Array 1 1843788-1842686 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP028300.1 Acidovorax avenae subsp. avenae strain QHB1 chromosome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
   1843787	    32	 100.0	    35	................................	ATGACTTGGCGCTGCTGGCCGCCCGCGTGCATCAT 	
   1843720	    32	 100.0	    34	................................	GCCATCGTTTCCGCGTCGTTCGCGCCCTTCTCCA  	
   1843654	    32	 100.0	    33	................................	ACCTACCTACGGATACCACAGTTTTCAGCTCGA   	
   1843589	    32	 100.0	    35	................................	TTCGTCCATCCGCCAGGGTGCGCTGGACGAGCGGG 	
   1843522	    32	 100.0	    36	................................	CAGAACGAAATCGAGGGTGGCCGGCGCGGTGATGGC	
   1843454	    32	 100.0	    34	................................	GTGCGCTTCTCGGCAAGCACCGCGTTTGCGGGAT  	
   1843388	    32	 100.0	    34	................................	GATCTGGGCATGCCGCATACCCTCAATGCATCGA  	
   1843322	    32	 100.0	    34	................................	ATCAGAAAGCCTCAGTGGTTCCACGCACTGGGGC  	
   1843256	    32	 100.0	    36	................................	AGCTTCACCGCGCCCAGGTGGCGGGACTGCGGGAGT	
   1843188	    32	 100.0	    36	................................	ACTGGCGGCACCAACTACGCCACCCCGGCGGACTAC	
   1843120	    32	 100.0	    36	................................	GGCGTCCTGCTCAGGGCCGCCTTCCACCGCGCCGGG	
   1843052	    32	 100.0	    36	................................	TCCAGCTCCTTGGCGTACTTGAGCTCCACCTGGCGC	
   1842984	    32	 100.0	    34	................................	GTCCGCCTGGGTTACCTGGACCCGCGCCAGATCG  	
   1842918	    32	  90.6	    35	.........C.C.T..................	TGCAGCGTGGTTGTGATGCTCATGTCGCCGCAGAT 	
   1842851	    32	  96.9	    36	............................G...	ATAGGTGGGGATCATGAACTGGTGATGCTCTCGGGT	
   1842783	    32	  90.6	    35	.........C..........TC..........	ATGGCAAGCGGCAAGACCACGCCGCCCCAGCACCT 	
   1842716	    31	  78.1	     0	.C...A...-..A....T......A.C.....	|                                   	
==========	======	======	======	================================	====================================	==================
        17	    32	  97.4	    35	GTCGCGCCCTGTGCGGGCGCGTGGGTTGAAAC	                                    	       

# Left flank :   CCAACGTGGTGCTGAACGTGGCCTTCGGCCAGCCCACCATGGCGGTGGACACGCACATCTTCCGCGTGAGCAACCGCACGGGCCTCGCCCCCGGCAAGAACCCGCTGGCCGTGGAAATGCAGTTGCTGAAACGCGTGCCCGCCGAATATGCCGTGGATTCGCACCACTGGCTCATCCTGCTGGGCCGCTACGTCTGCCAGGCGAGAAAGCCGCGGTGCTGGGAATGCGTGGTGGCGCCGTGGTGCGATTACCAGCCGAAGACGCCGGCGCCCTGAGGGCGGGTCCTTCCGCTCCCTCCCTTTTCTTTTTTCTTGGTGCCGGGCGTTGCGAACCCCGAGTGACCGGCTTGTCCGCCTGGGGTTCGCGCGGGTGCAAGTGGTTGAGGGCAAAGGGAATTTTTCCTGGGTGGGGGGCGGGGAGCGCGAGCAGCGGGTGGATTGGGGCGGGTTCGCGGATGTGTGGGGGAAATGGCTGGGGTGGCGCGGGTTTATAAAGGTGCC
# Right flank :  AATAACTGTACGGCTCGCATCACGCGCGAGCTTTCGGCAGCATCCTGGATGGGCGCGCGGATGGAAACAACGAGAGGCGTAGCGGCAAGATGTTCGTCGTCGATCCACGCCCCGTGCAAACATGGAATGGGTGGGTTGCAATGTCCGCCGGGTGCACCCCATCCATATCCAGCGGCATCGCTGCGCTTGCTCTGGGGCTCTTACATCGGAGACCGATTGACCCCCATCCGCATCGCCACCCGCCGCTCCATCGGCAACCCATGGGCAGCCTCCACGTCCATCACCCCCTGCAGCCGCGGCCCGGGCGGCGAGACCGGGCGGAACCCCAGCCTCGCGTAGGCTGGCGCGCTCCATGGCAGGTCGGCGAAGGTGGTCAGCGTCAGCGCCACCAGGCCCTGCGCCGCGGCATGCGCCTGCGCGGCCTGGATGAGCCTCGTGCCGATGCCCATGCGCTGCCAGTCCGCGTGCACCGACAGTTCCCAGAGATGCAGTTCCTGTCC

# Questionable array : NO	 Score: 6.13
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCGCCCTGTGCGGGCGCGTGGGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCGCCCTGTGCGGGCGCGTGGGTTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [14-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [36.7-35.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.28   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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