Array 1 86061-87607 **** Predicted by CRISPRDetect 2.4 *** >NZ_JHWP01000005.1 Lachnobacterium bovis C6A12 T535DRAFT_scaffold00005.5_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 86061 36 100.0 30 .................................... GAATCAGCAAGAGAATTAGCAAGAGAAGCA 86127 36 100.0 30 .................................... TCCATAGACCTTTTATAAGGTTACTACCTA 86193 36 100.0 29 .................................... TCATTGACGTCACCGACATATCATCGATT 86258 36 100.0 30 .................................... ATGACACTTCCGTCTTTTGCGCCAATGAAG 86324 36 100.0 29 .................................... TGTTTATATGAGCAATTCTCACGAAAGTG 86389 36 100.0 30 .................................... TTCATTGTCGTTCATCTTTTTCTCCTTTGC 86455 36 100.0 30 .................................... TGATGTTGGATGCATTGCTTGAAATAGAGC 86521 36 100.0 30 .................................... AAATCTATTTTCATACAAAATCAACCATTT 86587 36 100.0 30 .................................... AATCGCTGTCTTTTTCTACTTCTGCATATT 86653 36 100.0 29 .................................... AAGTCGCTAATATTTAAGAAAAGGAAGGT 86718 36 100.0 29 .................................... AAATGATTGTCTTTGTCTGGCACTTCTGC 86783 36 100.0 30 .................................... TAAAATGATTGTGGAAGAATTAAAGGAGAG 86849 36 100.0 29 .................................... AATTAATGTTTTATTTATTAGTTAGCATA 86914 36 100.0 30 .................................... TTACACGTCAGGTTAAAAGACAAACAAAGC 86980 36 100.0 29 .................................... AGCGACTTTAAAATCGTTGCCCGTTGTAA 87045 36 100.0 30 .................................... AGAAATATGCGATTGTAAACAAGGATATGA 87111 36 100.0 31 .................................... TTGACAAAAAAAGCTAACGGGTTTTTCAACA 87178 36 100.0 29 .................................... AGATTCTACTAGATCTCCGAAAAATTCGT 87243 36 100.0 30 .................................... TAACATGTTGCAGAGTTTAGCACTTGCTAA 87309 36 100.0 30 .................................... TGAAGATTTCCAAGAGAGAAATCAATAAGT 87375 36 100.0 30 .................................... TGAAAATAAAAGATCCTGTTGAAAGACAAC 87441 36 100.0 29 .................................... GACTCATGGCTGTTATGAGTCTCCCAACT 87506 36 100.0 30 .................................... TTGATAATGTATAACAATTTGCAGTGGACA 87572 36 91.7 0 ...........................A...A...T | ========== ====== ====== ====== ==================================== =============================== ================== 24 36 99.7 30 GTTTGAGAACCTTGTTAATTTGTATAGGTATGAAAC # Left flank : TAAACAAAGTATATATTGAGTTAGCAGAAAATTTTAAAGAGAATTATATGATGGAGATGTCTGATATTAATACAAATATAGTTAATGTTTTGGATGAATTAATGTCAGACTTTTCATATCCACTTGCCTCAGATATTGAGATGGACCCAATTGGATTATTTAAGTTGTATAGAATTCAAATGGATATGGCTAAAGAAGATTATGTTTCGTATTTGTTAGAATATATGAAATTAAAACATATGATTTGTAAAGTTAATGTATTTGTGATAGTAGATTTGAGAAGTTATATGGATGATATAGTGATTGAAGAATTATACAAGAATCTTTTTTATGAGAAGATTTTTTTAATAGTTATAAGCGGACATCAATATGAAAATCCTATAGAATGTGAGAAAACATTGATATTAGATAAGGATTTATGTATAATTAAATCGTATGATTAACGCCTGTATTCACCATATAGGTATAGGTTCGGTGATAACCTCAGATAACAATTTGAG # Right flank : TAATATGATGTTTTTTACTTTTAGGTCTAGAAAAAAACGATATCTTCAGAAATAATCCAAATCAGTTGAAATTATATATTATTCGGAAACCATTGTCAGATGTTGATTATATGCCGGCTTGAATGAGAATATTAAGAAACAATTGGCTTTTTAAAACAGATATCAAGTTGGTCTTCTGAGTGGTCCATAGATTAAAAATGCAAGTCCATGTTAGAAGTAAATGACTTGATAAGAATTTATTTTTCCAGAAAACTGACGATAAATTAGTAGTAGATAATTGATAAAAAATAACAATAAAATGAGGAATGAAATATGTTAAAACAAATACTTCATGATTGTTTTTCGATAACAGAAGATGCAGCAACTCATAATGAAATAAGGGATAGAATATTGTCAGGTGGAAAAATAACTGGAACTAATATGAGTGTTATGGTTTGTTCAATCATTATAGCATCGGTTGGGTTAAATACGAATTCTGTTGCAGTTATAATTGGAGCTAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAACCTTGTTAATTTGTATAGGTATGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //