Array 1 625014-625414 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014232.1 Actinomyces oris strain T14V chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 625014 37 100.0 36 ..................................... GTGAACGGAGCCATGACAAACTCACCAGAGTCGTAG 625087 37 100.0 38 ..................................... GTTCCTGAGCATCGCTTCTACGTAGATGTCCTTTACCA 625162 37 100.0 36 ..................................... AGGTCAGCGAGCCACTCCGGCGGCTCGACATAGCTC 625235 37 97.3 33 .....................C............... CGGATTTTAAGTCCGCTACGTCTGCCATTCCGC 625305 37 94.6 36 A...........T........................ GTCCAGGGGTCCATCCTCACCGGTCATCCCCGACAG 625378 37 78.4 0 ........T.................CCT...G.CGG | ========== ====== ====== ====== ===================================== ====================================== ================== 6 37 95.0 36 GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC # Left flank : GGCCGGGCGCATCGAAGCGGACGAATACGGTGGCGGGCACTCGACGGGGCTCCTTTGCGGCGTGATGTGTGGTGGGTGCGGCAGTGGAGGCCGACGGCGGCGCGGGCTGGTGGCGGGAGGCTGGAGCAAGGCCGTCTACCTTTTTCTTTCTGACGACACTACCGGAGGGGAGGCGGCCTGTACGGGGAGTTCGAGAGGTCGACGTTCTTCAGCATCGAGGGCCAGGAGGAGGCGGAGAGGGAGAGGCCCGGCGGCGCGCCGGTCGAGCCACGGAAGCACAATGTGTCGACAGTCACGGCTAGGAACATCGATCTTTTGGCTTGACGTCGTTGGAAGTTGGTGGCTTGAGGCGCCCGAGGGGGCGTCGGTGGCGCTTGGCGTCAGGACGCCGAAAGGTGGTTAAATAGGGGCACTGCTGGCCGGCCCCGCAGGGTGCTTGCGAAGCCGGTGGCGCTCCTGCACCCGGAAGTGGCGCAACGACGCCGTTCCCAGAGGCAGGG # Right flank : GAACTTACAAGTCCATCCTCATCTCCTTAACGAGTTGAGCAGCCAGGCGACTCAACGGAGGAAGCGCCCTTGACGCCGAGTTCGGGGCCTGACTCCGCCCCTACCATCAGGATGTACCCGCAGTCACAGGCGGGAACGTCGGCCTTTTGGCTTGAGGTCGCTGGAAGTTGGTGGCTGAAGGTGCTCAAGGTGCCGTCAGTGCGCTTGGCGTCAGGACGCCGAAAAGTGGTTAAATTGGGACGCTGCCGCCCGGCCCCGCGGGGTGCTTGCGGAGCCGGTGGCGCTCCACCCCCTGGAAGTGGCGCAACGACGCCGTTCCCAGAGGCAGGGGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACCCCGGCAGGTGACCGCCCTCCGTGTACTGGTGGAGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAACACGAGAACTCGCCAGTCATCAACTGAGCAGCCTTGGGTCAGAAAGCACCCAGCACCAGAAGGTG # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [14,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 2 639681-641023 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014232.1 Actinomyces oris strain T14V chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 639681 37 97.3 37 .............A....................... AGGTTCCCCCAGATGTTGCGCTGGAGGTATCCCCACT 639755 37 97.3 35 ..........G.......................... CTGAACACTGGCAGCAACAACATCTCCGTCAAAGT 639827 37 100.0 36 ..................................... CCCCCGGATCAGGGTTTGCCGACTGATAGAAGGCAA 639900 37 100.0 36 ..................................... CCCCCGGATCAGGGTTTGCCGACTGATAGAAGGCAA 639973 37 100.0 31 ..................................... TCTCTCCTCGCTGATCGAAATATATGTGTGT 640041 37 97.3 36 ........................A............ CAGATCTCCGACACTCAGGAGGGGATGGCAATTCTG 640114 37 97.3 36 ........................A............ CTCAACGCGAGGCTGATGACGGAGCGGGGTTTCCGC 640187 37 97.3 35 .........T........................... TTGAAGTCGCTCTTCCTGCTGGCAGTTGACGACTT 640259 37 100.0 37 ..................................... ACCCAGGTGCGCATCGTCATGAACATCTCCTTGTCCT 640333 37 100.0 40 ..................................... TCGATGCCAGGGTTGTAGTAGGTACCCATAGTTCTTTCTT 640410 37 91.9 36 ...T........T...............T........ GTCTCCGTTCGTCACTGGGTGATGAGGTTGGGGTTG 640483 37 100.0 35 ..................................... TGGTTGCCTGACCGGCCACCCTCCTCAATCCGGCT 640555 37 97.3 36 .....................C............... TCTGACTCCCCGACCACCTGGAAGTAGCGCGGCCAG 640628 37 86.5 35 ......GC.......A.....C..........G.... TTTCAGTCCGACGCGCTTCCGCGTCGGCGTCCCTC 640700 37 100.0 35 ..................................... TAATTGTGGCCCGCATTAATATCTGAGTCGATATG 640772 37 97.3 36 .....................C............... TCCATCTCGAGAATGTAACCAGCGAAGAGTATCCAG 640845 37 94.6 31 .............T..............T........ GTAGCACAAGCCCCTATGAGGAGCTGCTCGG 640913 37 97.3 37 .....................C............... ATGTCGCTGAGCTCGTAGAGGCGCATGAGTACCTCGA 640987 37 73.0 0 .........T..A..C..........CCT...C.CTG | ========== ====== ====== ====== ===================================== ======================================== ================== 19 37 96.0 36 GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC # Left flank : GATCGCCTTGGCGGTCCTGACCTTCATAGGCCTGCCGCTGAGCGTGTTCCTGGAGATCTGGTCCAACTGGGAGGCCGCCAAGGGTATTGCGGTCCGGCACCAGCGCATCGGCGGCTGGGACGCGGGATGGGGGTGGATTCTTGGCTTCGGTCTTATCAGGTCGGTCCTCATCTGCGATAGGATCTGGCTGCTCGTTGACAAGGTGGGCGGCCAGGTAGCTCGGCGTGGGAAACGCTCCTGACGCCGAGCCCGGGGACCGGATCCACCCCATCACAGCAGGATATGCCCGCAATCACAGGCGGGAACGTCGACCTTTTGGCTTGACGTCGTCGGAAGCTGGTGGCTGAAGGTGCCTGAGGGGGCGTCGGTGGCGCTTGCCGTCAGGACGCCGAAAAGTGGTTAAATAGGGGCGGTGCTGGCCGGTCCCGCGGGGTGCTCGCGGAGCCGGTAGCGCTCCAACCCCTGGAAGTGGCGCAACGACGCCACTCCCAGAGGCAGGG # Right flank : GGGAATTGCCGTGCGGCGGCTGCCAACAGCGCCGGAAAACGTTCAGTCCAACCGTCGGTCCCTTGAACAGGCCCTCCGAGCCAACCCGAACCACCCCGCCACCACGGGCGCCGTCCTCCTCGACGGCAACAAAGGCCTCCAATCCAGGTGCATTCGTGCCAGGCGAGCTCGCAGGAATTGTGATGTCTCGGGACATGGGTGACAGTTCTGTGTCAGGACTTCGGTGACGTTTGGTGTGTCGGGACATGGGTGACAGTTAGAGCCTCTTGCGGCCGCGGCCTCCGCGCTGGTTGGTGGGGTCGGGTGGGTGGTGAGAGACGTAGGAAGTGCCTTGGGGCGGCCAGGTGTACTGGATCAGGACCTCGCCATGGGGATCAGCGAAGGTGATGGTTCTGGTGTCCCAGATCGCGATGACCGTGGAGGCGGCCAGGTGGCGGTTGACCAGGAACGCGATGCCACTGATGTGGACGGTGCCGTTGCGGCCGACGGTCAGCTCGCGC # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.55, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [14,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 643050-643741 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014232.1 Actinomyces oris strain T14V chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 643050 37 97.3 33 .....................G............... GCACTGAACGCCGCAGCGGCGTAGGACTTGCCG 643120 37 100.0 37 ..................................... TATTCAGCAAAGAGCTGATCCTGGGTGCGCTTATCTG 643194 37 100.0 36 ..................................... TTCAAGCTCGCTCAGGGCATGCAATGTGTATGAGCA 643267 37 100.0 36 ..................................... ACTTGTCTTATCGTTGTCCGCGAGATGCGAGTATAC 643340 37 94.6 36 .....................G.C............. TTCATCGCTCGACGTTGCTGCAATACCAGTTTGTAG 643413 37 91.9 38 ..........G..........G....C.......... TGAACGCCCCGCCGGCCACCATCACGAACCGGGTCCTG 643488 37 97.3 37 .......C............................. GCTGCTGTGGCACATGCAGAGAACATGATGATGCCAG 643562 37 100.0 34 ..................................... TTAGTGGGCAGCGTTCTCTCGTCTGACAGATGCG 643633 37 97.3 34 .....................A............... CTGTAGCGCGTGGCGTAAAGCCTGTGTGCAGCTG 643704 37 73.0 0 ........A.........T..G....CCT...T.CGG | C [643729] ========== ====== ====== ====== ===================================== ====================================== ================== 10 37 95.1 36 GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC # Left flank : GATCAACACTACGGTTCTTATCAGAGCTCACCGCTCAATCTCAGACCACAAGTGTCACCCCCAGAACCCACCGAAGTGTCACCCATGTCCTGACACAGAACCGTCACCCATGTCCAGAGACATAACACCCTTGTCAGAAAGCACCCAGCATCAGAAAGCCTATTGATGGAACTTACAGTCCATCTTCATCTCCTTAACGAGCTGGGCGGCCAGGCGGCTCGGCGTGGGAAACGCTCCTGACGTCGAGTCCAGAGCCCGACTCCATCTCCACCGCAGTAGGTTGTGTCCACAGCCACAGTCCGGAACGTCGACCTTTTGGCTTGACGTCGTTGGAAGTTGGTGGCTGGAGGTGCCCGAGGGTGCGTCGGTGGCGCTTGGCGTCAGGACGCCAAAAGGTGGTTAAATAGGGGAGGTGCCGGCCGGTCCCGCGAGGTGCTCGCGGAGCCGGTGGCGCTCCAGCCCCTGGAAATGGCGCAACGACGCCACTCCCAGAGGCAGGG # Right flank : GGGTTTGCCATGCGGTGGTTGCCAACAGCGCCGGAAAACAGCCAGTCCGACCGCCAGCTCCTTGAACAGACCCTCCGAGTCGCCCCGAACCACCCCGCCACCACGGGCGCCGTCCTCCTCGACGGCAACCAAGACCTCCACCCCAGGTGGACTCGTGACAGGTGAGCTCGCGCGATTCCACGAAACGTCACGCAGCCAAAACGCCTCTACCGCAGGAACCGGCCAAACAGACGCACACAAAAAGCGGGCGGCACCGAGAAACTCGGCATCCGCCCACTCGCCGTTCATTCCTTACCCGCCCACGAGCGGGCAGGCAGTCATGCGACCAGACGGCCCGGCGGCGGCTCAAGCCGCCTAGCGCGCCGCCCCCCCCGATTCAGGCGCGGCGCAGGCGCAGGACGATGAGGCCGGCAGACAGCAGGATCGCGGCCACGGACAGCACGCCGATCGCCACACCCGTCACCGGCAGCCACCGCTCCCGCACACTCTGGGCCGAAGGC # Questionable array : NO Score: 2.70 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [14,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //