Array 1 619591-618239 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHEVA010000002.1 Enterobacter kobei strain 120173 contig00002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 619590 28 100.0 33 ............................ CAGTAGAAATCATAGCGGGTCTGCCTGCTGAAC 619529 28 100.0 32 ............................ TCAGCAGCAGACACCAGATCTCTCTCCCATTT 619469 28 100.0 33 ............................ CTGCGTAGCCTGGTAATTAGTACGAAGAGCATT 619408 28 100.0 32 ............................ TGTTGTTGAATAAACGCAAATACATCTGCTTC 619348 28 100.0 32 ............................ AACCGAAAAAGAAGTTACAGCCGCGCAACGTC 619288 28 100.0 32 ............................ GGGTTATACCGTCACGCGGCCAACCGAAAAAG 619228 28 100.0 32 ............................ GCGAGAGACAACCTTGTCGTAATTAACAATGT 619168 28 100.0 32 ............................ AAAGACGTCCAAGTCAACTGGATCACCGTTAC 619108 28 100.0 32 ............................ CACAAGGAAGATGATTAATGCAAATCAAACAC 619048 28 100.0 32 ............................ TCAACCCCAAATGTTGAGCGGCGCACCCCAGC 618988 28 100.0 32 ............................ ATGGAGTCAAACCGCAGGCGCCAGGCTGAGAT 618928 28 100.0 32 ............................ AAAATCACCGAAGTGGCGATCACTTCCGTTCT 618868 28 100.0 32 ............................ CTCGAGCATTTCGATAACTTCGCGGCGCTTGT 618808 28 100.0 33 ............................ CTCTTTGACTGGCTGAATACTCATCATTGCGCT 618747 28 100.0 32 ............................ TTTTTTGACACCCTACGCAGATTGCGAAGAAC 618687 28 96.4 32 ........T................... CGCCCGAGGTGATATCAATATATTTGCTAAAG 618627 28 100.0 32 ............................ GAAGGCGGAACGCTCGTTCGCAAACATCTCAC 618567 28 100.0 32 ............................ GCAGGTCACTAATCTGGGCGATATGACGCAGA 618507 28 100.0 32 ............................ TGAAAACTTTTGTCAGTTAGACCGTTTATGGA 618447 28 100.0 32 ............................ TTGTAAGTCGCTCACTATCCAGCGCCGCGAAC 618387 28 100.0 32 ............................ CGCATCAATACGCGCGGCGATCTGCGTCATAT 618327 28 100.0 32 ............................ AGTGATGGGGGATATTACGGCAAAGCCGTAAT 618267 28 92.9 0 .........A.....C............ | C [618242] ========== ====== ====== ====== ============================ ================================= ================== 23 28 99.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGGCCACGCGCTCGCTCTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGCTCATTAATTCCAGTGACGCGCAAAATGTCCGCTTTCGACATCGCCGTCCACTCATGAATATTGTCGAGGACGCTGACGGGTAATCCCTGATTGAGAAATTCAATCAGCCGCATACCTCTGTTTGCTGGTAAACCGGCGTACCGCCAAAGCGCGTTATCAGCAGGTTTCTGCGCGGGGATCCATGTTCTCATGTTGCCTCCTGGGTGATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCATAATGAATGGAATGGGTGTTTTTTAAGCAGGGTGGTTTATAAGAAGAAGGGCGTTTGACCCTAATTTTTAGTGCGTTTGTAATGCATTGATTTTAAATGGATATTTTGAGAGGGTAAAAAAGAGGGTAAAAGATGGGTTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGTGGGGATATTATTTGA # Right flank : ATAGAAAATAAGGACTCCCCTCCTTACTTTCTACACTGTCGAGCAGACAGCCCCGCGCTGAAACGAACCGCCAAATAATTGTTCAAATAATCAACAGTACCACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTGTTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTTTCGGCGCAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 630218-629408 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHEVA010000002.1 Enterobacter kobei strain 120173 contig00002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 630217 28 100.0 32 ............................ TAAGTGAGCGAGAGTAGGCCAGTAGAAATCAT 630157 28 100.0 32 ............................ GGAGAGGAGCTTATCGTAATAACGCGGAGGAC 630097 28 100.0 32 ............................ ATAACCAACCTCGCAAATAGAATAGAGCGCAA 630037 28 100.0 32 ............................ GCTGTGAGTTTTGGTGTCACCTGGCACAGTTA 629977 28 100.0 32 ............................ GGCATCGGCCGCGCACACTTCAAATCGAAGAA 629917 28 100.0 32 ............................ TGCTGCGGTGCTGCTGCTAGCATGGCCACAAC 629857 28 100.0 33 ............................ GTGGAAGCGCGTGAAAAATTACGCTACAGACTT 629796 28 100.0 32 ............................ TCAGACCGAACAAAGAGACGCTGCGCACGTTT 629736 28 100.0 32 ............................ GACGTCATCACATACGCGGCCCACGTCACATC 629676 28 100.0 33 ............................ ACTTCGCGCAGGTGCCACGACTCCACGCCGATT 629615 28 100.0 32 ............................ ACCACTGCCCGCGACGTACACCCAGTGCGCCT 629555 28 100.0 32 ............................ AGTACGGGGCGAATATGTCAGAGTTCGCCCGC 629495 28 100.0 32 ............................ TCTACAGGACAAAACTGAATTACCAGCAGTCT 629435 28 75.0 0 .....................ACCTCTC | ========== ====== ====== ====== ============================ ================================= ================== 14 28 98.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCTCAAACGCAGCCCGTATGCCGTTGCCTTGGTGCATACCTGGAAGAAATGAAAACCGGCCTCACAGAATCAATGCGTGACTTTCAGGTGGTGGAATTTGACAACGAAGCCGAACAACCGCGACAAAAAGAGTGGTTGCTGGAAGAGACAGAAACGAAATGCGACTACTGCCGGGCATTAAACCATGTGCTGCTGGTATCGCATTTTGACCGCGATATGTTGCCGCACCTGACGGGATTACTGCATGACATCACACATTCAATGGCGGCAGATGTGGTATCTCCTCATGATGCTGGAACGGGAAATTCTGTTATTTCTTGAGTGGAGTGCGCACCGCCAAGGGATGTCCCCTGGCGACAACGGAGAAACCCTTTTTTTGAGATGCTTTATAACTCATTGATTTATAATGTTTGCTTTTACGTTGCAGAAAAAAGGGTTTAGCATGGTAACGTTGCTTAGTTGCCTTAATAACAATAAGATAGCGCTGTTTTCTTCCA # Right flank : AAACCAACCCACTATAATATTCACCAAACCTATTTAAAACCTTATACCATTCAATCTGCACTCTCTGCTTCCACAATAAATAAAAAACCTATTCACGCATAAATTATATTCCATTGAATATATTATTCGTAAAAATAATATATTGTCATGAAAACATGATTTTCCACTTTATTACCACGATGATTATTATTCATTTGATGTCCGTCACATTTGTTTTCATTCGTTCTTCGCTAACATACTGCACATTCAACACCTTGAAATCAAAGCCCTTGCCATGTCCGTAAACAGCATCACCCCTACAGACTTAAAAACCATTCTGCATTCAAAGCGTGCCAATATTTATTACCTGGAAAAATGTCGCATTCAAGTGAATGGTGGCCGTGTTGAATATGTTACCCAGGAAGGAAAAGAGTCGTTTTACTGGAATATTCCTATCGCTAATACTACGGCGGTAATGCTGGGAATGGGAACCTCTGTTACACAAATGGCAATGCGGGAAT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //