Array 1 1545328-1545775 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACWGV010000001.1 Pseudomonas aeruginosa strain ZBX-P16 ctg.s1.000000F.arrow, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1545328 28 100.0 32 ............................ AGGACCTGGAGCCACTGCGCAGGCACGCCGCC 1545388 28 100.0 32 ............................ GCGGCGCGCATGGCGAACGCGACAAGCAGATA 1545448 28 100.0 32 ............................ TCCATGCGGAGCAGGTAGCGCACCCACTCCTG 1545508 28 100.0 32 ............................ TAGTGTGGAATTGATGTGCGCATCTTCTTAAA 1545568 28 100.0 32 ............................ AGAAGGTGGAGAACTAGGAACTGTGTTCTTTC 1545628 28 100.0 32 ............................ AACATCTTGTTATCGCACTCCAGGCTCCACAA 1545688 28 100.0 32 ............................ TTCATCAGGATGCCGCCAAGGGTCCGCATAAT 1545748 28 75.0 0 ....................GGCG.CGG | ========== ====== ====== ====== ============================ ================================ ================== 8 28 96.9 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCTCCAATTGCCCGAAACTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : GCAAAAACTGAGTGCAACACCTGACCTTTCCGGTACGGTGCTGCCCCTATGTCATATACCGAACTCAGCGTTGAAGAACGCGCCACCATCCAAATCGGCCACGCCCAGGGCTTCAGCCTGCGCAGGATTGCTCGCCTGATCAATAGGTCTCCTTCGACCATCAGTCGAGAGCTGCGCCGCAATCGAGATGTCTGTGGCAGCTACTCGGCCCGCGCGGCCCAGGAGCAGATGAAGGCCCGCCGCCAAGTCTGTCGACCGAGCCGAAAGCTGCTGCCGGGGAGCGAGCGCTTCGAACTGGTGGTTCATATGCTGCGTGAGCGTTTGTCTCCCGAACAGATTGCCGGCAAGCTGCGCCACATGAACATACCTAGCCTCAGAGATGCCTACGTCTGTCGCGAGACGATCTACAACGCGATCTATGCCCTGCCAGTGGGTGAGCTGCGTAAGGAGCTGATCATCTGTCTGCGCCAAGGCAAGACGACGCGCCGGCCGCGCTCTGG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1546924-1547191 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACWGV010000001.1 Pseudomonas aeruginosa strain ZBX-P16 ctg.s1.000000F.arrow, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1546924 28 100.0 32 ............................ TCGAGCAGCGGCCCGAGGAGTCCGAAGACTTG 1546984 28 100.0 32 ............................ TGGAGAAAAGCAATGCGAGTGGTGCGAGGCCA 1547044 28 96.4 32 ....................T....... AGACAATCCGGACCTGCCGCCCAGGACGATCT 1547104 28 100.0 32 ............................ TGCAGCGACTGCACCTTGGCTTGCTGCCGGTC 1547164 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 5 28 99.3 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GCACCAGTGGGTACCTGATGTTGGTGAAGATGAACGACGCGACGGCGACTTCGGCGCTGGAAGGCTTCAGCGCCGCGCTCAATAGCATGCCGCTGGAGATGCGCAAGAGCATGACTTACGACCAGGGCCGGGAGATGGCACGACACGCCGAGATCACCCAAAGAACCGGCGTGGCGATCTACTTTTGCGACCCGCACAGCCCCTGGCAGCGCGGCAGCAACGAAAACATCAACGGCCTGATTCGCCAGTACTTGCCCAAGGGCACAGACCTGTCGGTACATAGCCAGGAGGAGCTGGACGCCATTGCGCTGCAACTGAATATGCGACCGCGTAAGCGCTTCGACTTCAAATGCCCAATCGAAGTTATGGGCGAGGTGATGCAGAAGGCCATGGCTATGCGGCATGATGCTCCAGTTTCAATTCAATGACCGTGTTGCACTCAGCTCCTGCAACCGCCCAGCTAAGAAAATGAAGGCCAGCAGGCCGAACACGATTGCGAT # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGCTTGCCCTCCGAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGGCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGACCAAGGCAGGCACAAAGAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGTCCCCCCTCACTGCCGTGTAGCTAAGAAGTCGCGAGCGATATAGTCCCGTAGGGCG # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 635320-636664 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACWGV010000004.1 Pseudomonas aeruginosa strain ZBX-P16 ctg.s1.000003F.arrow, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 635320 28 100.0 32 ............................ ACTAAGGACCCGAATAAATGCCAAGGCACTGG 635380 28 100.0 32 ............................ ATCGTGCCGGATAGCAGCAGGACGCCCAGGAC 635440 28 100.0 32 ............................ AGCAGCAGATCATCGACAACGCCCGCGCTTCT 635500 28 100.0 32 ............................ GAGAACGATTCCGTCTTGTTGGAGCTTTCTGT 635560 28 100.0 32 ............................ CGACGAGCAACTGCGCTTGCGCGTGCGTAACC 635620 28 100.0 32 ............................ GGAAGGCTGGCGCTCGAACGGATGTGTACAGG 635680 28 100.0 32 ............................ TCCGGATCACCAGGGCGACAGATGGCCACCTC 635740 28 100.0 33 ............................ CTCTGGCGGTAACCTTCCATGATCTGCGCAGCC 635801 28 100.0 32 ............................ TGCATGCACATCGGCGAACTGCTGACGTGCTT 635861 28 100.0 32 ............................ TGGCGCCGCCCGATTTCACGTAGCTGCTCGAT 635921 28 100.0 32 ............................ TGATATCCAGCTGCTCCAGGAACCGCTGGCGG 635981 28 100.0 32 ............................ TGATTTCGAAGGCCGCGGGCGACTGATCCGGA 636041 28 100.0 32 ............................ TGGATCAAAGAACGCATTCTCGGCACGTCGAA 636101 28 100.0 32 ............................ TCCTTGCCGGGCGCGGCGGCGAGCAGTTCGCG 636161 28 100.0 28 ............................ GAGTGTGAGGCCGGGCAAACGGATTTGT 636217 28 100.0 32 ............................ TTGACGGCCAATGCCGGCTTCGACTTAGCTCG 636277 28 100.0 32 ............................ AGCCACTCGCGGGCCAGCTCGGGCGATAGCAC 636337 28 100.0 32 ............................ GTGTCGCCCAGCACCGTTCAGCGCTACTTCAT 636397 28 100.0 32 ............................ TCGATCCACACCCGCGAGGACGTGGCCACCGT 636457 28 100.0 32 ............................ AGCAATGGAAAGCAGCGATGTGACCCGACCCG 636517 28 100.0 32 ............................ TGCAGGTCATAGGCGTATTCGAAGGACAGGCT 636577 28 96.4 32 ........................A... TGTCCCGAAGTTCATAAGCGGGCTTAGGGCGA 636637 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================= ================== 23 28 98.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTGGGGTGGATTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGATCGTTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGTTTTTTGGTCTA # Right flank : ACGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGGGCACCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATAAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGAAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGTTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGACGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGCTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 646720-645191 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACWGV010000004.1 Pseudomonas aeruginosa strain ZBX-P16 ctg.s1.000003F.arrow, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 646719 28 100.0 32 ............................ AACATCTTGTTATCGCACTCCAGGCTCCACAA 646659 28 100.0 32 ............................ AGACCGAGGACGGCTCGAAAACTCGGATGATC 646599 28 100.0 32 ............................ TTCGACGGCCACGCCTCAGCCCGGCCCAGGCC 646539 28 100.0 32 ............................ TTATTGAAATCCTCAGCGGCCTGCACTTGCTC 646479 28 100.0 32 ............................ TGATCACCCAAGCGTGCGTATCGCGGCCATCC 646419 28 100.0 32 ............................ TGATCACCCAAGCGTGCGTATCGCGGCCATCC 646359 28 100.0 32 ............................ TGGGTGTCCAACATCGACGGGTCGAACTGCTC 646299 28 100.0 32 ............................ TGCGTAGATGCCGCGATCATAGCGCGCCCTAC 646239 28 100.0 32 ............................ TTCGGTACTTCTGAACCATACGTCGCCGCATA 646179 28 100.0 32 ............................ AGTCATCGATGAACGACGAGCCGGTCAGTGCC 646119 28 100.0 32 ............................ AGAAGCTGGAGCGACGGCTGGCGGCAATTCGT 646059 28 100.0 32 ............................ CCGGACGTTCACGCTGGTGGTGAGACCATCCG 645999 28 100.0 32 ............................ TGGCTGTCGCTGCGCTGCTGGCCGCTGTGTAT 645939 28 100.0 32 ............................ GGCTGGTCCCAGAGCGGGTCGACGGCACGGTC 645879 28 100.0 32 ............................ GAACCGCGCGTTCATTGCTGAAGGCCATCGTC 645819 28 100.0 33 ............................ ACATCAGCGCCGCGGTAGCCGATGCCGATATCT 645758 28 100.0 32 ............................ ACCATCCCCGGCCACGGGTTGCCCGACACCTG 645698 28 96.4 32 ........T................... GTTCCATCCGGGTAGGTCACGTCCACGTCGTA 645638 28 100.0 32 ............................ TGGAGAGTGACCCGCTCAAGACCGAGGCCGAG 645578 28 100.0 32 ............................ TGATGCCGGACATGGGACGTTTCGCGGGAACC 645518 28 100.0 32 ............................ CCGGACGCCCCTAATCTGGAGGGCTCCTGGCA 645458 28 100.0 32 ............................ TTTCCCCGCGAGGCATAGCAGGGATATCTTGT 645398 28 100.0 32 ............................ TACAAGCAGATCGGCGAGCTGAGCGGCAAGGA 645338 28 100.0 32 ............................ TCGTACTGGTCGAGATTTCCGATTCGGAAGCC 645278 28 100.0 32 ............................ TTCGACGCCGCTAGGGTTGCCGCATCGCCGTC 645218 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 26 28 99.9 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : GACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCATCACAAGACCTTTCGCGTCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : CTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCGCTCCCAAACATCCGAATATAAAAGTTCCTACCCCGCCCGCCCGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACATTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGACAGGCCACGGTCAGCATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACGGGTACCTCCATTACTCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //