Array 1 99090-97449 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYER01000007.1 Paenibacillus aquistagni strain St-s, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 99089 32 100.0 34 ................................ GTCAAGTAGTACCACAGCGCAGGGATCTGCTTCA 99023 32 100.0 35 ................................ ATCAACGAACATTTGCGACCGATCATTGACACATA 98956 32 100.0 33 ................................ ATTACGAGCTATGCGGCAAGGATGGGTGGCAAC 98891 32 100.0 34 ................................ ATCAAGGAAGTGGAGTCAAAGAGGCGAACCAAAA 98825 32 100.0 37 ................................ AAGTCCGAAGACGGAGTATTCAAGAACTATTGCTTTA 98756 32 100.0 38 ................................ TGACTGATCCCAACCCATATCACGCGATATATCAAGCA 98686 32 100.0 33 ................................ GAAACGATCCCACCGATGCCATGCGTGAAGGTG 98621 32 100.0 37 ................................ ACCGAAATGATATTCGGCAATGCTGCGGAAGTATCGA 98552 32 100.0 36 ................................ AACGATCCGGGACAGACTGGCTATTTTTACATTGAG 98484 32 100.0 35 ................................ GTCTAGGAGTTCATCAGGCGCATGCTCAGCGGCTG 98417 32 96.9 35 .............C.................. GTTGGTTGAGGTTGAATCAGTGGATATCATTGAAG 98350 32 100.0 34 ................................ TGGAGCTTTTGCAGATAGCCTTACATCAAGAGGT 98284 32 100.0 34 ................................ ACCGATTTTAGTTAGTTGATTAGGCAGATTTCTT 98218 32 100.0 37 ................................ AGAGATGATCGGCATATTAAACCACCTTCACAACGTA 98149 32 100.0 35 ................................ ATATCAAACCGTTGCCTTGCTGATCTGGGGGGCGA 98082 32 100.0 35 ................................ CTTACCACCAGATGTCACTATAAGTCACGATTGTA 98015 32 100.0 34 ................................ TTTTGTGTCCATTGATTAGCGGTACATATTTCCC 97949 32 100.0 35 ................................ TGACTTGCAATGCGGGCATCTCGCCTTTTCTTCTT 97882 32 96.9 34 ............A................... GCTGTAGGGTGTCTGCTACGGCGTATTACAGATG 97816 32 96.9 37 ............A................... AAACGGAGGTACTGATCAAACCGTTCCCCGAGCCTTT 97747 32 96.9 37 ............A................... AGAAAGCGCTTACAGTGGTTAGCATAACGAACCCCCT 97678 32 96.9 35 ............A................... TTTCAACAGCATCAACAATAGCACTAGATGAAAAA 97611 32 96.9 34 ............A................... TATAAAGCGGTGTCCAAAGCTGGTGATACCTACA 97545 32 96.9 33 ............A................... AATGTTTTGACAGTCCGATATAGCCTCGTCAAG 97480 32 96.9 0 ............A................... | ========== ====== ====== ====== ================================ ====================================== ================== 25 32 99.0 35 GTCGCACCTTACGTAGGTGCGTGGATTGAAAT # Left flank : GCCAGGACTGACGAGAGAGATTGCCGAGAACTCAATCTATGCGTACATCGAGCATACGCTGAACCTGCAGATCAGCTACGCCCGCCGTGTCATCGAGGTGCAGCCGTGCAGCGAGGATGATCGCCAGTATCTGGATTTGAACGGGACGGAATATGTGGTCGTTGTCAAAAACTTTACGTATTTGTACGATGGAACGCAGTTCGAATATACGGAGTCGAGAATGCGGCTCGACAAATTCTATTTTTCCGATATCGCGCGAAGATCTTAACGTGAACCGCAAGTTGAGCAGCTTTGCTTATCAAGAAGGACTTGTTATCGCTGGTGCGAATGTATAGCTCACATGATTTCCCCGGGACATTCGCACCAATTATTTTACAAATAATTCTAGAATGATTGCGAATTTGTAATATCTTTCGTTTGTAAGTATATGAATAAAGTTATAAATGGATTTTTGTGTTATAATTAAGGGTGATTTTTCTATTTTTTAACCAAAATTCGCA # Right flank : TGTGCAGTGAACACCGACTTACCCGAACCGCCGCCGGTCGCACCTTACACAGGTGCATAACCCAGCTCACAGTCCTCAACTGCAAATCAACACACAGAAAGGTGCACTCTCCGCGAAAAGGAAGAGCGCACCTTTTTACTATCACAACTTAATCTCTATCGCTTACACGTTGCCCTACAGGGATTTTACTTCAAACAACTCCTGCGATACCCCCTGCATAAAGGCGGTCGGCTCACCCGCATGGAAGATGGTCAGCTCGTGCATGGCACGTGTGCAAGCGGTGTAGAATAGATTGCGTTCGCCTTCGTCGTTGAATTGCTCAGCGGAGGCGTTGTAGATGACTACCGCATCGAACTCAATGCCCTTCGCCAAGTAGGTCGGAATAATGACAAGCCCTTTGCTGTAGGAGCTGCTTTCCTTCTCGACCAAGCGGAAGGGCAGGCGATCACCAATTCGCTCCGCTGCTGAGCGCGCCTCCTGAACCGTTTTACAGATGATCG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTACGTAGGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACCTTACATAGGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTTACGTAGGTGCGTGGATTTAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 171555-170253 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYER01000007.1 Paenibacillus aquistagni strain St-s, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 171554 32 100.0 33 ................................ GTGATCAACCAGCACGTCCGACATCGGCCTGAA 171489 32 100.0 35 ................................ CTGATCGTCGGGCTGTGACAGCACGTTGGGACCCT 171422 32 100.0 36 ................................ GCATTGTTATTGACCTGTATCGGCGTTTACTACTTG 171354 32 100.0 32 ................................ AAAAACGAGATGAACATGGATTTTATATTAAC 171290 32 100.0 35 ................................ GATTTTTTTACGTTAGATGCACTTAAAGATGGCGA 171223 32 100.0 34 ................................ AAAATAAAAAATACTACCAGCACCAAGACCCATC 171157 32 100.0 33 ................................ AACATATTCGTTGTCGTTGAGAACACAATTTTT 171092 32 100.0 34 ................................ CATTTCCGCGACACCTTCAAGGATTTTCTTGCTA 171026 32 100.0 33 ................................ GAACGATCGATGATTTTTTGATTTAGAAGCTCA 170961 32 100.0 36 ................................ AGATTTAGGTAACCGGAGTACTTTATCAATGCTCTT 170893 32 100.0 33 ................................ AACTCTAGAGAGCCATATGAGCCGACTGACATG 170828 32 100.0 36 ................................ AACTAGATCACGTTCAGGGGTTAATCTAGTTTCCGA 170760 32 100.0 34 ................................ AATGACTCAAGTATACCGCTGGATGTGTACGATT 170694 32 100.0 39 ................................ GCCTTCGGTGCTTGCCTATACGCATCGAGGACTAGCACC 170623 32 100.0 39 ................................ TACAAGGTTGGGAAGCTGTCGGACTTGATGATAATACAC 170552 32 100.0 35 ................................ CATGTACACAATAGGCTCACCTTGCATTTGTGTTT 170485 32 100.0 38 ................................ ACTATGCGGCTTTCATAGTCGGATCAGGTTTATCGGCA 170415 32 100.0 33 ................................ CTCCCTAGTAGGTAGAGTTAGATAAATAGCACC 170350 32 100.0 34 ................................ GACAATAAAACCCTAACATCATATGTTATTATTG 170284 32 84.4 0 ...........T....A..T.CA......... | ========== ====== ====== ====== ================================ ======================================= ================== 20 32 99.2 35 GTCGCACCTCACGTAGGTGCGTGGATTGAAAT # Left flank : GTGGAAGTAGGTGACAAGGTTGTTGGTGTTAATCACTTACGATGTTCACACAACTGATAGTGAAGGTCAAAGAAGACTGCGCATGGTCGCGAAGACGTGTCAAAACTATGGTCAGCGAGTTCAGAATTCTGTCTTTGAATGTATTGTAGATGCAGCACAATTTACTAGTCTCAAAATTCAACTTGCTGAGATCATTGATCCCACGCAAGATAGTCTTCGATTCTATCAAATGGGCAACAACTATAAAAATAAAGTTGAGCATATGGGTGTGAAAGAATCGATTGATTTGGAAGGACCACTCATTTTGTAGCCTGCTCAAGTGGTGCGAATGTATAGTGCACATAAAATCCCAGGGACATTCGCACCATATAATTTCTATTTATTGCCAATACTTGCGAGAATTGATGTGAAGGTGATCATTATTTGATTGAAACGATCAAATAATAGGATGATTATTTCTTATTTATGATCTGAACAATGATTTTTGCTCGATTTTCGCT # Right flank : GATAAGACCTCGTCTAATTGTGAGACAAACCAGGTATAATAAGAACTATAGTGGCAGGCTGAATAAAGAAGGTGAACAGTATGAGGCTGGAGCAGATTGATCAATTAAAGACAGAATTGGATTCATATCGACCGCTTCCGCCCTCCGCGGTCCGAAATCTTGAGCAATTTTACCGAGTAGAGTGGACCTACAACTCAAATGCCATAGAGGGAAATACCTTAACTCTACTAGAGACTAAGATTGTTCTTGAGCATGGATTAACGATAGGTGGGAAGAAGCTGCGGGAACATTTTGAGATTATTAATCATGCTGAAGCAATCGATTATCTACAGGATCTCGTTCAGCAAGGTCAAGAACTGACACCGTATATCATAAAATCCTTACACCAATTGGTTCTTAAAAATATTGCGGATGATGCAGGAAGCTATCGGATGGTCAATGTAAGAATTTCAGGGTCACAGCATGTACCTCCGCACTATACTTTAGTACCTGAACAGATG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCACGTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTTACGTAGGTGCGTGGATTTAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 184868-183285 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYER01000007.1 Paenibacillus aquistagni strain St-s, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 184867 32 100.0 35 ................................ ATAGCATGGTAGAGCATCTGGAAGACTGAGCCGTC 184800 32 100.0 35 ................................ AAGTGCTCGTTGTCCTCGACGTTGTAGCCCTCAAA 184733 32 100.0 33 ................................ AAGGGATTGAGTTTTGCGGCGACGGTGCCTGAT 184668 32 100.0 35 ................................ TGCATCAAGCTCGGGTTGGCGATCCTCACGAACGC 184601 32 100.0 37 ................................ TCTACATAAGTTGTTTCTAGGTCACAATATTTATGGC 184532 32 100.0 36 ................................ GTGAGTGGTTTTGCGGATCGGACATGCTACGGGCAT 184464 32 100.0 33 ................................ GATTCCTATCGAGTGTAAACAAAATAGCTGCTG 184399 32 100.0 37 ................................ ATTAAACCTGTATTGCAAAAATGGAATATGTTAGATA 184330 32 100.0 37 ................................ CATTTAATGTTTGTCTTCCTCCTCTAAACGAGAGTCG 184261 32 100.0 35 ................................ TCGCCCCTGGCAAAGTAGGCTACGAAAGTAATGAA 184194 32 100.0 34 ................................ GGGAGCGGATCGGCTACGCCAACGCAGATAGATT 184128 32 100.0 37 ................................ TCTAGTCCGTCGCCTATCCTAGTATGATTAAACGCCT 184059 32 100.0 36 ................................ TCCTTAGTGGGTGATATACGACTTGCCGCAGGTGTT 183991 32 100.0 37 ................................ AGTCAATACTTAAAACCTAAATACCGTTGACTTTTTA 183922 32 100.0 36 ................................ GATCAAGACGACATGGTGTCCAGCGAACTGCCTGTG 183854 32 100.0 34 ................................ GGGTATCTTGCTATGCAAATAGTAGTCATCAAAC 183788 32 100.0 33 ................................ CATTTTCTGTGGGGCGGACGCAAATTTCGTAAT 183723 32 100.0 33 ................................ TATTCATGTGATGCGTGCGAAACTGAAATTTGC 183658 32 100.0 38 ................................ TTACGATCTAACTCAGGGAGCTCGAAGCTCATTTGATC 183588 32 100.0 35 ................................ CTGAAGATGGTTTAGATAAAGACGGCAATGAAATT 183521 32 100.0 38 ................................ AGCACGAAGACGGCAGCATGACAGAGTTGGACAAGCGT 183451 32 100.0 34 ................................ CAAAAAGCAAATGCAAGAGACTAACAAGAAAATC 183385 32 96.9 37 ...........C.................... GAGGAAGTCATCGCACAATAGGTTCACATATTCGATA 183316 32 93.8 0 ...........C........A........... | ========== ====== ====== ====== ================================ ====================================== ================== 24 32 99.6 35 GTCGCACCTCATGTAGGTGCGTGGATTGAAAT # Left flank : AATCGCCCACAACAAGATATAAAAATTGGTAAAACCATCATAATAGAGAAATGTTGCAAATGTCAAATTTATTTTTTGTAAGCATCTGAGGGTAGAGCGGTCGGCTTAGTTCATGGTTGATGCTTCTAACGTTTGTCTTCTTTATCCCATCAAATGCCTTGATTAAGGTTTCAAGCTTGAATTTTTAATGAGCGAAGCAGTCCTTTTAGACTTGTGCCAGCACCCAATGTGATAGAATCATAGATATGACAAATTAGGTGTAATATACTAATAATGATGGTGTAAAAGTCTTAGCCTTCCTAGCTGAGGAGGGTGTGAGACTGAATTAGATTGGTGCGAACCCCAAGTGCACATGAAATCCCTGGGGGATTCGCACTTCGCTCTACGCAAGGGCTGCGGGCATTTTTGAGCACACATGACATCGTCAATTTGCATGAAAAAGTGTGATTCGCACTATTGGGGCTCTGAGCCCTTGTGCAGCGCGGCCTCCCAGCGCCGCT # Right flank : GAAGGTAGCGCACTTGAAGAGAAAACAACATATCCATTCCCTGTAGACTATCAATTGGAGTGTGTGAACGAAAAGCGAGTGTGTGTGCACTCGCTTTTTTGTCTGAAAAGAAAGAAAATAACTCGGATATTGAATCGGAACATACATTCTCTGACAAGATGCTGTCATCCTATTCATTTATGATAGAGCTAAAGAAAGGGAGGGAGAGCAATTCGTGACAAGTGAACAACAACTTCATCCGAATGTGATTCCATATTGGCGTATTACTCGACTAATCTCACTTTTTCAAAAGTCCGTGATTGCAGGGATCCCCATTACTGTTCATCTCATTTGGCTGCCCACATCGACATGGATCCTATATGTCACCGTTACTTATGTTTTATATTTATGGCTTACTACTCTATTTTATATTTTCTATGGTGTACGGTACATGTATATCCGCAGAGGATACTTGCTGACGAATGACGAGATCGTAATACGTTGGGGAAATATTTGGGCCG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCATGTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //