Array 1 5673-7351 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLYS01000460.1 Lactobacillus helveticus strain JCM 1005 sequence460, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 5673 29 100.0 33 ............................. CAAGATGGCATGGAATCCAGAGCAGAGCACGCT 5735 29 100.0 33 ............................. ATTCGTTTTCCAAGTAGTCATGCATGTCATCAA 5797 29 96.6 32 ............................C CATTGATAAACCTAGTAATGCACCAGTACCAG 5858 29 100.0 32 ............................. TTACGATACTCAAACACTTGCATAGTAATGAA 5919 29 100.0 32 ............................. TTATATGTAACTCCAGTTGACTCAATGGAAAA 5980 29 100.0 32 ............................. TGATTAACATCTACATACCATGTACAACCATT 6041 29 96.6 32 ............................C AGAAGATGATCTTCGTGATGAATTTGAAAATG 6102 29 100.0 32 ............................. AACACTATCTTAACCAATATTGGTCATCAGAT 6163 29 100.0 32 ............................. GAATAAAGCGTATAGATGGTACATGCGACAAT 6224 29 96.6 32 ............................C GAAATCAACTACATTAAAGCGAACTACGTTGA 6285 29 100.0 32 ............................. GAAGCAACAACTATTCCTTGCCATAAAACACC 6346 29 100.0 32 ............................. AACATTAATCTTCCCAGCATCTAATGTACCAG 6407 29 100.0 32 ............................. AATTTGATGCAGAAATACTTGCGAGAAATTAA 6468 29 100.0 32 ............................. TCCAATAATGTATCGTGATTGATTCTGGTAAT 6529 29 100.0 32 ............................. GAAATTTTATTTAAGTAGCGCCAAAGAGTGTG 6590 29 100.0 32 ............................. TAAAAAAGAAGCTGGTGTTGAAGTTACTTTTG 6651 29 96.6 32 ............................C GATACTACCAGCGCCACTATTGCCATCGCTGG 6712 29 100.0 32 ............................. GTTATTTAATTCATTTGTTTCACGTTGTTTCA 6773 29 96.6 32 ............................C TGGAATATAATTTCTCATGATCGTCTCCTATC 6834 29 96.6 32 ............................C AAAATATCCTAAAAGTCGATAATTTTCCTCTG 6895 29 100.0 32 ............................. ATAAAAGCTCGTTCTTATAGAAAAGCCATGCA 6956 29 100.0 32 ............................. TCACTAAAAAGATATTGGAAAATAGTTGAATT 7017 29 100.0 32 ............................. GAAGCTCACCACACTAGAGCAAGTTCTTATAT 7078 29 96.6 32 ............................C TTCACTCATTTTAATGAGCAAGAATTAAAGGA 7139 29 96.6 33 ............................C CCCACGCTCGCCGCTGGGCAGGAAGACCAAATA 7201 29 100.0 32 ............................. ACTCAGCCATTTTGACGACTTCGTCAATTGAG 7262 29 100.0 32 ............................. ACTATACTTAATATATAAAGAACTATGTCAAA 7323 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 28 29 99.0 32 GTATTCTCCACGTATGTGGAGGTGATCCT # Left flank : GCTAGTTAAGTAGTGATATCCCTTTTTAGCATGATGATCAACTTGAGTTAAAGCAGCATCCCTTATAGATAGTAGCATTGTGCTTTAAGCGAATGATCTTAGGATTAGATGAGAGATAATCGCTCTTATTGAAAGCTGGAGCTTTCTTTTCTGTAGTAGAACTTTGAGACTAATTAGAGTTCTGTACTACTTGAGTATTTGATTGAGCATCGCTAACAGCATCGGCTTGAACGTGATTAGTAGAAACAATTCCTGCACCAAGCAAAACTGCCACGATAGCTGTGTTCCACTTTGTCTTTTTCAACATATATTTTCTCCTCCATAATTTTTGGGAATTCATTGGTTATTTTACTCGTGTTTTAGAAGTTTTTAAATTAGGAAGGAAAAATTTAAAATGAGTAGAAGATATAAATAAAAAAGAATAAAATAAATAGGATGAAACTGAATAAATTTTAGTTTTCATAAAATTGAAATGGCTCAATGATAAGGGATCTTTTAGT # Right flank : TAAAAAAACGAGACAATACATATTATGTGTATCCTTTAGAACACGATTTACTGATAAATGATGATGCAGCTCATGCTTTAAAAGAATTACCGGCAAATTCAGTTGATTTGATATTTACGTCACCACCTTATTACAATGCTAAAACAGAATATAGTGAGTTCTTAACATATGATAAATATTTGGCTTTTATCAAAGAAATTGTTGAAGAAGCAACCAGAGTTTTAATACCAGGAAAATTTTTTGTAATGGATTCATCTCCTGTATTAATACCTCGAATTGATAGAAATCATTCATCTACGAGATTAGCTGTACCATATGATATTCATAAAATCTTTATGGATTTGGGCTATGAATTTATTGACGACATATATTGGGTTAAACCAGAGGGTGCTGGCTGGTCAGCTGGAAGAGGCAGAAGGTTTGCAGCTGATCGTCATCCTATGCAATATAAAGCTGTTCCAGTTACTGAAAATATTATGGTATATAGGAAGAAATCAGAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.40,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //