Array 1 3024350-3028288 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFRW01000002.1 Acinetobacter baumannii strain NCTC12156, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 3024350 29 96.6 31 ............................G TAACGCTGGTACTCTGTACGTTCTACGTTAA 3024410 29 100.0 31 ............................. TCAAGAGAAGTTTTATAGTGTTCGTGTATCT 3024470 29 100.0 31 ............................. TTCACTGGATTACGTTCTAAGCCTTCCTGAA 3024530 29 100.0 31 ............................. ATAAGCCTTATGAGGTAGATACTTCAAAAAT 3024590 29 100.0 31 ............................. ACTCGGTCACAAGGCGTAGTCTACGGTTTTT 3024650 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 3024710 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 3024770 29 96.6 31 ............................G GTACAAGCCATCACATGTATCTGCTAGTTCA 3024830 29 100.0 23 ............................. ACACATGCCAGATGGTTCAAATG Deletion [3024882] 3024882 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 3024942 29 100.0 31 ............................. GTAGGAAGCTCTACATCTAGTTTTAAATAGG 3025002 29 96.6 31 ............................T ATGAGTGAGGGAGTAGCAAATGTCTGAACAA 3025062 29 100.0 31 ............................. AGAAAGCTGAGCAATTGCCTGCTTTGCCTAT 3025122 29 100.0 31 ............................. ATCCCATTAAAGAAATCATTTTGGTCTTGGA 3025182 29 100.0 31 ............................. AGATCAGAGGCACCAAGCAATGCAGACTCCC 3025242 29 96.6 31 ............................T TTACCCTTGCCATGCTTGCCAGAATTAGAAT 3025302 29 96.6 31 ............................T ACCACCCATTGAACGTTAGCCATATGAGCAA 3025362 29 96.6 31 ............................T TCCATGCTTCACATAGAAATTCATTGCAAGT 3025422 29 96.6 31 ............................T ACTGCTTCCCAAGTCAGTAAAATGATTGTTA 3025482 29 100.0 31 ............................. CAGTAGTATCATTTCAATCGAGTAACGTTGA 3025542 29 100.0 31 ............................. AAAAGACCCAAAGAAATTCGCTCGTTTCTTT 3025602 29 96.6 31 ............................T ACACGGCGATCTTGTTTAATAGTCTGAGTTT 3025662 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 3025722 29 96.6 31 ............................T AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 3025782 29 100.0 31 ............................. GAAACATCTGTTATTTTTATTGATGAGGTAC 3025842 29 100.0 31 ............................. CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 3025902 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 3025962 29 100.0 31 ............................. AGCAAAATTCAAAAGAATTACCCCAGCCAAG 3026022 29 96.6 31 ............................T TGGTGTGCCTGCGCCCACTCAAGCCATGATT 3026082 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 3026142 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 3026202 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 3026262 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 3026322 29 93.1 31 .............C..............T TTTGTTTATACGGTTAATAAATCAGTACAAT 3026382 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 3026442 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 3026502 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 3026562 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 3026622 29 96.6 31 ............................T AGATAATGTTGAATGGGTTGAAACTACCTAC 3026682 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 3026742 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 3026802 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 3026862 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 3026922 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 3026982 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 3027042 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 3027102 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 3027161 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 3027221 29 82.8 30 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTT 3027280 29 82.8 31 CG..C.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC G [3027282] 3027341 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 3027401 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 3027461 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 3027521 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 3027581 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 3027641 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 3027701 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 3027761 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 3027821 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 3027900 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [3027924] 3027960 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 3028020 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 3028080 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 3028140 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 3028200 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 3028260 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 66 29 94.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGGATGGCGTCAATTGAACTGATAAAACAAATAATTGTTTTTTAAAGTTAATTTCAATTCAAAAAATAACAGTGTACACAATAGTGTACAAATTATTTGTTACTAGGGCATTTCTCTGAGTTTAGTTGTCATGCTGGGTGACGAACTCAGGAGTTAAAAACACTCCTTTTAGTGGATCGGATTATGAGGCTCGTTATTTGGCTTCAATAAATTTATTGAGCGCAAAACCATATTTGGTGATTGGATTTTAAATCTTGAATTAACTTAGCCGTTCAAGTGGCTGATTAAGTAGCTTGGTCGCGTTTTAAGTGTGAGCAAGTTATAAAAATCACGAAATACTTTCGATTGCAGATACGTGCATCCAGTCGCGTGTACATTGCCGAAGTTGAGGATTTAGATGGTGGGGGGTATCCCTATGTTCAGGTTATTTGCAGAAGTA # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-69] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //