Array 1 151681-153562 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDNB01000006.1 Neobacillus vireti strain DSM 15602 Scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 151681 32 100.0 33 ................................ TTCTGCTGTTGGTAATGTGTGGGATTCTATTAA 151746 32 100.0 33 ................................ TTAGAAGGTAATCGTGGAGGCGGTAGGCGGAAA 151811 32 100.0 34 ................................ CCCGAAAGAAGCGCAATTGGCTGCCTCTGAGGAA 151877 32 100.0 35 ................................ CTGCGCCATCTGCGATTCCACTGCCAGTCCGTCCA 151944 32 100.0 34 ................................ AAGCAGCTGTATTGGCCCGTGTGCTAGGAATTAC 152010 32 100.0 34 ................................ CTAAGCTAGCCCAAGTATCCATACGATAAAGGAC 152076 32 100.0 35 ................................ AACAATGTTTATGGCATCTCAGGCTGCAGAAGGTC 152143 32 100.0 35 ................................ AATAGAAGGTGGAACTGTAAGAAATGTTTCGTCAG 152210 32 100.0 35 ................................ ATGGAACTTACTTCAAAATAGCAGTTAGCGAATTA 152277 32 100.0 35 ................................ GCAATGATGCGTGAATCGGCTCATCGTGCTAAACG 152344 32 100.0 35 ................................ CTCACCACGATATTCAATACCCATCTAAAACCGCC 152411 32 100.0 34 ................................ TTCCATTCACCGTTGATGATGTGGATGAAAAACT 152477 32 100.0 33 ................................ TTTCGCTGTGCCGATAAATAAAAACTCATCGCC 152542 32 100.0 36 ................................ AGGTGGCGCTCTTAGGTCACACCTTAAACAGCGACG 152610 32 100.0 33 ................................ ACGATCGTTAAATACTTGATTTTGATAGTAGGA 152675 32 100.0 33 ................................ TATTACACCAACTTTATTACCGGTATAATCGAT 152740 32 100.0 35 ................................ CCTCCGGCATCGCAATATCTACACCGCTATGTGGC 152807 32 100.0 33 ................................ AAAAGTAAAGTAAACTTGTCCGTTCTCATTAAT 152872 32 100.0 33 ................................ ACGTGAGGTAAAGACTGCGAAAAGTGGATTAGT 152937 32 100.0 32 ................................ CATTCGTTTTAACCCCAGGACCGCACGGCTAC 153001 32 100.0 35 ................................ ATTAAGACTAATACCAACGGCAGCCGCAAGGTCTT 153068 32 100.0 35 ................................ CGGTACTTGGCTTTATCGCTGCTGGACAGCCCATC 153135 32 100.0 34 ................................ ACGGAACATGGTGTCCATTCGAGTAGCTGAATTC 153201 32 100.0 34 ................................ ATTAAGACTAATACCAACGGCAGCCGCAAGGTCT 153267 32 100.0 33 ................................ GCAAGATCTTTTCGAAGCAGCCAACCGTGCTCA 153332 32 100.0 34 ................................ TATTATTGGCTTTCAAAGGATCTCGGTCACATCA 153398 32 100.0 34 ................................ CATTATTGGCTCGAAGCCGCTTGCCGTGCCGCCG 153464 32 93.8 35 ...........................T.G.. TTTTGGGATAGGGATATCTTCATCCATGAAAACGT 153531 32 93.8 0 .........T..........A........... | ========== ====== ====== ====== ================================ ==================================== ================== 29 32 99.6 34 GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT # Left flank : TTGACATTTTTGTGAGATAATCCGATTATAGTACTATAATGTTATTTTGAATGTTTTGACAATTCAACAGTTGAATTACTTTTGAAGATTAAGAAAAAGATCCCTACTCAAATACAACAAGAAAAGCGGAAGAATAACCAAAAAAGGGTGACTTCTGCTTATTTTTATGTTTAAAAAAGCTAAGGAAATTGATATCCCAAGTTCGGGGAAAGATTTTTTTGATGAAAATGAAGATAGTCTTAGATTTTATCAACAATATAGTATTTGTAAGAACTAGGTAGAACTTATTAGTATGCAAGAATCTATCCATATAGATAGCCTTTTATTTTTTGGTGCGAGTGTGTAGTGTACATATTTTTTCTGGGAGTTTCGCACCTGAATTTCAATGTTTTATTAATGGAATTTGTTATAATTTGTATATAGTTCTTTTTTAATAAAGAAAATAGTGTGTTTTTGATCAAAAATTACCTACTTTTAAGTAATTTTGGTTAAAAATCGCT # Right flank : TCGAATGCGATTTATGAGATGAAGGTCCAAGTTATAAAGAAAGTGAAAACTTTTTGAAGGTAATGGGGAAAACATCACAAGGGCCGGCAATAACCCTATCAAAAAATATGTTAAATGGAATCAATGATAAAGTAGATGTAGTTGTTGAAATGTTAGAGTTCCTAAATGGCGACTGAATAGGGCTTTATGAAGTGGGTGAGAATCCAGGGAATACGGCTTCTATTTGATGGATGTATACGAATGTCACCGACGGAACATGTTAATTTACCTTTGATCCAAAAAATAACCTCAATCCGGCAAGATACAAAGAAGGCGGAGCGTATAAATTAGTTTATTTCTATGGCAGCGGGTATGACGCTGTTGCTGAAACGATGTTTATGGTCGGGAGTATTTAGGATCAATGGCTTTATTAGCAGTAAGTTTTCTAGTTGTTGGGGGAACTTACAGGTGATTTATTTTTAGCGTATACTATATTACTTTTTAAAACGTAAATAGTATAA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTCGTGAGTGCGTGGGTTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 162413-164028 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDNB01000006.1 Neobacillus vireti strain DSM 15602 Scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 162413 32 100.0 34 ................................ CCCAATGTTGAATGACAAAAACACGACATTTTCT 162479 32 100.0 33 ................................ TTGTGTGAAAAAGGAAGAACAGCCAGGAGGCGG 162544 32 100.0 35 ................................ TGGAAAGTTGCCCTTGCCCTTCGGGGTGAGGGTTT 162611 32 100.0 33 ................................ TATTAGGTTTAATTTTAATGGTCCTCGTTATTG 162676 32 100.0 34 ................................ TTAAAATATAATCAAGAAATCATTGATAAGGCTC 162742 32 100.0 34 ................................ TCTATAATGGGCAACTAAACAATAATATCTTTAT 162808 32 100.0 34 ................................ AGCCAGCGCAGGCATATTGTTTTTGCTTGATAGA 162874 32 100.0 34 ................................ AATCACAAAAATCACCATCTTTCATTATCCACTC 162940 32 100.0 35 ................................ ATAATGACTCGGCTTTGATTGTCGAGAAATTGGAC 163007 32 100.0 34 ................................ AAGGTGTTGGCGAAGCGGCGGTCAAATAGATGTA 163073 32 100.0 34 ................................ CGTGTCCACAGTGAATACCTTCCGACCAGGTACG 163139 32 100.0 34 ................................ AGCGCTTCGTCCCAGTGATACATGATCGGCTGCG 163205 32 100.0 35 ................................ GTTGATTGTCATTTTCGGATGTCCCCCTAATTGGT 163272 32 100.0 34 ................................ CGAAGAAACATTAACAGAAATTCCGGATGGCGCA 163338 32 100.0 34 ................................ TAAAATCCTAACCGTCGCATCAATGCCCAGTGCC 163404 32 100.0 33 ................................ GCCAATGTATACCACTAGTTATTACCCTAATAG 163469 32 100.0 34 ................................ AAACACAGTTAAGACAATATCGGATATTATCCCG 163535 32 100.0 35 ................................ ACTATTCTGCACCCTACCCTACTAATAGAATGGTC 163602 32 100.0 34 ................................ TCTGCGGCGAGTGATCCAGTCTCGAAAGGGCCTT 163668 32 100.0 34 ................................ ATCGTAAGGCTAATTCTGTTTTTCCGTTCAGCTT 163734 32 100.0 33 ................................ CGTTATTTTTTCAATTTCGATAGCGAAAATATC 163799 32 100.0 33 ................................ CAGCACAACAATACGAACCCAAAACCAATGCCC A [163811] 163865 32 100.0 34 ................................ GCCAAAAGAGCCAGCATTAAAAGTTCGGAATTTT 163931 32 93.8 34 ...........A........A........... ATTTCGAGATTTATTCGAAAAATTGAATTTAAAC 163997 32 93.8 0 ...................G......C..... | ========== ====== ====== ====== ================================ =================================== ================== 25 32 99.5 34 GTCGCACCCTACATGGGTGCGTGGATTGAAAT # Left flank : TAGATGAGTATCCGCCATTTTTGTGGAAGTAGGTGTAATATTTGTTAGTGTTAGTTACGTATGACGTAAGTACAGTTAGTAGTGGTGGAAAAACAAGACTTCGGAAGGTTTCAAAGACCTGTCAAAATTATGGCATTCGTGTCCAAAATTCAGTATTTGAATGTAATGTAGATGCCACTCAATTTACAGCTTTAAAATTGAAGCTTGCTGATATTATTGATGAAAATGAAGATAGTCTTAGGTTTTATCAGCTAGGTAATAATTATAAAACCAAGGTAGATCATATTGGGGTTAAAGAATCAATCGATTTAGATAGCCCTCTAATTTTTTAGTGCGAGTGTATAGTGCACATGTTTTTCCTGGGAGATTCGCACCTGATTTTCTGTGATTAATCACTAATATTTAGCATAATTATATTGTGCTCTTTATTTATTTAAAGAAAATAGTGTGTTTTAGGGCAAAAGTTACCTATTTTTAGGTTGTTTTGGTCAAAATCCGCT # Right flank : TTAATGTGAATCTAATTACTAAAACCAAGTGTATTGTCTTGAAATATGGTATGTGTTTAATCGTTTGTACCTCAAAGCAAAGCCGACTTAGGCTGAAAACCGGGCGGCTCCGTTCGTGATGCCAGGCACCAGTTTCCTATTTTGCATTGATTTTTTTCTGCGCTTCCTTAGCAAAATCTTTGTACGGCGTAGGAGGAAGCGGATTAAAACTTTCCACCGCGATTGAAGCGATTTGAAGGGCCGTGTCCACGTTTCCCAACTCGAAGTGGCTAAGTGCGATATACGAGTCCTTAACATAAAGTAAGGATAAATCAATGGGATGATGAATATAAGGTGGGATTGAAACATTTTCTAAACAATCAATCGCTTCTTGAAAACGACTAAGACAATACAAAGCTTTTCCCTTTTCAAGACGGAATAAATGGCAGTATATCTCAAGTGTTGTTGGGCTAGCTAAGTACTTGTCACTGATTTCTATTGCATTAACGTATTCCCGCTTC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTACATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //