Array 1 36157-36853 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJFU01000005.1 Mycoplasmopsis canis UFG4 Contig05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 36157 36 100.0 30 .................................... AAAAAGGAGATAAAATGGACAATCAAAAAT 36223 36 100.0 30 .................................... TTCAATTAATTTTGTTGAACTTGAATTTTT 36289 36 100.0 30 .................................... TTTGATATTAAATTCTCTTAATTCTTTATG 36355 36 100.0 30 .................................... GGTTAAACAAGAATTTAAAAACATATTAAA 36421 36 100.0 30 .................................... GCATGCGTTTTACTTCGAAATAAAGCAATA 36487 36 100.0 30 .................................... TCTGGCTTATTAATGACGTCGTCATTTTTA 36553 36 100.0 30 .................................... TATTCAAAATTAAAATATATTGTTGGAATA 36619 36 100.0 31 .................................... CGTAAAGATGAATACTTCATGGGTGGAGTTA 36686 36 100.0 30 .................................... CTTCATCGGTCAAGGTTTCATCTTTCATAA 36752 36 100.0 30 .................................... AATATCAACAAGAAACATATTATCTGATTC 36818 36 91.7 0 ........................A.....G....A | ========== ====== ====== ====== ==================================== =============================== ================== 11 36 99.2 30 GTTTTAGTGTTGTACAATATTTGGGTAAACAATAAC # Left flank : TTAACAAAAATTATTTACAAAATATTGCCAATAAAGTGAATAAAAAGATAGGTTACGATCTGGTTAATATAAATGAATCAACTAGTAAACTATTTAAGTCAATGTTTGATATTAAAACAAAAGAATTTATAACATCAAGTTTGTTATACAGTTTTTTAAGAAACATATCACAAGCAGAAAAACAAAATATAATAATCAAAGATATGGATGATATAAGTCTATCTCTTTTAACAGAATTTTCAAATGACTTCAACATTATAGTAATGACCAATAATTCGTTTAATATAATTAAAAGCTCTTCAGAGGTATTATTAACAAATTTTGTAGATGAAAATCTATATACGTTAAAAAATATAGATAATGAGAACGTTTTTGAATATTTCATTGAAGAATATTTTCAAAAACCGTTTGATAACGTTAATCATGAACTTATTTACACAAAAGAAACAATGGAAAATATGAAAAAAGCTTTATTTTTAAAATAAATTCTTTGTAATGAG # Right flank : ATTTAAAAAAACATTCAATTTATTTTGAATGTTTTTTTAAATTTTAACCTTTGAAATCATATAAATAGCCGCAGTTTCTGCTCTTAAAATTCTTTTCCCTAAAGAAACGCAATCAACGTTGCTATTTAAGGCAACTTCTATTTCATTATTAGAAAATCCGCCTTCAGGCCCAATTAAGAATAAAACATTAGAATCAATATTATTTTCAATCGAAGCTGATTCATCTTGTTTTTCATGAGCAATTATTTTCTTATACCCCTCCATTGCTATTACATCTTCAAATTTGTGTAAATTCGTTAATTCAGGGATAATGTTTCTGAATGATTGCTCAGCTGCATTTTGTAAAATAGTTTGAAATCTCTCTAGTTTTTTTTTAAATTTATTGAATTTATATAATTCGCCATTAGTATACTCAGTAACCATGGGAATTATTTTTGTAGCCCCTAATTCAACTAATTTTTGAAGTGCCCATTCAAATCTTTCGTATTTAATTAAAGAAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTGTTGTACAATATTTGGGTAAACAATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGTGTTGTACAATATTTGGGTAAACAATAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-86.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //