Array 1 600130-602859 **** Predicted by CRISPRDetect 2.4 *** >NZ_SAIP01000001.1 Burkholderia sp. ISTR5 AGENICAA_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 600130 28 100.0 32 ............................ ACCCGCATGTCGCTCCGAGCGACTGTTATGCG 600190 28 100.0 32 ............................ GGGATGGCAAGTGGCGGCCAGTTGAACCCGGC 600250 28 100.0 32 ............................ ACGGCGCTACTCAGCAACGAGCCGTAGTCGGC 600310 28 100.0 32 ............................ CCCATCACGGGGCCGTACAACGGCGCGGCCGT 600370 28 100.0 32 ............................ TGCGCGCGCACCGCGCCGAGGTCTACGTCGAG 600430 28 100.0 32 ............................ TCCACCGAAGCCGCGACCATCGCGTCGGCGAC 600490 28 100.0 32 ............................ ACCAAAGGACGACGGCGCTAACGACGAAAAGC 600550 28 100.0 32 ............................ ATGAGGGTGGCTGTCGCGTTGAATCGGTTGTC 600610 28 100.0 32 ............................ TCTCCCGCATCAGCAGGGGCGCGGCCGCGATA 600670 28 100.0 32 ............................ ACGGAATAGCCCGATCCCCTCGGGATATTCAC 600730 28 100.0 32 ............................ GTAGTCGGCGCTCTGCAGCGCAGCCGTGAGCA 600790 28 100.0 32 ............................ CGTGACGCCGGCCAGCTCGGGCAGCCGCGTGT 600850 28 100.0 32 ............................ ATGTTGATGATGACGCGCTGACGCACCGGGTC 600910 28 100.0 32 ............................ AGCACCGACTCCTCCCAGACCGGGAAACCATC 600970 28 100.0 32 ............................ GTGAGGAAGGCGAATATACGGCCACGCTTGCG 601030 28 100.0 32 ............................ GGCCGTCGGGCTCGGCTCGCGCGCCTCGGCCG 601090 28 100.0 32 ............................ TTCGCGAGCGCGGAGCGGATCTTGTCGCGCAG 601150 28 100.0 32 ............................ TCGAACGCGCGCTTCCCTGCAAGCGGTTTAGC 601210 28 100.0 32 ............................ TCGGCAGCAGCGTCGGCCGCCTCGGTGTCGTC 601270 28 100.0 32 ............................ TCGTCGAGCTGATCGAGGAAGTGCAAGCCATG 601330 28 100.0 32 ............................ TTCCCTGCATCGCCGGCGCAGTAGCGCGCCCA 601390 28 100.0 32 ............................ AGTAGGTCAGGTCAGTTGCATCGAAGGGCGCG 601450 28 100.0 32 ............................ TTTCGACTGCGGCCGACAACTTCGAGATCAAT 601510 28 100.0 32 ............................ TGAAGAAGACAGAGGCGAGCGCCCCGCAAATC 601570 28 100.0 32 ............................ GTCCCTTTGCCGCCGCCGAGCAGCCGGCGGAT 601630 28 100.0 33 ............................ AGACCGGGAAACCATCCAGTTCGCGGATCGCGT 601691 28 96.4 32 ...............T............ ATCGCTTACCCGTCGCATGACACCTCCTGTTG 601751 28 100.0 32 ............................ GTAAAGAAACGACCTCTCACATCCGAAGAAAT 601811 28 100.0 32 ............................ TGGTGAGCGCGACTGCCGCATCGTCCAGGCGC 601871 28 100.0 32 ............................ GCTACAGGAGAACGACGTTGAAAACGCCAACG 601931 28 100.0 32 ............................ ATCCGCCTACAGGAGACGGAACGACAGCAGCC 601991 28 100.0 32 ............................ GCAGAAAGCCGAGTCACTCGGGACCACCTTGC 602051 28 100.0 32 ............................ ATTCGAACGCCAAGACGTTGGCGCCGCTCCTC 602111 28 100.0 32 ............................ TCAGGGCGCGCAGGGTGGAAAGGGAGGCGAAG 602171 28 100.0 32 ............................ AAGGACCGGCTCCGCGTGCGCACAAGTTCGAA 602231 28 100.0 32 ............................ GATACAGCGCGTTGCGCAGCGCCGAGTCGAAC 602291 28 100.0 32 ............................ GCTGGCGAGACGACGAACCTCAAGGACATCGC 602351 28 100.0 32 ............................ TCCAGCTTCGGTGATGCGCGCAAACTCGATGA 602411 28 100.0 32 ............................ ACCACCAACGAGAGCAGCAAGCCGGCCTGGAC 602471 28 100.0 32 ............................ TGCTGAGCAAGAACGAGCGTTACTACTACGAC 602531 28 100.0 32 ............................ AATAGCCGGGATAACGGAGACGTGATAGAAAT 602591 28 100.0 32 ............................ TCCGGCCGGAAGTCGGCCGCCGGCGCCGGCAC 602651 28 100.0 32 ............................ TCCGTGTTGAGAATTACACCAAGATCGTCTGC 602711 28 100.0 32 ............................ ATCAGGTCGTCCACCTGGCGATCGAATTCGTC 602771 28 96.4 32 ............A............... ACCAGCAATCCGCGCTTGATCAACTCGACGAG 602831 28 92.9 0 ...........T.C.............. | T [602855] ========== ====== ====== ====== ============================ ================================= ================== 46 28 99.7 32 GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Left flank : ATGGTTTGCATTCGCTGATGGCGCAGTCCTGGCTGCAGGGGATGCGGGATCACGTGGCGATCGCGACGCTGGCGCCCGTGCCGGACGGCGCGATGCATCTGGTCGTGCGACGACGGCAGTTCAAGACCAACGCGGACCGTCTGCGGCGGCGACGGATGCAGCGCAAAGGGGAAACGGCCGAGCAGGCTGCCGCGCATATTCCCGATTCCGTCGAGCGTCGGCCTGATCTTCCGTATGTGCGTCTACGCAGCGCGAGCACGGGACAGGTGTTTTGCCTCTTTGTCGAGCAGGGGGGCGCGGTGAGCGAGCAGGTGCCTGGGGCGTTCAATGTCTATGGGCTGAGCCAGGGGGCGACGGTGCCCTGGTTTTAACCCTTTTCTTGGGCTGATTTGGTTGGCCTTTGAAATCAATGGGTTAGCGAGAGGGTGGAAATTTGGGTGGTTTGCCCTTTCGCGGGTGTTTGCTGTTTGGAAACAAGGGGTTGGAGGGGGAAGGGGCTA # Right flank : ACTGCAATATGAAAGTACGGTAGACGGGCAAGTTTTGCCTCCAGCGCGCGTGTTTTAAAATCGCAGCGCCAACGGCATCGTCACCGAAGTCGTTGATATGACGAGGCATCCTCGCAGACTGGCTCGAATACCGAGTCGTCCGCGATGCGCGCATGTTCGCACCCGATCGCGGCACAGGCAGCGCCACGAACCAGACAGAAAACAGGACAACAGGCCGATGACATTCAATCGCAAGATGGCGCAGTGGACGGCAGCCGCATTGGCCGTCACCTGCTTGCAGGTGACCAACGCGAACGCACAGACCTTGAACATACCGCTCGGCACACCCGACGGATTCTCCGCATCATCGATCAAGAACGTGGGCCAGGACCGCTATTGCATCAGCGGCCGCGTGTATGACGACGCGGGGCCGAGCAACACGGCGATGGCCGTGCTGGTGGACGCCCGGCATCGTACCGTGTCGTGGAAGACCTCGATCCCGCATCCGCGCGACTACGCCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //