Array 1 42439-47354 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKAB01000022.1 Lentilactobacillus diolivorans strain NBRC 107869 sequence022, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 42439 36 100.0 30 .................................... TGGCAAACCGGTTTCTGCTTTCAAAACTGC 42505 36 100.0 30 .................................... CCTCAAGATTCGAATATTTTCCATCATACC 42571 36 100.0 30 .................................... CTGACGATAATGATGGTAATACTTACTTAG 42637 36 100.0 30 .................................... ACTAACCAGCTTAAAAGAGGGTCAGTGGAC 42703 36 100.0 30 .................................... GGCATCGCAGCCATTTTCTTCAAATGCATG 42769 36 100.0 30 .................................... TGATCAAATTAGTGATGACGCGTTAGCAAG 42835 36 100.0 30 .................................... CAATACGTCAACTTTAGTGTTGCGGTTAGA 42901 36 100.0 30 .................................... AAAAGATTGACGATAAGAAGCTGAGTGAAT 42967 36 100.0 30 .................................... ATAGAAGTGCTTATTGGCCCGGTTATGATC 43033 36 100.0 30 .................................... TCCTTATCTGTTGATTTTGTCGTTAATAAT 43099 36 100.0 30 .................................... GAAAAGAAAGTTACGGGTAATCAATCACCA 43165 36 100.0 30 .................................... AACATCACTAATAAACTCGGCAAATTCAGC 43231 36 100.0 30 .................................... TTCGCTTCCGTGTGATTTTTGGGTGTACAC 43297 36 100.0 30 .................................... ATGAGCCATTTGTGCATAATACGGAGGTAG 43363 36 100.0 30 .................................... TTTCTCCAGAGGAAATGGCCTCTGGAGGCG 43429 36 100.0 30 .................................... AACCGGACTGCTTAAAAAGCCATCTGGCAA 43495 36 100.0 30 .................................... AAACAACTCGTGCACCTGGTGTAGAGCATC 43561 36 100.0 30 .................................... AATCTATTTATGTAACAAAAAAGCAGTCTT 43627 36 100.0 30 .................................... ATGATGTTTCTGGTGCAATGGTCAAGCTAA 43693 36 100.0 30 .................................... TGACCAGATTTAGCCATTCCTGTTAGCTTA 43759 36 100.0 30 .................................... ACGATATGAAGCAAGGCTTAATCAAAACAT 43825 36 100.0 30 .................................... TATTCCTCCTAAAAATCAACTTTGTAAGCT 43891 36 100.0 30 .................................... GCCGTTGTCGTCCATAAAAACAGTGCCTTC 43957 36 100.0 30 .................................... AATATTTTAGCAATTCTTCCATCTCTGCTG 44023 36 100.0 30 .................................... TTAGTGAACATTAATATTGCTGAATTGCTT 44089 36 100.0 30 .................................... GAAAGTTGTTAATAATATAACTAAAATAAG 44155 36 100.0 30 .................................... CAAGCTTGTCCGCAACATAAGCGGCAGTAA 44221 36 100.0 30 .................................... CAAGACGTTTATCACAGTATGGATTCTGCA 44287 36 100.0 30 .................................... AACGTGAGAAAGATGCCCTCAACGCTGCTA 44353 36 100.0 30 .................................... ATCTGTTGTATCTGGTGTGTTAGTGTCTTT 44419 36 100.0 30 .................................... ATGGGAAAGTTTCTAATCAATCTGGCAAGA 44485 36 100.0 30 .................................... GCAGACCGGGTTCACTACAGCCAGCGAAAC 44551 36 100.0 30 .................................... AGATTTAAAGATTCAAGAAGCAGAGTTAGA 44617 36 100.0 30 .................................... GTAAGCAAATAGCATAATTGTATTCCAGCT 44683 36 100.0 30 .................................... TTCTCATTTTTGATAATTGGAATCTGTTCA 44749 36 100.0 30 .................................... CCTCAAATGCCAATGAGATTGTTTCACTGA 44815 36 100.0 30 .................................... AATATAGGTATTGACTGGTAGTTAATGTAC 44881 36 100.0 30 .................................... AAAGGTCAGGTGAATTGTAGAGCGACGTTA 44947 36 100.0 30 .................................... AGTTCGGCAAGATTTAACTGTTGGCTTACC 45013 36 100.0 30 .................................... CTTATCGGACATAGAATTCACCACCCTTAA 45079 36 100.0 30 .................................... TTAAATCTGCAATCATCGGATGGCACCCAA 45145 36 100.0 30 .................................... ACGGAAAAGAGTGATCCAAATGCCTAAACT 45211 36 100.0 30 .................................... TTAAATATAAAAAAACAACTTCATCTGCCA 45277 36 100.0 30 .................................... GAGCAGAAGATTCGTGCCATTGCATTCCCA 45343 36 100.0 30 .................................... ATTGGTGCTGGTAGTCCGATAAGAACTTTA 45409 36 100.0 30 .................................... TTTGGTTTTCAGACATTTTTCTTACTTCAC 45475 36 100.0 30 .................................... AGTAACCAATGTGGATAAGGAGGTGTCACG 45541 36 100.0 30 .................................... AGTGGAGTGTTGCTTGATTCAATTACATTA 45607 36 100.0 30 .................................... AAATGTCAATTTAGTTTGAGTAAAATGCCG 45673 36 100.0 30 .................................... AGTCGAAGAATTGCCATGCTTAGTATCCTT 45739 36 100.0 30 .................................... GCTGCCCTTTTTATTTTTGGCTATGGGGTA 45805 36 100.0 30 .................................... AAGACAATTCTGATGAGTTAACTCCCCAAC 45871 36 100.0 30 .................................... GTGGTGAAAATGTTGGTTAAAAACGTGATT 45937 36 100.0 30 .................................... GAATATCATCTGGGATACCAACGTATATCT 46003 36 100.0 30 .................................... CATTAATATCTTCGCCAACAAAAACACGTG 46069 36 100.0 28 .................................... TCATGTGGGACTATCCAGTGCCACCAGC 46133 36 100.0 30 .................................... GTTTTGGACAATTACAGCAACAAAAAGAGG 46199 36 100.0 30 .................................... GAGAAACGTTGCTTGAGGATCCCAGAGTTG 46265 36 100.0 30 .................................... ACTGATGATATTAATCAAGCTATCTTCATT 46331 36 100.0 30 .................................... GGTCAGCACACTATTTACTATCATATCTGA 46397 36 100.0 30 .................................... TGCTAGTGGTTTCGGGTCGGCTTGCGGTGC 46463 36 100.0 30 .................................... AAGTAAAGCAAGGGTTCCTAAGTAACGATT 46529 36 100.0 30 .................................... CGATCCTTGAAATATAATCATAGTCCTTTA 46595 36 100.0 30 .................................... TCGAACCAATTATCGAAGTGGCGGAGAATG 46661 36 100.0 30 .................................... AGGCAGACGCACTCGCTTTGGCCGACATCA 46727 36 100.0 30 .................................... AAAAAAGCCATGGAAGAAAATACCAAGGCG 46793 36 100.0 30 .................................... AGTGGTCTAGGAACAGTTGTCGGGGTTGTT 46859 36 100.0 30 .................................... CTAAGGATAACGACATTAGTTCATTCTCTA 46925 36 100.0 30 .................................... TCATTTATTAAAATGGCGACTAATGACGAC 46991 36 100.0 30 .................................... CCCGCTTTGACAATGATGCTGTCATTACGT 47057 36 100.0 30 .................................... CTTAATGGCTAATAGACTTACCGATCGCCA 47123 36 100.0 30 .................................... ACCTCAGCACTCCAGCACGTGCATCCGGAA 47189 36 100.0 30 .................................... AGTGTAAGCCATATGAATTACTCAAACCAA 47255 36 100.0 29 .................................... TTTTCAATAAAAAATTAGGTTATCAGAAT 47320 35 83.3 0 ..A..........A.C........A.......-A.. | ========== ====== ====== ====== ==================================== ============================== ================== 75 36 99.8 30 GTTTTAGAAGACTGTTGAATCAATGATGTTTAGTCC # Left flank : CTTCAGAAAATCTGACCGAGCAATATGGCTCATTATTAATGAAACAACTTGAGAAAACGTTAACTGATGATCAGCGTAAAACACTTAGCGATCTAAATGACAAATTGTATACGGCAGTTCAAGAGTCGCTGTTTATGATTGATTTACCACTAGAAGTCAAAAAAGATGATGACCTAAAACGAATGTTCAAATATTGCAAAATTCACTTTAACGCTGATGCAATGCGGGATCCCTATGCTATAATTGAATCAATTCTAAAGGTTCACTTGGAGTGCGGCGAAAAGTCATGTATCGGATTAACTAATGTCGCTCATTATCTTAATCAGGATAAGATGCATGATCTGGATACACTCATTAGCACAGTAAAAATTCCAGTGATTATGATAGAATTCACAGAAATGAAGTTTCAGACGCTTTATGGAAATGCTGAATTCTACTACTTCGACGAAGACTTCGTTGATTGGCATTCTTGATTCTTAAAATACGATTATAAAAAATCG # Right flank : CAGTCGGTTTAGCGAACCGATATTTAGAAGTAAAAGTACCATTTCATTTATTTTCAACCAAATTCATTCCATCCGAGGCCACACCCATGAAAAAAATCATCCAAGCCATCCTACTAACAACAATCACCATACTATCAATCATCCTCACAGCCACCACCACCCACGCCGCCAATCTCCAACCCTACATGATCCACGACCAACGCCACATTCTCACGCCAGTCCAAAAGCAACAAATCATCCAACAGAATGAGCAATGGTCTCATCAGCGTCGGCGCCAGCAAATCTGGGTTTACACGTTTAAGCAGATGCCAAGTACCATCAAGGATGACCTCAGCGACGATGATAGTACGGGCGAAATTTCAGACGATGTTTCCACGTCAATTCTGACCAAAGCCGTTAAAAGTTATACACCGGCCGATGGTGATTATGATCGGGACACAATGATCGATCAGCGGCTTTCATCTCTAACCAATCAAGTCTCAATCTTGGTGGTTTATCCA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGACTGTTGAATCAATGATGTTTAGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //