Array 1 3294073-3295666 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGNU01000001.1 Leclercia adecarboxylata strain NCTC10600, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3294073 28 100.0 33 ............................ ACGGTGAACGCCGCGCTGTGCTCCTCTTTCCAG 3294134 28 100.0 32 ............................ AGTTCGAGCTGCCCGGCAAGATGGATGACCTG 3294194 28 100.0 33 ............................ GCGCAGCTTGCGCGGTTCATAGAGCGGCAATGG 3294255 28 100.0 32 ............................ AACCGTCTGAAAGCTCTGACTTACCAGACCAA 3294315 28 100.0 32 ............................ GTCAAGCACTAATAGCTAATTTAGTCCGTTTC 3294375 28 100.0 33 ............................ CTGGTTGTAATACTGCTCAAATAGCCCAGCCTT 3294436 28 100.0 32 ............................ TAACAGGGTTCGCATGCATATCAGTAATAATA 3294496 28 100.0 32 ............................ TTCGGGCCTTTCAGTTCTGTCGCGTGCTCAAC 3294556 28 100.0 32 ............................ ACATACCCGGCCACATTCAAGATAGACAAGGA 3294616 28 100.0 32 ............................ TTTTCGGTGCCTTGCCATCAGCAATGCGTCGC 3294676 28 100.0 32 ............................ AGTATCCCCACAGCTTGAGAGGCGGGATTGTC 3294736 28 100.0 32 ............................ CTTAAAGACAGTAAAAATTTACGGTGGAAAAT 3294796 28 100.0 32 ............................ ACGCACCAGCGCACTCGCTTTCTGGCCTCGTC 3294856 28 100.0 32 ............................ GGATAATGCGTTACCAGTCAGGCTCACCGCTC 3294916 28 100.0 32 ............................ TCCCTGAAGCATGGCGGCGCGGCAGGCGTTCC 3294976 28 100.0 32 ............................ CAGGTATTTCAGCGACAACCACAGAAGCGCGT 3295036 28 100.0 32 ............................ TTCACATGACAAGTCGATAAAAGGGAATGACA 3295096 28 100.0 33 ............................ AGCAGCGGCGCTGAGCGTGACGCCGGGCTGGTC 3295157 28 100.0 32 ............................ ATGGTAAAGGCGACAAATCCAGCCAACCCTAA 3295217 28 96.4 33 ...............T............ AATGTGGGGATGACTTGCGCTCGGAGCACAGAT 3295278 28 100.0 32 ............................ AAGAATGCTACTGACGCCGCCGGCAACTCCTG 3295338 28 100.0 33 ............................ CATACAAAGGGCCGTAGTGGTGTTGTTCACTAC 3295399 28 96.4 32 .............A.............. TGGCTGTACCCGTCTGCATCGAGACGCGCAGC 3295459 28 100.0 32 ............................ GCCCGGGTTGAGCGTAGACTTACCTTCTGTTT 3295519 28 100.0 32 ............................ ATATTCACGGAGAGCTTTGGCGCTTCGTCAAT 3295579 28 100.0 32 ............................ TGACGAAGAATGCCCCGTCTGTTAAGGAGGGC 3295639 28 96.4 0 ...............A............ | ========== ====== ====== ====== ============================ ================================= ================== 27 28 99.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGCCGCGCTCGGTAAACTCGAAGAGAGCCGATGGCGAGCGGGCTTGAATGATTACTGTCGTGCGACGGCGATCCTGGCGATACCCGCCAACACTGGCTGGCGCGTGGTCAGCCGTGTGCAGGTAAAAAGCAGCGTTGAGCGTCTGGTTCGTCGTTCATTACGTAAGGGCTGGATAACTGAAGAACAGGCGCAACAGCGAATAGCGGAAGGGAAGGACAAGCGTTGTCATTTGCCATTTTTACCGCTTAGAAGTTTGTCTACGGGTCAGAGCTTTAAGTTATTTATCCGCCACAGTGAAATACAAACGGCGCCAGTAAGTGGTTCGTTTAGTAGCTATGGCCTGAGTGACACGGCAACAGTCCCCTGGTTTTGACCCTTTTTTTCGTGATTTTATAACTCGTTGATTTTTAATGGGGGATAGTGACGGTCAGAAAAAAGGTTTAACGCTTGAAAAGGGGGGTTATATAACAGGATCATAGGGATAGGTACTTTGGGTTCCA # Right flank : AAAAGTGGCCCCCGATATCGAGGAGCTGAAATCGTTCACTACCTATTCCATTGCCGATTCGGTACAGGCACCCATTTTTTTGCCCCGCCTGACTTATCGCCAGGCGGGGCATTTTTACGTCCGCACCCGCTCAACCGTCTCCTGCCAGGCTTGCCAGCGGGTCTGCAGTCGGGCGTGGCGCGCCATATCCGGGGTAAAAGTGACATGCTCCGGCAGATACTGTCGCAGCTGCGTGGTAGTCAGGTTAAACAGCGCCTTACGGGCCAGCAGGGCGGCCCCCATGGCTGAGAGTTCCGGCACGTCACTGCGCATCACCGGGCAGCCAAGCAGATCCGCCTGGTACTGCATCAGCCAGTCGTTTTTCGTCGGCCCGCCGTCGACCATCAGCGCATTCAGCGTAAAGCCCGGATGGACGCGCATCGCCTGCACCACGTCAGCAATCTGATAGGCAATTGCCTCCAGCGCCGCACGGATCAGGTGCGCCCGCTTCACGCCCCGGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //