Array 1 773901-772347 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYUJ01000003.1 Neofamilia massiliensis strain SIT13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 773900 28 100.0 33 ............................ TGTTAAAGGCATCAACTGCCTTAGCACCAGTAA 773839 28 100.0 33 ............................ TGATAAGGCCGACCTACTAATGTGGTCTTTTGC 773778 28 100.0 33 ............................ TGCACTTTTAGAAATATATCCACCTTGATTTTC 773717 28 100.0 33 ............................ TTGTTCTGCAAGCTTAATTCTTTCGTTGTATTC 773656 28 100.0 33 ............................ CAATTCAAAAGTTAGCTGGTCATGAAAAGATAG 773595 28 100.0 33 ............................ CTTTGTGCTAGCTTCAGTTTATCAGCTAAATAC 773534 28 100.0 33 ............................ TACAAAGGAGGCTTAAATTTTTATGGCAACAAC 773473 28 100.0 33 ............................ TTAGCAGAATTAGTTGGAGTTTCAGAATCTACA 773412 28 100.0 33 ............................ TTGGAGAAACAAAAGCCAATGAAAAGACAATGA 773351 28 100.0 33 ............................ TCACTGGATCCAGACACAGTCTTTTCAACAAGG 773290 28 100.0 33 ............................ TTGAAGCTTGGGGAAGAAAGTATGATATTAAAA 773229 28 100.0 34 ............................ CGTTACGAGGAAGGACTTGACCTTAACACGATTA 773167 28 100.0 33 ............................ TTAACAGGCAAAAAAAGTATTCCAGTTTGGCAC 773106 28 100.0 33 ............................ TCAAAAATTAGGCACGTTAATTAATTAGGTATG 773045 28 100.0 33 ............................ TTGCTCATGTTATAACTTTTTGGAACGTCTAAC 772984 28 100.0 33 ............................ TAGAAAAAGAAGTCCTAGACTGCTTTAATGACG 772923 28 100.0 33 ............................ TGTTTCTCTTCTAGCCAGGCCTCTAGCCATTCT 772862 28 100.0 33 ............................ TAGGCGAGATATCCACAGTTTAACAGCTAATTT 772801 28 96.4 33 .........A.................. TATATTTTCTAAAAACGAACTAACGTAAGAAGC 772740 28 100.0 33 ............................ TTACTTAAGTCTAGCAAAGGGGTGTATGTTTCA 772679 28 100.0 33 ............................ CTATGCTGATGCAGTATCAGAAATGATAAAGAG 772618 28 100.0 33 ............................ GCAAATGTATAGGCATACAAGTTATAGACCACG 772557 28 100.0 33 ............................ CCTATCAGAAAATGTAGCTAAATATGATCCAGA 772496 28 100.0 33 ............................ TCTTCTTTTCTCCTGAAAAATAAAATTGTCCCA 772435 28 100.0 33 ............................ TAATATGAACACAAAAATGTCCTTACTAGACCA 772374 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 26 28 99.9 33 GTAGTTCCCGCACACGCGGGGGTGATCC # Left flank : GAAAATCAAAACTCAATAATAGAAATTGGAGCCATAAAAGAGGAAAACTCTAAAATATATGAATTTTCCTCTTTAATAAAAATAGGAAAAAAGTTGCCTAAGACCATTACAGACCTTACAGGTATAAGAGATGCCGACCTTGAAAAAAATGGCCAGCCTTTAAAAAACGTCTTAGAAGAATTTAAAAACTTTATTAAAGACTTGCCACTAGTAGGCTATAATATTAACTTTGATATAAGATTTATAAACAAGGCCTTAGAAAGCTTGGAAATGGATAGGATAAGTAACAAAAGCTATGACCTACTCAGATATGTAAAAAAGGAAAAAAAGTATCTAGCAGATTATAGCTTAGAAACAGTAATAAAAGAATATGGGATCAATAAAAAAGTGCCACATAGAGCCCTAGAAGATAGCAGGCTAACCTATCAGCTATCAAAGCAAGTGAATAAATTTCAAGAAAATCTAAAATAGAAAGCTGTAAAAATAAAGGATCTTTAAGT # Right flank : TTGGATCTTACAAGATAAGTTAATCGATGTTTATTTCTTATATTTATGCAACTGGAGGCATTATAAAAGAAAAAAGTCCTAAACTCATTCCTTTTATTTTAGAGATTTTATCAAAGATTTTTATGGGTAAATATTAATTAGGGAGGAAATTATGGAAGATAGAAATATTTATAAGAGAGAAAATTTGACTTTTCAGGAATATTTTTCCTACATTAGGTCTTATTCTTTTAAAATCACTTTGGCTTTTATTATTATCATGGCCTTGGTTGCTGTGGTTTTAGTTTTTGATCTAGGTGGTTTGTCTACTCTTGTCAAAAATTATACGGGAAAGCTTATGGAAAGTCTTGAAGGCCTTGTTAATGATGATGGTAGCATTGATACCCTGGGGCTTATTTTAAATAATATTAGGGTGACTTTTTTAGCATTTTTTATTGGAATCGTGCCCTTTATTTATTTGCCAGCCTTTGTACTAGCTATTAATGCAGGAATTGTCGGCGGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGTTCCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTTCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.80,-9.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //