Array 1 1519626-1519319 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYX01000009.1 Clostridium botulinum B2 275 B2_275_contig009, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ===================================================== ================== 1519625 27 59.3 53 ......A.A.TT.C.T...AACT.G.. AAATCAATACTTTTATGATATTCTTAAAATTAAAGGATGGCTATTTTGCTATG G [1519622] 1519544 27 100.0 39 ........................... AATTGCTTTTCTAATTCTAGTTTAGCTTTTTTTCTTTTA 1519478 27 100.0 39 ........................... AATATTATTATATCTTCTTCGCGTAACAAAGCCATTTTA 1519412 27 92.6 40 ...............AG.......... AGTGGGCTAGGTGGGTTGTTCCAATTAGTTAAAACACCCT 1519345 27 85.2 0 ........A......A.........AT | ========== ====== ====== ====== =========================== ===================================================== ================== 5 27 87.4 43 GTTGAACATTAACATGAGATGTATTTA # Left flank : GCCAAAACAATTTATATAGAAGTATGCTTCATAGATAGTTCTGGAGATGTAGCCATACTTAATAAATATGGAATGAGTAGAATTGCTAAAGCAATAGTAAATGGTGTTTTAGGTACATCTTCAAATGTAACACCAAGCAAACCATCTACTGATAATAATGGGTGGGTTAACTTAGATGGTAAAACAGGTACAATAAATACACCAAGTGGTGTAAATATTAGAGAAAAGAAATCAACTTCTAGCAGAATATTAGGTGCTTTACCTAATGGATCAAAGGTTAATTTATATCGTAAAGAAGGAGATTGGATACATATATATTATCCACCACATGGAGGGTATGTGTATGCTAAATATATAAGATATTAAGTTTTAGAGGTATTTTCCTTCATGGAAATACCTTTTATTTTTCCAACCTACTTTAATTTTAGAACTTATCTTAATCATTGCTATACAAGGGCTTAGGATAGGTTTTTTATATAAATTTTAAAATGTCACAATCG # Right flank : TAAAAATGGTAGTTGTAGTGTAAACTACAACTACCATTTTTATTACTTTAAAGGAATTTTTTAACATTTATAGAATATTAAATATAACGGTTTCCCAATAGGTTAATTATAGGCCTCCTTGTTTAAGCAAAAAGAACCCTAATAAATAGGATTCTTTTTGTATGGAATTTTCTATATTGGTGTTATGTTTTGGTAGTACCACTTTTGTATTATTTCATTGAAAAATGATGTAAAATGTATGAATATTTGGGAAAAATTATAAAGGAAAAACTATATAAATGTAGAAATTATATAATAAGAATCTGTTAAGTTAAAACGATTTAACAGATAAAATAATATAAAGGGGGATGACTAAATGAAAAAAATTGCAATTGGTCTTTTAACAGCATTGATAATTGGGGTAAATGTGTCTACTGCCCATGCAGCATTTATTTGTAATGTATGTGATGCCAGGGTAATGCCAGGACAAAGCCATTCATGTTGTGATTATTTAGGACATG # Questionable array : NO Score: 5.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.40, 5:0, 6:0.25, 7:-0.24, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [37-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 2 1917543-1917116 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYX01000009.1 Clostridium botulinum B2 275 B2_275_contig009, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1917542 30 100.0 36 .............................. TTGACTTCCGAAACTATATTTATTATATAGCCATCA 1917476 30 100.0 36 .............................. ATTCATTTATTGTACCAGGATATAAATTACTATATC 1917410 30 100.0 36 .............................. TTATAGTAATAAGAAAGTGTTTTACTTATCATTTCA 1917344 30 93.3 37 A............G................ AAAGGTAATAGCTTTCCATTATCTAAATCAAGTGAAA 1917277 30 96.7 35 ...............G.............. GTACATGGACCCACCTACTGAAAATCAGTACATTA 1917212 30 100.0 36 .............................. TTGCACGTGCCATAAGGGGAATGATATCAAACTGTT 1917146 29 80.0 0 ........C........T..A.-.AA.... | AA [1917137] ========== ====== ====== ====== ============================== ===================================== ================== 7 30 95.7 36 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : AAGCGGATTTGCATTTAAAGAAGTAAAAGGTGGAGAAGAAAAAAGATTTGATATAGTAATAACCTATAATAAAAAAATGTATATTTTAGAACTTAAAATATGGAGAGGTGAAGAGTATCATAAAAAAGGCTTAATACAGCTAGCAGAATATTTAGAGCAATATAAATTAGATAAAGGGTACCTTTTAATATTTGATCTAAGAAAATCCACAAATTTAATAGGAGAAGTAGAAGAAAACTATATAGGTATAGAAAATAATAGTAAAAAAATAATACAGATTTATTGTTAAAAAGTATATAGCAGTTAAAAATTATTTCTAAATATTTTTCCAAGTGAATTAAAAATCTAAACCTATTCTAGCCATTGAAATATAAGGCCTAGGATAGGTTTTCATTATGAAATTTTAAAAAACAAAATCGCTTGGAAAACTTTCTATAAAACCTTGTAAAATCAAGAGGTCTGTGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : TAATGTGATATATAATAAGAATCATTAAAAGTCTTAGAAGAATCTAAGGCTTTTATTTTATGCGAAGTTTTAGAATGGAATATGATGGGTAATTAACTTATTATTAATAAAAATAATAATATTTTTAAAATATAAGTAGAATAATTAGTTATATTAACTAAAGGGTGTATGGTATAATATAGATAAATTTGTATAAAGAGGTGTATAAATGGAATTATGGGAACTGATTGCAACAGTGATGTTGAAAGAAGACATATATTTTGAAGATTGTGGATATATAATAGGGAAAAACATAAATAAAAGTATGCTTTTGGATAAGGATTTAAAGGAAGTACATCCAAAGAAACAGTACAAAAATTACGTGTTTAATAGTTTTTATCCTATAGAAAGAGATAAATTTTATAAAAAAGACAGGTTGTATATTTTTAATATTAGAGGTTTAAGTAAAGAATTTATAGATAAAATAGAAACTTGCTTATGTAATTTAGAAAGTAATGAAT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //