTAATGCGTTGTGATCTTTCCCCGAATGGCAATTTTCCGAGGGATCAAGGGTTTGATAACCGACTCCGGGGTGTCGGACGAGGGTGGCGATCAGGAGCATAAGTCGCTGGAACTCGCGACTATCTCGTTCACGCAGTGTTCTTTCCCTAGGGGATTTGGGGTGCTGAGTCATACAGATGCAATCGGTTCAGTCAAGGGGAAAGCCGATATAAATTTACCTCACTCCGAGGGCTAGAAAATCCGATCAGGACTGGAAAAATTAGCCGCTCGATCGAGGGGTTAAATTATTGGCTTTTTAGGGTATCATCGACTAGCGACGGATAGGGGTGGGAGCAGATAACCTCGGTTTCCGGTAAAATCCCTCGATCTACCACGGGATAAGGGTTTTGTGGTTTATGGGGTTGACTGTGCGACCGTATCTAGCTATAATTAACTTATCCGTCGCAACTGGCTTCCGAACCCCAATCCTGTTCGGACGTTTGCCTACCGGCT # Right flank : CAATCCCTTTCCTGTTGACCCTTGCAAAAGTGCCTCATCTCAACAGACGATTTAAATGCGCGGGCAGCTTATTCTATATGGTAATGTTTAATTTTATTCGCGTAAAAGTTGCTTATGTCCTTACCTGAACTCCCTCTTCATCTTCAATTAACCCAAATGGTTTCCGGTTACTGGCTATCTCAGGCCATCTATGCCGCGGCTAAATTAAGTCTAGCCGAGCATTTGAGCAAAGGAACGAAATCTTGTCAAGATTTGGCCTCCCTAACTGAGACTAATCCTGCTGCTTTATACCGACTGATGAGAGCATTAGCTAGTGTGGGAATTTTTCAAGAAACTGAATCTCAACAGTTTATACTAACTCCCTTAGCCGAACATTTATCTAGTGACCATCCCCGGTCAGTAAAAGCGACAGCGATTATGTTAGGAGAAGCCCCCCATTATCAAGCCTGGGGAAATGTGTTACATAGTATTAAAACGGGACAACCATCCTTTGATGATGT # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 584349-587638 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANKQ01000003.1 Microcystis aeruginosa TAIHU98 contig3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 584349 37 100.0 34 ..................................... AATCCAGCGCAATTAAGTGAAATGATGGGCGATG 584420 37 100.0 33 ..................................... ATGGGCAAGGTTAGCTATTCTGATGGACAGTTT 584490 37 100.0 34 ..................................... AAAGTGGCATTCTGAAAGTCTAGAATTTCTGAAC 584561 37 100.0 34 ..................................... AGCACCCATAGCTTCCGGCGAACTGCTCTAACCC 584632 37 100.0 35 ..................................... AAGAATTGCTTGGCTGCGAGATTGTCGGTAAGCTC 584704 37 100.0 35 ..................................... ATTCCCAAATCACGCGACACATAAAGCGTTGCATT 584776 37 100.0 35 ..................................... CTTTTTATGGCCCTTATTTGGGCGATTACATTGAT 584848 37 100.0 36 ..................................... AGCGAATACACCAACGAAGTAACTGGACTTCATAAA 584921 37 100.0 38 ..................................... TTTGAAGGTGATGCTATTTATAAACTATCAGGTACAGC 584996 37 97.3 34 ....................................A GGGTGTGGAGACTTATGAGCTACTGGATAATGGC 585067 37 100.0 35 ..................................... GCCGTCTCCGAACCCTAATGGCGCGACTAATTCCG 585139 37 97.3 35 .....................C............... TAGAATTAATCCCCCCTCCTACTCCTAGTCCTGAC 585211 37 100.0 34 ..................................... GCTAAAGATTTTAGCGACACTCTTAAGGATAAGT 585282 37 100.0 34 ..................................... TAGGGGGATTTTGGGAATTGCTTATCCGACTCTT 585353 37 100.0 35 ..................................... AGCGTCATCATCGGTAAACAGCGAGATTAGGGCAT 585425 37 100.0 37 ..................................... TTAAATTTGATAAAATACAGTAAAGCCAAGAGGTAAT 585499 37 100.0 38 ..................................... ATTCAATCCGTAATTTTTCCAGGAGCGGATCATACCCG 585574 37 100.0 34 ..................................... GCTTGCCAGTTGCCGGTGGGTGGGTCCCCTCTGG 585645 37 97.3 31 ............................A........ CAAAATCGAGCTGGGCCGCCTCAGTGAGGCG 585713 37 100.0 41 ..................................... TTTCTTCTAGATTCCCTTCGGGCTGGGTCTTTGGGGCTATG 585791 37 100.0 36 ..................................... AAGTTTTCCGATGAAGCGCGATCGCAACGGCCAAGC 585864 37 100.0 34 ..................................... ATGAGTGCTAATAATCCGAACTTGGCCGCCCCAC 585935 37 100.0 35 ..................................... ATCGATGCCAAGACAGACTCCCGGCGCTCGCTAAT 586007 37 100.0 33 ..................................... GCTCTCCTAATGCCACTTCATCTTAGGGCAAAT 586077 37 100.0 35 ..................................... CCATTTCTCCAACCAAGCAAGAGGATAGGCAAATT 586149 37 100.0 40 ..................................... ATTGATGCTAAGACAGACTCCCGGCGCTCGCTAATTTAGT 586226 37 100.0 34 ..................................... ATAACGTAATCGGGGAGGCGATCGATCATTATAC 586297 37 100.0 33 ..................................... GGGGAAGTCGAACGGATGTGCTTTTTTCAGTGG 586367 37 100.0 34 ..................................... CTCAGATTCACACTGAACAGCCCATTGATGTGGG 586438 37 100.0 36 ..................................... ACGATAATGCGATCGAGTCGTTCGGGATTCGCGATT 586511 37 100.0 35 ..................................... ACGGCCATCGGGTGGTGGTGGGGGTGAATCCTTTA 586583 37 100.0 34 ..................................... CACTTTTGGGAGCAAGCTTTACGAATAGCAAAAC 586654 37 100.0 35 ..................................... CGGCTTCTCAGTCCCGCTTGCACCTCCGCAATTAC 586726 37 100.0 34 ..................................... TTTCGCCTTGGGCGATCGCTTGCTCTAGTTGGTC 586797 37 100.0 34 ..................................... AGAACGGCAATTCAATCAATCATGACCAACGGGC 586868 37 100.0 36 ..................................... CCGCCATCAGCAAAACCAGGAATCGGCAACTTCAAC 586941 37 100.0 34 ..................................... ATCGCCCGATTTTTCGACATCAAGGAAATTACCC 587012 37 100.0 34 ..................................... ACGGCTGATAATGTTCCGGAGGCTGTGGGCAGAA 587083 37 100.0 36 ..................................... AGTAAAGTAAATGGAATCATGGTAAATTAGGCAATC 587156 37 100.0 35 ..................................... CGCGGTACTCGGATATATGGCGATCGATTTCTTGG 587228 37 100.0 34 ..................................... AAATCGCCCCCTGCGAACTGCTCACCGGGGAAAC 587299 37 100.0 37 ..................................... ACTCGAAAATTGTCCATATTTGCGCCCCAGCAATAGG 587373 37 100.0 40 ..................................... AGTATTGAATCTATTCAAAGACATTTACAGGACTTAAGAG 587450 37 100.0 35 ..................................... CTCAGAAAGTGTTAGGCGGCCTACCTTCGCCTCTA 587522 37 100.0 43 ..................................... CATAAAAGTGCCTCCTTTATTCCGGCTTCTAGAGCCTCTTCGA 587602 37 97.3 0 ..............C...................... | ========== ====== ====== ====== ===================================== =========================================== ================== 46 37 99.8 35 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : AAAGCTTTTTTTCCTTTTAAACGGAAGTTTCCCGATTGTAAAAGCATTTTTTCCGTCTTATTTACAATCCGACATATAGTTGATTCTGATAGTTCCCAGCTTGTACCAATGTGAAAATATGTTCTATATTCTCGCCAATATTCTAACGTTACTAAAACTTGTTCTTCTATAGATAGTTTAGGTTTCGGTCCCCTTTTAGATGGTGAATTAGAGTCGGCTTCAACACTTTTTACTGATTCTACCATCTTTCTATAGGTTTGTTTGTACACACCGAAACGGCGTTTGAATTGTTCATCTGATAAGTTTTGATAATCCATAATTTTGCTAATAAACATAGCAAAATTATAGATGATTTCCTGACCTAAGATCACATTTTATTCTTTTTTCCACTTCAATCTAAGAATTGAGAAAAAAGCAAAACCTTATATTATACCATAAAAAAATTATGCAAGAGGTCTATTGAAACAATCGGCGGGATTGGCCCGAAAGCTGCCGACAAA # Right flank : CTGGAACGTCCTCCCCCCGCTCTTGGGGCTATCCATTAGTCACATCTTTCTTAACATAAAATTTGACAAAAAGAGAAAAGTGTGCAAGATGGCTCAAGGGGGTTCTATGGGGGGACTAATTTGATGAGATAGTTTCCAAGTCTGGCTGATATCATGTAACCTTCGCAGTCCCAACCAAATAGTTTTAACACCTGGTTCACCGTCACCTTTTCTACCTAAAAACCCCCCAAGAGAAGCAATCATTCTGACCGCTTCTCGAAAGGAGGGCGGCTTTTCAGGTGGCGGACTCTTTTTATGAATAGTGGCACACAAAGATTGCCATTCATGTTCTTCCAAAAAAACTTTCACAACTCTCCTCTCCGTGTAAGCGTGCTTGATAGGTTAACCAGAGTAATCTCCAAGCTACAATTGAATAGGTAGCTAAGGCCATCTCAATTCTACGACCCGTTTCTAATTGCAGTTTTTCTAATCCACAACCACTTTTTAAAACAAAATGATAG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 2 589278-590245 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANKQ01000003.1 Microcystis aeruginosa TAIHU98 contig3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 589278 37 100.0 35 ..................................... AAGAATGAAGGTATAAATGCCAAGCATTATTTTTC 589350 37 100.0 37 ..................................... GTGCAATCTCTTTAAAAGCAATAGGACTGACTTCCAT 589424 37 100.0 34 ..................................... GTAGAATAACTCAATATCAGTATTCGGAAATACT 589495 37 100.0 34 ..................................... CTACTAAGAACATATTGTGACCTCGATTAATTTA 589566 37 100.0 34 ..................................... ATTTGTCTATAACTTTAATAAGAAAATAAATTAA 589637 37 100.0 36 ..................................... TTAGTTTAGCGGCAGCGGCTGCCACTAAACCAGAAA 589710 37 100.0 34 ..................................... AGACACAATAACGACATTTTTAAACGCTATAATT 589781 37 100.0 33 ..................................... TTGAATCCTAACTCTTTCCCTAAATCAGCAGTA 589851 37 100.0 36 ..................................... TATCGCATTGATTGAAAGTGTGGTATGATAGTAAAG 589924 37 100.0 33 ..................................... GGTTAATTTTTCTAAATCGAATCGGTACGTCGG 589994 37 100.0 37 ..................................... AGATTAATTCTCTTAGTGCCGCTGGTGATTTTTTTTA 590068 37 100.0 34 ..................................... TTTAAAAATAGCTGCAAGTTAACCCTAAGTCCTT 590139 37 100.0 33 ..................................... AGGGGTTAATGGCGTTTCGGAGCGCCAGTTTTA 590209 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 14 37 100.0 35 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : CTCCTAAGGTGGTATGAACTTTGAGACCAAAGGATTTTTTATAATCTAGATAACCCATTCCTTTTTTGGCTTTTTGCGTCGTAAAGTCTAAACTTGTTGTGTCTTGCACTGCCAAAACTATTGGATGTTCTTTGATTCTTTCTACTGTACTTTTGGCTTGGGCGGCAATTATATCTGAGGGGTGAAAATAGGGGGAATTCCAAAAGTCGTAGGTGGCACTCGCTGCGGCTAGATTTCCCGAAGCTTGTGGCACACTTGTACTAGGTTGGCTGGCCAAGTTTTCTACGATACTGATTAACCTTTTCTTTCTTCTGGTGTCCCCTAGGTCTGCATACTGTAATTCTTGGGCTGCCCATTTCTCCATTTTTTTGCTTACCTCCACCTTAATTCCTTCTTTCAAAACTATACCTATCAATCGTTTCCCCTTTTTTAAGTTTCTTCTCTTTTTGTTAAGAAAGATCTGACTAATGGATAGGCTCTTGGGGAGGGGGGGAGCCGGA # Right flank : CTGGAACTTGAAACCTTCTAGTCTATTAATTTCAAAATGAGAATTGCTGTCAGTAAGTTTATCGAACTGCTTGCGTCCAAAATATCCTATAAATTAGAGGAAGTATAAGCTAATTTGTATTGATAGTAAATCTGTTTTTAATAGTATGAGCAACTCTCAATCGCACGCTAAAAACCTTCTCCCTTGTTCCTTCTCCCCACTTCCCCATACCTATTACCTAGCATCATTAGTATTCTATAATACCAATGCTTAGGAAACTATAAAGAAAATCCCAAGATTAGGCGAGTCCCTTGGCGAAAAAGGCTATAGTAGCATAAAATCCGTAATTTTATCTACAAAATTGTTATGACAGTTACCAATAGACAAGAGCTAGAAGAACTGATTCAACAGGTGAAAAAAGCTCAACAACAATTTGCCAACTATAGCCAAGAACAAGTAGATCTTATCTTCAAAAAAGCGGCATTAGCAGCCAACAACGCTCGCATTCCCTTGGCTAAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA //