Array 1 212206-213021 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIXY010000020.1 Myxococcus eversor strain AB053B NODE_20_length_213022_cov_15.5485, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 212206 36 97.2 34 .....A.............................. CCGAAGTCACTGCACGGGGGGTTCGCCTGCACTG 212276 36 97.2 36 ..T................................. CGGCTGGTGAAGAACATGGAGAACTTGCGGATGCCG 212348 36 100.0 34 .................................... ACTCAACCCCGTGCCAGACGAGGGGGAGGGCACC 212418 36 100.0 34 .................................... TGATATCATTGACCCACTGAAACACGCGGGCTTG 212488 36 100.0 34 .................................... CATTCGACGCCGTCGCACCCCGCGTCGAGGCACC 212558 36 100.0 34 .................................... CTGGTGGCCTGCTTCATCGCGTACCACGTCCGTC 212628 36 100.0 36 .................................... AATTCGCGTTCTGGTTTGGTTGCCATGGCGTCCTTG 212700 36 100.0 35 .................................... CGTCACACAACGCCTGCTGGACTCGGAGCTGCGCG 212771 36 100.0 35 .................................... ACCTCCGAGACGACAGTGCCGCCGCCAGTCACCTG 212842 36 100.0 36 .................................... TTGACCTTCTCGTTGATGGCGCGTCGGCACTGGATC 212914 36 100.0 36 .................................... GTGAGGACCGCATCGACGTTGGCGTACGGGTGGGGG 212986 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================== ================== 12 36 99.5 35 CCGCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Left flank : ACCTGTCGCCGCGTGCGTCGGTGCTCTTGCAGGCGCGGGGGATGGGAGGGAGGCGGCACATGGGGTGCGGGCTGTTCCTGCCCACGCGCCTGCGCGTCGGCGTGGGGACCTGGCCGCGTGAGCAGCAGGGGGTGGCGGGCGCGGTGTAGGGGTTTGAGATGGGAGCAGGCGGGCCTGGGCGCGGAGACGCCCGGGCTTTGTTTGTTTCTGGGGGGCGGTGGAGTGCGGGCTCGTCGGGAGCGGGGTGTGAGGGATTGGACTTTCAAGCACCTCGGCGTGGCGGAGGTGGGGATGGGGGAAATGGGCGGAAGCCCTGGCGTGACGCGGGGTTGGGGCTCTTTGACAGGTGAATAGGTGCATGAATGGGGAAAAGGCTTGGAGATTCAGGAGGTTGGATGATGTGGGATGGCTCGCGGGTGGAGATGGCGCCGAGAAGGGTGGGGGTGCTTGAAAAGGGGGGGAGCCAAGATGCTGGAACTGCTTGGGATTCTGGTGCGGCT # Right flank : A # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 47143-46823 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIXY010000038.1 Myxococcus eversor strain AB053B NODE_38_length_47149_cov_15.1931, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 47142 36 100.0 36 .................................... AGCCAGCTGCATAGCGAATGTTGATTCGGGCCGGCC 47070 36 100.0 35 .................................... AGTTTGGACTTGCCCAGCACCACCTTCACCGCCTC 46999 36 100.0 35 .................................... GCGTACACGTTGCTGTCGTCGTCTCGGAACAGGTG 46928 36 94.4 34 .T.............................C.... GACAGCCTCCGGTTCCCTGCCCCACGAGGCCTCA 46858 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================== ================== 5 36 98.9 35 CCGCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Left flank : GTGGGG # Right flank : TTCCCGAGGTAGTTGTTGTAGGTGCATGCTTCCGCGACATGTGGAACGTCTCTTCCCTATGTCGAAGTGCGCTGGCCCTCTGGCTCTGCTTGGTGTTGTCGTGTTCCTCGGGCCCAAGGTCGGGCGCGGCCTCCACGACGGTGGTGCGTGTCGCGGCGCGTGAACTCTCGGATGGGCGCTGGGCGCTCTCGTTTCCGCCACTCCCTCCGGTAGCGAATGCGCGAGAGCTTTCTGTCGAGGAGGCCCGAGCGCTGCTCGCCGTGTTCCAGCAGGACTTCCCTCTCGCGGAGAATGCCCGGGGACGGCGGCTCTGGGCGTCCTCGCGGCAGGTGGCCTCGATGGACTCCAGTCCCTCGGATTGGGAACCGCGGCTTCGTCAGGAGTACTTGACGCGTTTTGGCCCGTCCCGGCTGCCGCTGCCTGCTTCACTGGAGGACAGCCCGGTCCTCCTCGCGCTGCGGCTCTCACCTGGCTACATGGCCCCCGGGCTCCGGGATGCG # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 79997-84778 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIXY010000026.1 Myxococcus eversor strain AB053B NODE_26_length_187253_cov_15.3883, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 79997 37 100.0 34 ..................................... AACGATCATCAGCGTGTAGTGGTGCATGTGCGTA 80068 37 100.0 33 ..................................... ACGAGTGGGACGCGCCGACGGGCCCACTGGGCG 80138 37 100.0 35 ..................................... GCCATCATCGCCACGCCAAGCACTCGGCTGGTGTC 80210 37 100.0 34 ..................................... GTAGTGGTGCTGGCCGTGCTGCTCGTGCTGGGCG 80281 37 100.0 34 ..................................... GAAAACGTGCGGCGCTCCGACGTGGCGCGGCAGA 80352 37 100.0 35 ..................................... TACAGCGACGGCAGCCAAGTCTACTCCGTGGGCTC 80424 37 100.0 33 ..................................... TGCCTAGTTAGGACAAGGGCCGTATTCACCTCG 80494 37 100.0 34 ..................................... ATCAAGCGGAACACAGAGGGAACCCCGCAGGCCA 80565 37 100.0 34 ..................................... GTCGCAGCCGCCTGCGCCGTCCCCACTGCCGTCT 80636 37 100.0 34 ..................................... TCGAACTGCTCAGCGAACGTGCGCATCTTCCGTC 80707 37 100.0 35 ..................................... GACGCGTGGCGCATGGAATTCGGCGCGTGGGCGCT 80779 37 100.0 33 ..................................... CGCCGCTGGGACGCGGCCACTGGCCACCTCAAC 80849 37 100.0 34 ..................................... TGCGCGGCGGTGATGAGGTATCGACGGCCGGTGA 80920 37 100.0 34 ..................................... TGCCTGCCGGAGCACTCCAGCAGGCCGTCGGGGC 80991 37 100.0 34 ..................................... TGCCGTGCGAGACGAAGGACCATGGGCGCGCCAG 81062 37 100.0 33 ..................................... GCTCGGGACACGGAGCAGACGCTCATCGCCCGG 81132 37 100.0 35 ..................................... TGTTTCAACAGCTCGGCGTCGTCGAAGTCGCCGAG 81204 37 100.0 33 ..................................... AAGGACACGCCGTCCGGCTGGGCGCAGCGCTGG 81274 37 100.0 33 ..................................... CCGCAGTCCCATTGAGGTCCGCATGGCGTGTCA 81344 37 100.0 34 ..................................... CTCTCGCGCCTGGCGCGCTCCTCCTCGGCGGTGG 81415 37 100.0 35 ..................................... GATGCATTGGCGCGCGGGGACGTCAACGAGCCCCA 81487 37 100.0 33 ..................................... CGAACATGGTGACTCCGCGGGTGACTGGGTGAG 81557 37 100.0 33 ..................................... CATTGGTGGGAGCCACGTTGTCGTCTGCACCAA 81627 37 100.0 33 ..................................... GAGGAAATCTGGCTGGTGCGCAACCGGCTGGAG 81697 37 100.0 35 ..................................... ACCGTTTTGACGCTCGCCCACCCGTCAGGGGCCGA 81769 37 100.0 33 ..................................... CGCCGAGACGCCTTGCAGCGAGCGCACCGAACC 81839 37 100.0 36 ..................................... TGGAGGCCACCGAGCTCGTCCCTCGCGGCCCGGGTC 81912 37 100.0 34 ..................................... CGGATGTCTGTGAGCCCGAACCCATGGAAGGTGA 81983 37 100.0 35 ..................................... AGGCCGAGCTCCAGGCGGACCTGACGCGCACCCAG 82055 37 100.0 35 ..................................... GCGGGTCCCGAGCTTGCTACAGACGTAGTCGCTGT 82127 37 100.0 35 ..................................... GAATCGTGGGCGCGCGGACAGCAAGAGGCAGACGA 82199 37 100.0 35 ..................................... GCGTCCATGGACCAGAACATCCTGCTGCTCTGCCG 82271 37 100.0 32 ..................................... TCCACAAGCGCCCCAGGGCACGCCCCACCGAG 82340 37 100.0 33 ..................................... ACCAGATCGCGCCCACCTGGAGCGGGAGTTGAA 82410 37 100.0 35 ..................................... TGGCTCGCCAACTTCAGCATCTGGAGGGCACGGTT 82482 37 100.0 32 ..................................... ACGTCCAGCCCTGCCAGGAAGACGCCGTTCTC 82551 37 100.0 36 ..................................... CAGCTCGCGGAGTCGAATCGTGAGACTGTCGTAGTG 82624 37 100.0 32 ..................................... GGCGGCGTGCCGTTGGAGCAGGTGGTGGTCCA 82693 37 97.3 36 ........A............................ GGGTTCCCGGCAGGGTCCCTGTCGTTGGCGTCCGTC 82766 37 100.0 34 ..................................... AGCAATGCGACGCAGTTGGGGCGACGGTGGCTCA 82837 37 100.0 34 ..................................... TCTTCGTCCGTGTAGAAGAGGTAGTGCCCGGCCG 82908 37 100.0 34 ..................................... CAGATTCTCACGAAGCAGCGCCAACGCACCCGCA 82979 37 100.0 33 ..................................... GCTGGCGCGGTGGCGTTGCCCAACGTGGGCATG 83049 37 100.0 34 ..................................... CGGAACGGGACCATCGTCATCAACGTCGACTCTT 83120 37 100.0 34 ..................................... GCGGTGAAGAACACGTACTTCAGCAGGTTCCGCA 83191 37 100.0 34 ..................................... CGATTCAGATTAGTGGGCCCCAGTAGTCGTCAGG 83262 37 100.0 33 ..................................... CACGTGTTCCCGCGCCGCCAGCGAAGCGCTCCG 83332 37 100.0 34 ..................................... TACGCGGCCCTCCGGGACTGCTACATCGTGTACG 83403 37 97.3 36 ..T.................................. ACGGAGGACGACCACTCGGGCCTCGTCAAGTCGCTG 83476 37 100.0 33 ..................................... TCTTTGGCCGTCGCGATGGTCTGGCGGTACTGC 83546 37 97.3 34 ....................................T CAGCGCGTCAGCACCGGCAGGAGCGCGTCGAGCA 83617 37 94.6 32 ...............T....................T TTCACAGCGCTGTCAGCCGTCAAGTCGCGCAG 83686 37 97.3 36 ....................................T GCCAACAACCGGACCACGGAGCTCTGGGTCGGACGC 83759 37 94.6 35 ........C....G....................... GTGGCGTCCAAATCGCCACGGAGGGCCAGACGCAG 83831 37 100.0 35 ..................................... GTGGCGCTCCAGCAGAGGAGCTTTCCCGCCGCGAG 83903 37 97.3 32 ........G............................ CACGAACGTCAAGGCCGCGTCGGGAGTCATTG 83972 37 97.3 35 ........G............................ TACCGTCAGAAGCCCGGGTACGTGCGCGACCTGGA 84044 37 97.3 33 ........G............................ GGCAGTCGGAATGCCGCCCCCAAGTGGTACGAG 84114 37 100.0 32 ..................................... TCGCCGCCCATGGGGGCCGGGACGCTGACGTC 84183 37 100.0 33 ..................................... CGCCACCAGGTGCTGCACGTCGCGCTAACGGAC 84253 37 97.3 30 ...............T..................... CAGGAGCTTGATCGAGCCGGAGCCGGTCGA 84320 37 94.6 34 ...............T...............C..... AAGGGATTCGCGTCCGACGCGCAGTCGAGACGGC 84391 37 94.6 34 .......G..........A.................. TGCGATCAGGGCGGCAGCCACCTCTGGGTGGTGC 84462 37 100.0 30 ..................................... CAGAAGCTTGATCGAGCCGGAGCCGGTCGA 84529 37 91.9 34 ...............A.T...A............... GAGCACGCCTCTTACCTGCTGCGTAAGTACAACG 84600 37 97.3 34 .........T........................... GCGTTGGTGCCCGCCTCCGTGCCGCGTTGGCGCA 84671 37 94.6 33 ............................AA....... TGGCTGGCCTCAAAGTCCGCCGACAGGAGTCGC 84741 37 78.4 0 ..T....................T......AGTCTT. | A [84769] ========== ====== ====== ====== ===================================== ==================================== ================== 68 37 98.8 34 GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Left flank : GAAAGGTCACTGTGCTCGTGTGTTACGACGTCCGGGTCTCCGATGCGGACGGGCCACGCCGGCTCCGGCGGATTGCTCGGGCGTGCAAGGACCATGGGGTCCGGGTGCAGTATTCGGTCTTCGAGTGTGTGCTGGAGCCGAAGGACTGGGTGGTCTTGCGCGCACGGCTGCTCGCGGAGCTGGATGATGCGAGCGACAGTCTGCGGTTCTATTTCCTGAGCGAGGATGTGGCTCGGAAGACGGAGCACCATGGCGCGAGGGTGCCGTTGGATGTGGAGGGACCGCTCATCCTGTGAGGGGCTCGCGTGCCCGGATTGGGGCGCGCGGACCTGTGCCGGTGTGGGCTCCGTCGGAGGTTCGCGTTCTTTGAAATCTCCAATAGGATTCAGAGGTTGCGCGGGGGGGCTCGGTGAGCGCCGGGTTTGGGGTCGCTCGTGGGGAGTTGGGTTCGCGCGAAGCGGCTGGATTCCCTTGGAGTTCTGGTAGCTTGGACGGGCAGA # Right flank : CGCGCAAGCTACACCCGGGTGAACGTCAGGCCTGTAGCCTTCGCCCGCTCCAGGGCCTCCTTGATGTCCTCATGGATGATGAGGGCGAGAGGCCAGCCCCCTGTGCGGAACGTCCTGGCCTCTCCCACTTTCGTCGGGTCGATGTGCAGGTCGTCGACGGCGTAGTACTGCCCCACCTTCTCAGCCAGGCCGTCTTCTGGCATCCAGAACTGCACCGCCGACGCTTTCTCGTCGATGCAGTGGATGAGCTTTGTTGCCACCAGGATGAGGTACTGGTCCGCGTGACCTTGGAGATCCACGGGAATGAGCTGTACGTCGCCAGGGGCCAGCGCCGTGAAGATCTCCGCGACCTTGATGTGGACGATGGGAACGCTGAGCGCCGTCAAGGTGAAGTCCAGCGGCTTCCCTGGATGTTGAATGGGGACCTTCAGTCCCCCTTCAACAGGAACCGGGTGCCCTGCGTTGAAATCTCGCGGGTCGTCCACCTCGCGCCCATGACG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.10,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-27] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //