Array 1 46414-37477 **** Predicted by CRISPRDetect 2.4 *** >NZ_OAOJ01000005.1 Streptomyces sp. TLI_55, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 46413 28 100.0 33 ............................ TCACCGTCTGACAGCTGCCGGCACCCAGGAGGA 46352 28 100.0 33 ............................ CCTGGTCCAGGCCCTTGGGGTCAGTGACCTTTT 46291 28 100.0 33 ............................ CGGGGACAGCTTGTTGCTGGAGCCGTTCTGCGG 46230 28 100.0 33 ............................ CCCTGAGAGCGAGAACGAATGCCAAGCCGGTTC 46169 28 100.0 33 ............................ CCTGATGAAGGTCACCGGCCTGTCGACTCCGGA 46108 28 100.0 33 ............................ GACGAACAGCGACGCCAAGCCCGCGCCCTCGGT 46047 28 100.0 33 ............................ CTCCGGCCGGGCGTGGTTCTCGGTGTTCCCGAG 45986 28 100.0 33 ............................ CGGCCGGCCCTACCCCACCCGCAACCCGGCCCC 45925 28 100.0 33 ............................ CCCGCACAACCACAAGTACACGCTGAGCCTGAC 45864 28 100.0 33 ............................ TCGGTCAGATCCTGCGCGTTGACGACGTGGCGC 45803 28 100.0 33 ............................ GTGGTTGAGGGTGCGGCGTCGGCCGAGGGTGGT 45742 28 100.0 34 ............................ CTCGCCGCCATGGGCTACGGCGACCTCGCCGCCC 45680 28 100.0 33 ............................ CGACTGCCCGGAGCTGCTGGACCTCGGCCACGC 45619 28 100.0 33 ............................ CCGTCACCGCGCTGCAAGGCACCGTCACCGCCA 45558 28 100.0 33 ............................ CCCGCACTACTGGGCGGAGAAGCTCGGCGGTGG 45497 28 100.0 33 ............................ CCTCAAGACGGCCCACTTCTACTGCAACAGCGT 45436 28 100.0 33 ............................ CGGTGTGCCGGCCTCGCGCGGGGATGGCGATGG 45375 28 100.0 33 ............................ TCGAACGAGATCATCGGCAGGTCGCACGGAGGC 45314 28 100.0 33 ............................ CCCGCAGCACTCCAGCCCGCACCCTGCCGAAGC 45253 28 100.0 33 ............................ CTGGCTGAGACGGACAGTGTGGTGCACAGCGAA 45192 28 100.0 33 ............................ GCTCTGGGTCCCGCTCGACCAGCGCGTCGCGCA 45131 28 100.0 34 ............................ CGAGCACAGCAGCAGAGCGCATGGTCCCCCCCAA 45069 28 100.0 33 ............................ CGAGCTCGTCGACGCGGGCCGGTTGGAGATCGG 45008 28 100.0 33 ............................ CGCCAGCAGGCCCGTGCCCGCACCGGCGGCCGC 44947 28 100.0 33 ............................ CTCCCGGAGCCACGTCGGGTCTATCCGGACCTC 44886 28 100.0 33 ............................ CACGTCGCCAAGATGTACGGCACCCCCCGCATG 44825 28 100.0 33 ............................ GTGCTGGTAGGGATGGAGCTGGAACCTGTAGTG 44764 28 100.0 33 ............................ TCCGCAGCAGGTGTCCTACGAGACGATCGGCCC 44703 28 100.0 33 ............................ TGCGGGTGGACTCTATGAGTCCGTTTGTGGTGT 44642 28 100.0 33 ............................ GCGCGGGGTGCCGACGGAGAAGGCCGGCAAGGA 44581 28 100.0 33 ............................ CTCCGTTCCCTGGGACGAACTGACTCCCGAGGA 44520 28 100.0 33 ............................ CCAGAACAGTGGGGAGTCCGGGGACCACGGCGG 44459 28 100.0 33 ............................ CCCGCGCAGTCTGGCGGGCAGTTGTCACATGTC 44398 28 100.0 33 ............................ CCCCTACAGCTTCGGGATCGAGCACGTGGCCGC 44337 28 100.0 33 ............................ GACGAACTCCACCCGATCCCCTCTCCCCGCGCC 44276 28 100.0 33 ............................ CATCCGCTCCAAGGCGATCCCGGCGGACGTCAC 44215 28 100.0 33 ............................ CGCCTCGCCGACGTCTGGCACGCCGTCGAATGG 44154 28 96.4 33 .........T.................. CTGATCCAGACCCGCAGCGTCCCCGTTCTCGTC 44093 28 100.0 33 ............................ CCTACTGGCGAGTCCCCGGTGGGCACACGTCAT 44032 28 100.0 33 ............................ CCGCCATGACCACCACCCGCACCGCGCCCCGCA 43971 28 100.0 33 ............................ CGCGAACAGACTGCTGCCGACGGCACACGCTGG 43910 28 100.0 33 ............................ CAAGATCCCGGAGCACATCGCCCGCATGGTCGG 43849 28 100.0 33 ............................ CTCGGCTCCCCTCGTCGGGTCGTTCTCCCTGTC 43788 28 100.0 33 ............................ CGAGCCATCGGCCGGCGGGGTGTTCCTGCACGA 43727 28 100.0 33 ............................ CTCCAACATCCGGTTCTTCCTCACCACCACCGA 43666 28 100.0 33 ............................ GCTCCGTCGCGACCTGGGCGCGGTGCTCGACGC 43605 28 100.0 33 ............................ CCGCCTGACACTGGGCCACCACGCGGCGGACCG 43544 28 100.0 33 ............................ GTTCCTCAGCCAGGCCGGGATTGCCTGCGAGGG 43483 28 100.0 33 ............................ GCCTGATGGACATCGACCCCGCAGACATCGTCG 43422 28 100.0 33 ............................ CCAGAACAACGCCGTCACCGTCACTGTCCAGTC 43361 28 96.4 33 .........................T.. CCCCGCGCTGGCCGCCTACGAGGGGTTCGGCGC 43300 28 100.0 33 ............................ CCGCCCGACTCCTGCCGCGGCTCCTGAAGGGGC 43239 28 100.0 33 ............................ CCAGAACAACGCCGTCACCGTCACTGTCCAGTC 43178 28 100.0 33 ............................ CCCCGCGCTGGCCGCCTACGAGGGGTTCGGCGC 43117 28 100.0 33 ............................ CCGCCCGACTCCTGCCGCGGCTCCTGAAGGGGC 43056 28 100.0 33 ............................ GGCAGCCAGCATCGAGGCGGCGGCCGACACCAC 42995 28 100.0 33 ............................ CCGGACGCCCTCACCACGCAGGCAACCCACGCC 42934 28 100.0 33 ............................ CGAGCTTCTTGTTCACGTCATCACCTCAGACGA 42873 28 100.0 33 ............................ GCTCAAGGAGCGCTGGAGTTGGTACCGGGGCCC 42812 28 100.0 33 ............................ GCTGGCCTGAGCCGTGCCGCTCGACGACGCGTC 42751 28 100.0 33 ............................ CTCCGGGCCCTTGGCGAGCACGTACGCGGCTTC 42690 28 100.0 33 ............................ CTGCGCGAGGGGGACGTCGTCCTCGACCAGGGC 42629 28 100.0 33 ............................ GGACAGGGCCTGATCATGACCGCCATCCTCAGC 42568 28 100.0 33 ............................ GACTCACTCAGGTGCATAGAGCATGGGCGAAAC 42507 28 100.0 33 ............................ TGCTGGCTGGCCGTCAGCTGGGCCGCCGTACAC 42446 28 100.0 34 ............................ GGTTTTCCTCGTCACCGGGCTGTTGGTCGGCTAC 42384 28 100.0 33 ............................ CTCCAACGGGCCGGCGGCCTGACCTACATCAAC 42323 28 100.0 33 ............................ GTGGTGCCCGGGTTGCGCCAAGTGCTCGTGCGT 42262 28 100.0 33 ............................ GCAGCGGCTGCCCTGCGCTGCTTGCTCCCGCAG 42201 28 96.4 33 ....C....................... GTCGCGGCACACAAGTACTCCGGCCTGTTCGTG 42140 28 100.0 33 ............................ GGCGGAGGAGGAGAAGGCGAAGCAGGCGGAGGT 42079 28 100.0 33 ............................ ATGACCCGCGCTGACCTGAAGGTGGCGCGCGGG 42018 28 100.0 33 ............................ CTCGCCGCGCTCGGCGAGCGGGAGGACATCCGC 41957 28 100.0 33 ............................ CCTCGGCGGAGAGGTCGTCAGGGTGTACGGGCA 41896 28 100.0 33 ............................ CCCAACCCGCATGACCCGCTGCGCCCCGCCGGC 41835 28 100.0 33 ............................ CCGACATCGGATCAACTCCAGGACCTGCACGAC 41774 28 100.0 33 ............................ CGCCGTTCAACTCACCCGTCTATCCGCATCTGG 41713 28 100.0 33 ............................ GTCGGCGAGCCATTCCGCGTACGTCTGCTTGTG 41652 28 100.0 33 ............................ GACGCGGCGCAGCCGGAATCCGATCAGGCCGAC 41591 28 100.0 33 ............................ CCGGACCCGGGCGAGCCGTTGGGGACGTTCGTG 41530 28 100.0 33 ............................ CCGCGGCACCATCTACGACCCACGCTGTGCCTG 41469 28 100.0 33 ............................ TCCGAGACGACGACGCGCGTCTTCGCCGCCCTC 41408 28 100.0 33 ............................ GCTGGGGTCGACCTTGCCGGGCTGGACCTCTTT 41347 28 100.0 33 ............................ CGAACACCTGCATCAATCTCCTCCTCACGCCGC 41286 28 100.0 33 ............................ CCATCGACTGAGAGGACACCATGACCCGCGACC 41225 28 100.0 33 ............................ TTCAGCGATGGCCACCTCGGGGCCGGCGGGGGC 41164 28 100.0 33 ............................ GATCTGGTGGCGCCTGAGCGTGGCCAGATTCAG 41103 28 96.4 33 .....................A...... CCCGGAAACGGCGTCTGGTTACGCTCCCCTCAC 41042 28 100.0 33 ............................ GGGCAGCTGGTCACCTGGATGCCCGGCATGGAC 40981 28 100.0 33 ............................ GCTGCGCCAGATCGACGCCCGAGATCGTGCCCT 40920 28 100.0 33 ............................ GAAACTCCAGCTGATCATGTACGCGGCTGTCCT 40859 28 96.4 33 ..........................C. GAGGCCGTGGGCAACGGTCAGGATCTGGGGCCA 40798 28 100.0 33 ............................ CGGCGGCAACAGCACCTTCGACTCGGTGCATCA 40737 28 100.0 33 ............................ GGTGTCCGGCTCGGCGGGCGGGGGCGCCACCCA 40676 28 100.0 33 ............................ CTCGGTCTCGTACTCGATGTCCGCGGGCATCGG 40615 28 100.0 33 ............................ GACGTCGAGAGTGGGGAGAAGGGCGAGCGCGTG 40554 28 100.0 33 ............................ CAGAGTCTGGACCACTCCAGCCCTCGTCCCGCT 40493 28 100.0 33 ............................ CTCCGGGTGAGGACCGGAGACGCCGGTGAGCGA 40432 28 96.4 33 ..................A......... GAACAGCGTGGCGACGAGCGTCATCACGCTGAG 40371 28 100.0 33 ............................ CGGCAGGCGGCGGCGCTCCTCGGTCGTCGTCCT 40310 28 100.0 33 ............................ GCTCGCCGCGGCCTATGGCCTCGATGTGTCGGC 40249 28 85.7 33 ...........A..C........CT... CCTCGACGGGGAGCCTTGGCAGTTCGACGTGGC 40188 28 85.7 33 .C.........A...........CT... GGTTCAGGTTCAGCAGCACGGTTGGGCCACCTC 40127 27 85.7 35 ...........A..C.......G.-... TCCGCAGCGTTCGGGCTCGTCTGCGGCCACGACGG 40065 28 78.6 33 ...........AT.C........CT.C. ATGGAGTCAGACAACGGTCGAACCGTGCCCGTG 40004 28 78.6 31 .C.........A..C........CT.C. ACGCGCTGGTGGACTACCGACCCGACCTGTA 39945 28 92.9 33 .C............C............. CGTCACGGCGCGCCGACAGCCTGAGTGCGCCAC 39884 28 89.3 33 ..............C.....TA...... CCTGGCCATGGTCGACCACATCGACCGCTCCGT 39823 28 96.4 34 ..............C............. GCGGACGGCAGAAAACGCGGTGCGCGAGGCCGCC 39761 28 89.3 33 ..............C......T..A... GAAGGATTACCGCGATGTGCTGATGGACCTCGA 39700 28 100.0 33 ............................ CATCGTCTACCGGCGTCTGCCCGACGAGGCCAA 39639 28 96.4 33 .................A.......... GCGGCCTATGAGGGGCCGGAGAACGAGCAGGCG 39578 28 100.0 33 ............................ CGTGCTGTCCGGGATCGCGAACCCGGTGGCGGG 39517 27 96.4 33 .....................-...... CAGCGGCATCGCTACCGGGAGCAGTGCGGTGAT 39457 27 96.4 33 .....................-...... ACCACCTGGTCCGCTTGTTGGTTGAATGACCAC 39397 28 96.4 33 ......................G..... CCTGTTCCGCGGCAGTCTCGCGACCGCCATAGC 39336 28 100.0 33 ............................ GTCGTTGATAGCACCGGTACAGCCAGACCCGGC 39275 28 100.0 33 ............................ CGCCACCATCCGCCGGATTGCCGTCTCGGGCGC 39214 28 100.0 33 ............................ GACGAACACCTCGTACAAGCTCAGCGTGGCCGC 39153 28 100.0 33 ............................ CCGGGCTCGTCGGGCCCTGTCCCGTGTGCAGCT 39092 28 100.0 33 ............................ CTGTGATGTGTCCGGTGTCAGTGACACCCGGGT G [39070] 39030 28 100.0 33 ............................ GGTGGAGTCTCCCGGGTGGTGGCTTCAGCGTCT 38969 27 96.4 33 .....................-...... TCCCTTCCCCTTCGCCCTCTCCGCACCGTCTGG 38909 28 100.0 33 ............................ GTCCGGGCCGGTGAACAGCAGACGGCCCTGCAT 38848 28 92.9 33 ...........A..C............. GAGTACTGCCCGAAGTCGTGGAACCCTGTGATC 38787 28 92.9 33 ...........A..C............. ATGACCCGCGCTGATCTGAAGGTGACGCGCGGG 38726 28 92.9 33 ...........A..C............. GGCGTTGAAGCCTGGCGGAAGAGCAAGGGCCGC 38665 28 92.9 33 ...........A..C............. GGTGAGCAGGGTGTCGTCGATGTCCTGCTCGGT 38604 28 92.9 33 ...........A..C............. GAGGCCATCAAGGGCAGTTGCGAGGGCCTGCCG 38543 28 92.9 33 ...........A..C............. CTCCTCTACGAAGGACCGGGCGCCGTCCTCGGC 38482 28 92.9 33 ...........A..C............. CCAGTCCATGACCGTCAGCGCGTTGTTGTCGTT 38421 28 92.9 33 ...........A..C............. GCCGATGACGGCCAGTGCGGCGGCGCAGTAGGC 38360 28 92.9 33 ...........A..C............. CGTCGACGTGCACGTCGCCTGGCTCGGCGTCGG 38299 28 100.0 33 ............................ CCGTCAAATCGAGGACACTGAGCGTGCTCTCGG 38238 28 96.4 33 ....................A....... GGCGCAGGGGAATTGGCGGCAGGTTGGGCGCTT 38177 28 96.4 33 ...........A................ GGTGATCTGCGGACCGTTCGTGAATCCCAGGGA 38116 28 100.0 33 ............................ TTCGTCGATGACCACGGTGATACCGGGATATTC 38055 28 100.0 33 ............................ CTCCCGCTGGCGGCCCGGCAGACAGACCGGGGG 37994 28 100.0 34 ............................ CGTGGGCGAGATGTACGGCGTGCGGTGGACGGCG 37932 28 96.4 33 ........................C... GCCCGGACCGGTCACCTATGGCCGGTTCGCCAA 37871 28 100.0 33 ............................ CCACGACGCCTACCGTCTGCCCTTCGACCCGGC 37810 28 100.0 33 ............................ CCACGACGCCTACCGTCTGCCCTTCGACCCGGC 37749 28 100.0 33 ............................ CCAGTCGGCCAGTTCGTGGGTCTCGCCCTGGAG 37688 28 100.0 33 ............................ CCTCGCCGGCTACCAGGCTGGGCACACGCCGTC 37627 28 92.9 33 ..............C.......G..... GCGTCGACCGGGACTCGAACCCTGACCACTGGT G [37604] 37565 28 89.3 33 ....C......A.........T...... CGGACTCTTGGTGCCCTTGCTGTGGCTGGCGAG 37504 28 78.6 0 ..G....G...T..C.........C..T | ========== ====== ====== ====== ============================ =================================== ================== 147 28 98.2 33 GTCGTCCCCGCGCCTGCGGGGGTTGCTC # Left flank : CGGTCGGTCGGCAGCCGCCCCCACGTCAGCCCCGACGCCAGCACTGGAGCAGCCTCAACCGCGTCCACGGCCTGGAACGCCGGGCACGCCTTCCCACAGTCGTGAATACCGCACACCCACATGAACCACAGCCGGCCCCGGCCCCCGCTGATCTCATCCAGCCTCTGCCTAAACGCCCGCGACAGATACTGATCCCACATCAGCCCTGCTACCGCTGCCGTGTCCAGCAGATGCCCCAGCAACAGATGGCTCCGCCCACCGTTCTTCGCCGCCGACTTCCCCCAAAGCCGCGACACCCGTTCAACAGCCTCCGGCGACAGCCCCATCGCCTCCATCAGCCGGACGACGGACCCCTCACGCTCCACCACGGACCCCCTCCACTCAGGCGCCCTGGCACACTAGACCCCGCCACTGACAACGCCCCCGAACGAAGACACAGACGCGGAATGCAGGTAAACGAAAACCAGCCCCCTCGCTAGCATCACCGCAGATCACAAAGA # Right flank : AGCGGCGTCAACCGGGTGATGGGATTAAGAAGATGTCTTGATTGGCAGTGGTTCGTTGTTCCGGCATGGACATAGTTGAGCGGCTCGTGCCTGACGGACTGTGGGAGATCTTCCAGGACGTGGCGCCGGAGCCGCCGGTGCGTGCGCAGGGCGGAGGGCGGCGGCGATGTGATGACCGTGCGGTGCTCGCTGCGATCGTCTTCGTTGCCACTTCTGGCTGCGCCTGGCGGCAGCTACCGCCGGTCTTCGGCGCGTCCTGGCAAACCGTGCACCGGCGCTTCACCGACTGGTCCAGGGCCCGGGTATGGGCCAAGCTGCACCGCGTCGTCCTCGACCGGCTCGGCGCGAACGGCGAGCTCGACTGGTCCCGGTGCGCGATCGACTCAGCCAGCATCCGTGCCGTCAAAGGGGGCCCCTTGACCGGACCGAATCCGACCGATCGTGGCAAGCCCGGGTCGAAGATTCACGTCATCTGCGACCGAAACGGGCTCCCGCTCTCC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCTGCGGGGGTTGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCCTGCGGGGGTTGCTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [53-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 59991-57459 **** Predicted by CRISPRDetect 2.4 *** >NZ_OAOJ01000005.1 Streptomyces sp. TLI_55, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 59990 29 100.0 32 ............................. GGCACCGTCCAGCTCCAGTGCGACAGCTTCCG 59929 29 100.0 32 ............................. TCCCGGGCCTTTCGCTTGTCCAGGCTTCGGAA 59868 29 100.0 32 ............................. CGACTTCGAGCGGGAGTCCGCGGGGTAGAACT 59807 29 96.6 32 ............................G TGACTCAAACGCCAGATGGTGTGTTCATCTAA 59746 29 96.6 32 ............................G ACCACGGCGCCTACATCTCCCTCACCCACGTC 59685 29 96.6 32 ............................T CCTCTGTGCGGGAGTGCCTTAGATCCGTCCGG 59624 29 100.0 32 ............................. GGGACGTTGTGCTTGGGGGAGTTGGCCATGTT 59563 29 100.0 33 ............................. TTCGTTACCCGAAGGGGTGACGTTCCGTCACCC 59501 29 96.6 32 ............................T GCCTTGCGTTGTTCTACGCAACGAAGCCGACC 59440 29 100.0 32 ............................. TGCACCTCCAGCGCGTCATTCACCCACGCCAC 59379 29 96.6 32 ............................G GCTGTTGTCGGCGCGCGCGGCCCGTCGGGTCC 59318 29 96.6 32 ............................G ACGGTGACCGTGAAGCTCTACGCTGCCAGCAC 59257 29 100.0 32 ............................. CCGGGGCCAGCTGGAAATGGCTCAGCTGGCTT 59196 29 96.6 32 ............................T ACGAATCGGCGATATCCGGTTCGTACGCGTCG 59135 29 100.0 32 ............................. GGCTCGCCGGGTGGACGGCGGCCGGAGTCGTC 59074 29 96.6 32 ............................G CACGCGCGGCCGGGGAACGGGGGAGCGCTCGG 59013 29 100.0 32 ............................. CCAGGTTTGGCCATCGCGCCGAACGCGAGCCC 58952 29 96.6 32 ......................C...... CAGCACTGACGGCACTCGCCCGGCGGCGGGTT 58891 29 96.6 32 ............................T CATCGGGACGTTGGCGCGTCCCTTCTCCGGGT 58830 28 93.1 32 .C...............-........... TTTTCGCGCGCTTCTTCGGCGCCTGGGTGGAT 58770 29 96.6 32 ............................G CCTTGGGCTTTCCCTCGTAGGTGGAACACAGC 58709 29 100.0 32 ............................. GGGTGTGCGTTCAGCGGGACTTCGGCGTACTG 58648 29 96.6 32 ............................G CAGACCTACACCGTTTCGGCCGGTTCCATGAA 58587 29 100.0 32 ............................. CACCCGCGAGGGGCGAGCGTCGATGATGAACC 58526 29 100.0 32 ............................. CCGGCCCAGCCGATCCCGGACCCGGGCGAGCA 58465 29 100.0 32 ............................. CCGGCCCAGCCGATCCCGGACCCGGGCGAGCA 58404 29 100.0 32 ............................. CATCGATCACCGCGTCTGGCTTCCCCGAACGG 58343 29 100.0 32 ............................. TGGCCCATGACCGCGAGCGCCTCGCGGGTCTC 58282 29 100.0 32 ............................. CGGGAGCGGTTCGCGGAGATCGGGGGCGTGGA 58221 29 93.1 32 ....................A.......G AGTCCCTCGCCGGCCTATCGCTGGCGCGTCGT 58160 29 96.6 32 ............................G GGGACCCTGGCGGTCGCCGTCCTGGAGAGCGC 58099 29 100.0 32 ............................. AGCGCGGCCGACGTCGGCACGCCGTAGGTGGC 58038 29 96.6 32 .....................A....... GCATTCGTGCAGGGCATCAACCGGGGCGACCG 57977 29 100.0 32 ............................. CAGAGGATCTGGGCGGCGACGTCCTGCCCGTT 57916 29 96.6 32 ............................G CGGCTCAAGGAGATCGCCCGCGCCATCCGCGA 57855 29 89.7 32 .........AT.................G CGGGGCATGCCCTCGCCGATGGCGGGGGTCGA C [57840] 57793 29 96.6 32 A............................ AGCCGCGCGGACTCGGTGGCCTCGACCTCCCG 57732 29 100.0 32 ............................. ACGGCCAGCCGGACCACGGACCGTGTCATTGA 57671 29 93.1 32 .......................G....G GACTTCAAGGACTGGCTGTGCCCCGCCTGCCA GGG [57647] 57607 29 93.1 31 ............T...............G AGATCGGCCCACTTCACGCCTCGGACAGGCT 57547 29 96.6 32 ............A................ CACTACTGGGAGAACGTCTATCTCGGCCTCCC 57486 28 89.7 0 .....................-.CC.... | ========== ====== ====== ====== ============================= ================================= ================== 42 29 97.5 32 GTCGTCCCCGCGCCCGCGGGGGTTGCTCC # Left flank : CCGTGCGTCGTTCCCTTTGGTGATGCCGAAGTCCACGACCGTCGCCTCGCCGTCGTCCCGGACCATGATGTTGGACGGTTTGATATCCCGGTGGGTCAGCCCGGCCTCGTGTGCGGCGCTCAGCGCGTCGGCGACGCAGGACGCCGTGTACAGGGCCGTCGGCAGGGGCAGCGCTCCGGCCTCGATGACGGAGCTGAGCGATGTGCCGGTGAGCAGTTGCATCACCAGGTAGGCGTAAGGCCGTCCGTGGTGCGTTGCGGAGCCGAAGTCGTGCACGGTGACGATGTGCGGATGGGACAGGCTGCCAGCGACCGCGGCCTCGCGGGCGAAGCGGGCGACCTGCCGGTCGTGGTCCGTGCTGCCGTCGCTGGTGAGGACTTTGACCGCCACTTGGCGGTCGACCCTCGGGTCGTGTGCTCGCCACACCTGCCCGAACCCGCCTGCACCGACTGGCTCGATCAGCCGGTACCGGCCGTCCAGGACGGTCCCGACACCTACAA # Right flank : ACGCAGCCGACCGCGAGCCCGAGGGCCGCGTTGGCCGCGCCCCCACTGGGATGGTCCCCGGCCACGTACCCCCAGCAAGACCCTGAGCAAGACGTCCCGTCAGAACCCGGCGCCTGCGTTCCGTGACGGTCTCAGCGACCGCCGCGTGATCGCGCCTGGATCGCCTCCCATCATGGGGGGACGCGCCTTGGTCCACCGGGTTGAGTCCTGCCTTGGCCTCACCGATAGCGACTATGCGCTTCTCACCGCGTGGCTGGGATAACCGTCCGGGGCGGGCGCCCGTCAACGGAGCGACAGGCCAACACCCCAACGGCAGCGGACCGTTCAGCGAGAACTTGGACTAGCCAGCCGGCCTTGGCTGCTTTCTCAACCAGGGCTCAGGTACAGGCCAGGCGGTTGAACCACCCCCTCAGGCGAGGAAAGCAGCATCTGATGCGGCTTCGGGCCCGGGGTTCGGTTATGCAGCCTGGAGGCCGGTGCGTGCACTGCGAAAGCTGGCC # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.65, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCCGCGGGGGTTGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCCCGCGGGGGTTGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //