Array 1 5172-162 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXYI02000112.1 Clostridium sp. HV4-5-A1G strain HV4-6-A5C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 5171 30 100.0 37 .............................. CTTTTTATAGGAGTTGTAATATGCTGGTTTATATTAG 5104 30 100.0 37 .............................. GCACTTGCAAATGCACAAATGAATTTAGATAAAGCTT 5037 30 100.0 36 .............................. TTGCCTTTTTTAATTCCATACATTACAGAGCCAGCC 4971 30 100.0 37 .............................. GCTTTTCCCCTGCCCCTATTTTGAGGTGGGGATATTT 4904 30 100.0 37 .............................. ACCCTTGAGGAACAGAATAAAATAATATTGAAGCTTG 4837 30 100.0 36 .............................. TAGAACACATTTATATATTTTACATGTACAGGTGTG 4771 30 100.0 38 .............................. TAGAATACATTGTATATTTTGCAGTGTATTCGATTAAG 4703 30 100.0 35 .............................. AGAGGGAATACGCAGATAGCGTTGTCGCTACAATT 4638 30 100.0 36 .............................. CTGTCTCGTGACTAAAATTTGGGTCAAGGATATACT 4572 30 100.0 36 .............................. AATTCTGCTGCTACTGCAAGAATAAGAAACTATCTA 4506 30 100.0 36 .............................. TAGATAAAATTGCAAAAGCTTTAAATGTATCTCCTG 4440 30 100.0 37 .............................. TATCAACATTGTAAACTGGAAAAGCTGTGGGACCGGC 4373 30 100.0 38 .............................. CCAGTTTTAAAGGCATCACCTATCAATCCTATGGCTCT 4305 30 100.0 36 .............................. AAGCTATAGAAAAAGATAGAGATGCTATGCAATCCA 4239 30 100.0 37 .............................. TTGATTTTACAGCCCTTTTTAAGAGATCATCTCTTTT 4172 30 100.0 35 .............................. CCTTTAAATTTAACTATATCATCATGTTGATCGTC 4107 30 100.0 36 .............................. TCCTATGGCGTGGTATAAGCTTGAAGATATAGCAGC 4041 30 100.0 37 .............................. CAGAAATAGAAGGAACGCCAGAGATGCGAGAAGATAT 3974 30 100.0 36 .............................. TCTAATCCTTCTTATTGCGCCATTGATTCGTCTATA 3908 30 100.0 37 .............................. TCATTTTTTGTTGACTATCTGAAAATGTAACGCCTGA 3841 30 100.0 36 .............................. ACTTGTATCGTATGGCAATAATCAGACAATGTATGT 3775 30 100.0 36 .............................. AGCAATTCAGCAAAAATGATTGTGTACCAATTCAGT 3709 30 100.0 37 .............................. TTATTTTTTGAAAACAAGAATAGAATATTAAAAATTC 3642 30 100.0 37 .............................. TAGCATCATATCTAGGTCTATATTCCTTTACTTCCTT 3575 30 100.0 37 .............................. CTGTATCCATCAGATTTATACTGGAGTCTATAATTAA 3508 30 100.0 36 .............................. CTTTTATCCGCACGGTTGAAACACGCGTATAGCTGT 3442 30 100.0 36 .............................. AAGAAGTGAGGAGGCATAAACTATGATTATATGGTA 3376 30 100.0 38 .............................. TAACGTGAAATGAAGGAAGGAGGTCATAGAATGGCTAG 3308 30 100.0 37 .............................. AAGAAGTAAAAGTAAGACAGCCTATCGAAACCAGAAG 3241 30 100.0 37 .............................. TTTGCAGAACCAAGGCCACCCACTAAAATTCCATTAG 3174 30 100.0 35 .............................. TCATTTATCTCTACGCCATAATCACTGGCAGCTAA 3109 30 100.0 37 .............................. TTTCCTTCGCATTTAGTTTAGAATTTTCATCCTTCCA 3042 30 100.0 36 .............................. TATGTCAATGCCCTTATCTGCGCATCTGTCATCTGA 2976 30 100.0 38 .............................. CTATCTGGAGATGAAATTAGCCAGTTACCGAACCTGGA 2908 30 100.0 36 .............................. GCGGCTACGAGATCATCAAAAGTTAGTTCCTGCTGT 2842 30 100.0 36 .............................. TAGAAACAGAAATATCTATAGTTTTAGCTGCGGGGC 2776 30 100.0 36 .............................. AAAATTTTAGAGATGCAAAGAAAGCAATAGACGAAG 2710 30 100.0 36 .............................. TATGGAGAAGATTAGAAAATATTTTGGTTGGCAGTT 2644 30 100.0 37 .............................. TTCCTAGTGCAGCTGTAAGCCATGCACTTACATTTCC 2577 30 100.0 37 .............................. CTCTCTGCGTAGCAGTCTGTCCTGCAGGAAGCAGAAA 2510 30 100.0 35 .............................. TCTTCTAGGAGGATTCTTTGGGGTGGCAACACAAG 2445 30 100.0 35 .............................. CTTCCTCATTCATGGTCCCAATATTGACCAAATCA 2380 30 100.0 38 .............................. AGTATAGCAATATAATTCCCTCTATCCAGATGAATTCC 2312 30 100.0 37 .............................. AAAATATTGCAGGATAGTTTCCATTCATATAAACCTT 2245 30 100.0 35 .............................. CTTCTTCTGCCCGTATTTAATTTTGATAAATAATC 2180 30 100.0 35 .............................. TACAAGGCATTGAGTCAAAGATAAATGCAGTTAAG 2115 30 100.0 37 .............................. CATAACTCCATAAGCTCTATTGAGCCCATAATATCCC 2048 30 100.0 36 .............................. CTGTACCGTCTGTGTTGTGCAGAATACTAAAGGTTG 1982 30 100.0 37 .............................. AAAATAAGTTTGGTTCTAATATGGATCTTACAGCGTA 1915 30 100.0 38 .............................. CCAATAAATTGTCTCTTTTGACTATCAACATCGAAACC 1847 30 100.0 37 .............................. ATAGACTTTCAATCCAAAATTATGCTAAGAATTCTAT 1780 30 100.0 36 .............................. TAGAAACAGAAATATCTATAGTTTTAGCTGCGGGGC 1714 30 100.0 37 .............................. TCCTAATCACCATCTTTCAATAGTTCAGGATTTTCAT 1647 30 100.0 35 .............................. TAGATGCTAAAAAGGCTATCAATGATGCAAAAAAA 1582 30 100.0 38 .............................. GTGGCATTATTATAAAATTTGACTAAAGAATGGAATTG 1514 30 100.0 36 .............................. TAAGTTTGACTTTGATAAGAACCAATTTGTAATTAA 1448 30 100.0 36 .............................. CTGACAAGTATGGTAAGCAAAGCACAGATAGAGCAA 1382 30 100.0 37 .............................. TACCTTTTGTACACCGAGAAGAGATAAAAGGATTCGC 1315 30 100.0 36 .............................. GCAGTTTCAGCGGCCCAAAAGATAGCCGCAGGGACA 1249 30 100.0 35 .............................. TATAATAAAAACGTTTGGTTTAGAAATAAAGTAAA 1184 30 100.0 37 .............................. ATGTCAATGTGCCCGTGCCTTTATACCCCATGTATCT 1117 30 100.0 37 .............................. GTAAAAAAGCAAGAAGTATAGGACTTTATGACAAAAG 1050 30 100.0 37 .............................. TAAGTTTCTGGTATGTTCCCCTGTCAAAATCCACAAT 983 30 100.0 36 .............................. TAACTTCTACCGGTTTGTCAGGGCTATATTCACTTA 917 30 100.0 36 .............................. CTATAAATTAGGTGATGGTGCTGTTGTTTGTAATGA 851 30 100.0 36 .............................. AGAGATATAAGATTTAAGGCACTATATAACGTCAAA 785 30 100.0 37 .............................. TGTGTTGCCGCATACTGGCGATACCAGTTTTCTTTCA 718 30 100.0 36 .............................. TCAGAGAAAAAAAGTTTAGAAACAATAATAGATTTA 652 30 100.0 35 .............................. TAAAGATAGCCAAAATATCAGCCTACAAAATTAAA 587 30 100.0 36 .............................. CGGAATAAGTATCATCCCGCTGACATAGATGAAATT 521 30 100.0 35 .............................. AGCTATGCCCTTTCCAGTATGCTATTCCTTATGAA 456 30 100.0 35 .............................. AGTGGACTTCTGATTATAGCGCATTTGGAAAAGAA 391 30 100.0 35 .............................. CAACATGTGTAGGTAATGTATTTTTTGTCATACTA 326 30 100.0 38 .............................. GTGCAAGAAAAGTGCAAACTTTGTGCAAGAACTGTACA 258 30 100.0 37 .............................. CTATCTGCAAGCTGACCGCATATATGCCGCTATCCAA 191 30 96.7 0 .................G............ | ========== ====== ====== ====== ============================== ====================================== ================== 76 30 100.0 36 GATTTTAGACTACCTATAAGGAATTGAAAC # Left flank : TTTTCTGAACCATGATACCCTTGGTTGAACCTTAACATGAGATGTATTTAAATCGCAGCATCCCTATGTTTGCATCTATAAGTTTATTAGTTGAACCTTAACATGAGATGTATTTAAATTTCCTGAAATTATCAACTAATCTCAATATGTTTCCACGTTGAACCTTAACATGAGATGTATTTAAATAAACTTTGGTATATTTGACAATTTAAAAGTTGTTGAGTTGAACCTTAACATGAGATGTATTTAAATATTTTCTCCCTCCTTCTTTGTAACTCTCATACAATCGGCTGAACCTTAACATAAGATTAGTTTAAAAAATATTTTGGAATTATATTAAATTTTATGCCGTCGACCATGAATAGAGTAAAAATTACCGGAGGTCGACGATTTTTATGTTTGCAGTTAATTAGCCGCCTGAGATTAATTTCTAAAACTTTTGTAGAAATATTTCTGAATATTGCATTTTTCTAGATGCTGATGTATTCTATATTTGATGG # Right flank : CTCATATATTGAGGGAATGAGTATTTTTGTAGTCATTATTACATTGCTTTTTTACAACTGTGAACTACCACCACTTATAGAAGTAGATGGCTTCTTAGTCAATATTCCTAATGGAACAAGTTTACCTAAGCTCTAAAGGTCGAACCAACCTCAGTGTATTAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTTTAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 9718-5353 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXYI02000112.1 Clostridium sp. HV4-5-A1G strain HV4-6-A5C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 9717 30 100.0 36 .............................. CCTTTCCTGCCAACCTGGTAAATGTAAGTGCCAACA 9651 30 100.0 36 .............................. CGTTTGTTCTCATTAGAATCTTTATAATTCGTTACA 9585 30 100.0 36 .............................. AAGAAAATTTTAGATATATAAGGAGGAAATAAAAAT 9519 30 100.0 34 .............................. TACTAAAGGAATTCCCAATAAACATCAAGATAAA 9455 30 100.0 35 .............................. AAATCAAATTCATATTCTTTACTTTCAGTACTTTC 9390 30 100.0 36 .............................. AAATAACTTTCAGTTATCGGCACTGGCACTGGCACT 9324 30 100.0 36 .............................. AAATTGCATACTTTTTCTTGTTGCCTCGTTATCTCC 9258 30 100.0 36 .............................. GGTAACTGCATTCGTAACATTCCCCTGGGTACTAAC 9192 30 100.0 36 .............................. TGTAAATTATATAATGAATAAAATATTTCATAAAAG 9126 30 100.0 34 .............................. TAGCAGATGAAAATAATTTATATCTGATGAAGAA 9062 30 100.0 36 .............................. GGGTTCTTCTTAATTTCCAATATTCTAAACTTCAAA 8996 30 100.0 36 .............................. TTATTCAATCTCTCTATCGTGTGGCTGCCATATCTC 8930 30 100.0 36 .............................. CCTTTGAAGTGAATTCATCCCATATTCCCATTGTCC 8864 30 100.0 36 .............................. TATTCATATTTTTGTGTCCTTGCTGCTTGCATGGTG 8798 30 100.0 36 .............................. AATTGTGCTGAACCTCTATATTGTCTAAATAAGTCC 8732 30 100.0 36 .............................. GTAATCCTACAGCAGCACCCAATATCTCTCCCCACC 8666 30 100.0 36 .............................. GAAAAATAATTTAAAGGAGATTTAAGCATGAATACA 8600 30 100.0 35 .............................. ATACCGAAGTTGGAGAAGGCCTGGCCATTGCGGCA 8535 30 100.0 36 .............................. ACAAACAAAAGCTGGCAATTCTGAAACAGTTGGAGC 8469 30 100.0 34 .............................. CTGCCGGGGCTCATTTAGTCGGTTGGTCTATTCA 8405 30 100.0 36 .............................. TTGCTATCGTTGTGATATTTTTGGTATTTGACTATT 8339 30 100.0 36 .............................. AAAAAGACAAGGGAATTGAAGATGAAGGAGTACGCA 8273 30 100.0 36 .............................. GTGGTCCAGTTCCCGTTCATGGCGGAAATAAATCCA 8207 30 100.0 36 .............................. CTAAACCATATACATAATCAGTCCATAAGCTGTTTT 8141 30 100.0 36 .............................. TGAGGTTCCTTATTTCAAAATGGCACAATGATTTAA 8075 30 100.0 36 .............................. TTTACATAAAAGTCTACTCTTATTCTCATAAAGTCC 8009 30 100.0 36 .............................. GTAGAATCACTTTCCTTCACAGCGTCTTCTACAGCT 7943 30 100.0 36 .............................. CCAAATGGCAAAAATCCAAAAAGGTAATAAAAGAGC 7877 30 100.0 36 .............................. GGCTGTAAGTTTTACCAACCAATTTATAAACTATGT 7811 30 100.0 36 .............................. TTCTCTTTTAATAGTTCTTTTATTTTCATATTATAA 7745 30 100.0 35 .............................. ATGTCTATGGTCAATATCCCAAACAAGGCATCTGC 7680 30 100.0 36 .............................. TCTTTAATTTTACTGTTATCAATGGTTTCATCTGTG 7614 30 100.0 36 .............................. TCCTCATCATCACTTATAACATTTTCCGTAGTCAGT 7548 30 100.0 36 .............................. ACGCTAAAAGTACAGGGGAAATATCTTTGAATGTAG 7482 30 100.0 35 .............................. TGTTTTATATAACCTCCTCTATATCCTTTGAATTT 7417 30 100.0 36 .............................. TATTGCTTTCCCTCCCAACTCTTTTTTCTGCTGTAG 7351 30 100.0 36 .............................. CGATATATTGGGTAAGGAGATGATATTATGAAAAAG 7285 30 100.0 36 .............................. CCTATTTAATTATACTAAAAAAGAGCACCTTAAGTA 7219 30 100.0 34 .............................. TAGTTGAACATAGGATAATTATTCCCATATTCGC 7155 30 100.0 35 .............................. GCACTAAACCTTTTATATCTTCTATGTTTATAGGT 7090 30 100.0 36 .............................. AGCACAGCCGACAACAATTAATTTAAATATGCAGCT 7024 30 100.0 36 .............................. GAAGTATACATTAGCACTATCTCTATTGTCCTTAGC 6958 30 100.0 36 .............................. TACATATGATACCATCTCCTTTACCCGATATATCGT 6892 30 100.0 35 .............................. GATACAATTTCTACGGAAAGATTAGTTGTACCATT 6827 30 100.0 36 .............................. ATAACGACAATACGAGCACCGTATGGTGAAAATGAG 6761 30 100.0 35 .............................. TAACTACAACTTTTAGAAGAAGCAAATTTGAGTTT 6696 30 100.0 35 .............................. GTATAAAATACTTCTGTTGTAGTTTTGCCTTGCTT 6631 30 100.0 34 .............................. ATCGCCACTTCTGGGCTTGTTTTAAGGCTTCATG 6567 30 100.0 34 .............................. TTTATCAGTATCAGTTTTCCAGCATCTACATCAG 6503 30 100.0 36 .............................. ATACAAACGGTACACTTCCAGAAAAGATGGAAGAAA 6437 30 100.0 34 .............................. GTATAAATGTGAAAAAGAAAAGGAGGAATTATAA 6373 30 100.0 36 .............................. AAAGTGTTAAAGATGATATAGACCAAAGATGCTTTT 6307 30 100.0 36 .............................. TTTTCTATATTACTTTCAAATGTCCAACCTGTGCCC 6241 30 100.0 35 .............................. TCATCTTTTACTATTACGGCACCATATTTCCTGCG 6176 30 100.0 35 .............................. TACCAGGATAATTCTTTATTACAGTTTATAACCTT 6111 30 100.0 36 .............................. GCCTAAAGGTAAAACAGCCATATATGGGCTGTATAT 6045 30 100.0 36 .............................. GGTTCTCTTTTATGCTGTCCTTCTATAAGAGTATTC 5979 30 100.0 35 .............................. TTGTCAGACCAATTGTAAGCGAAATTCCTTGGCAA 5914 30 100.0 36 .............................. ATAGCACTTCTAAATAGCTCCTTATCTTCTTCCTTC 5848 30 100.0 36 .............................. TTATCTACCTGTAGGAAGTTTCAAAGGGCAGAAAAG 5782 30 100.0 36 .............................. TATTTTGCCCTGTATTCTATGCTGTAGTTAAAGCCT 5716 30 100.0 38 .............................. AGTATATAGCCACTTTTTTCTGAACCATGATACCCTTG 5648 30 100.0 36 .............................. CGCAGCATCCCTATGTTTGCATCTATAAGTTTATTA 5582 30 100.0 37 .............................. TTCCTGAAATTATCAACTAATCTCAATATGTTTCCAC 5515 30 100.0 36 .............................. AAACTTTGGTATATTTGACAATTTAAAAGTTGTTGA 5449 30 100.0 37 .............................. ATTTTCTCCCTCCTTCTTTGTAACTCTCATACAATCG 5382 29 86.7 0 .C.............A....-........A | G [5359] ========== ====== ====== ====== ============================== ====================================== ================== 67 30 99.8 36 GTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : TTCCATCAAATTTATTTAATTTTTCATAGGCAGTTAAAAAAGTCTGCTGAGCTATATCTTCTGCATCAAAATAATTTTTTGTAAAAGAAAAACAGATGGTAATGACTAGACCTTCATATTGTTTAATATATTTTTCAAATTGATTTTCTTGAATAATCATCACCGCCTTTTTTAGCCTTACAATAATACAACGATTTATAAATAAAAAACACTTCAACAATTCAATTTTAACGTAAAATATTTTTGATAATCTATAATTTTTATAATACCCATTTTATAATTCAAGTACAAATTATAATCTTCATTTGATTAGACATCTTCTGTTTTCCAACCTACAAATAATAAGAAATTATTGCTAGCCCTTAGATTACAACGCCTCCATAAATCTTGTACTATTTATTTGTCTATAATAAAAATCGACTGGAAAAGTTTCGTTAAAATCCTTTATTTATAGTACTTCAAAGGATATAATAGAAATGTAAAATGACTATTTTACACAG # Right flank : AATATTTTGGAATTATATTAAATTTTATGCCGTCGACCATGAATAGAGTAAAAATTACCGGAGGTCGACGATTTTTATGTTTGCAGTTAATTAGCCGCCTGAGATTAATTTCTAAAACTTTTGTAGAAATATTTCTGAATATTGCATTTTTCTAGATGCTGATGTATTCTATATTTGATGGGATTTTAGACTACCTATAAGGAATTGAAACCTTTTTATAGGAGTTGTAATATGCTGGTTTATATTAGGATTTTAGACTACCTATAAGGAATTGAAACGCACTTGCAAATGCACAAATGAATTTAGATAAAGCTTGATTTTAGACTACCTATAAGGAATTGAAACTTGCCTTTTTTAATTCCATACATTACAGAGCCAGCCGATTTTAGACTACCTATAAGGAATTGAAACGCTTTTCCCCTGCCCCTATTTTGAGGTGGGGATATTTGATTTTAGACTACCTATAAGGAATTGAAACACCCTTGAGGAACAGAATAAAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 8987-10719 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXYI02000020.1 Clostridium sp. HV4-5-A1G strain HV4-6-A5C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 8987 29 100.0 38 ............................. TAATATACTCATCACCTTCTATATTAGAGTATATTTTA 9054 29 100.0 35 ............................. CACATTTCTATATAATACTCTATCCCTACATCTGG 9118 29 100.0 38 ............................. CTCTGTGCTCCGCTGTTTCCTATACCTGCTGCCAGTTC 9185 29 100.0 38 ............................. TTGAATATCAGCCTTACCATTACTTCTGTATTTAGCTG 9252 29 100.0 35 ............................. CCCTTAGCCTAGAAAATCAATTACATCAAGTTTCA 9316 29 100.0 34 ............................. CAGAAAAACAAGCAGGAAAACTGATTAATATCCA 9379 29 100.0 37 ............................. ATCCATCTGGCAGTGCTATGACTCCCTTGTCGTCCCT 9445 29 100.0 37 ............................. ATTGATGGGGTATCTAAAACATTTGTGGCTAAATTAA 9511 29 100.0 37 ............................. AAGGCTATTTGTAATGGAACATAGAAGCTACTTCCCT 9577 29 100.0 36 ............................. TTGAAAATCAAGAGTTGAATGACAGGCAAAAATTAT 9642 29 100.0 36 ............................. TTAGCCTTTGTACTATATCAATTTGAAGGGGACAAA 9707 29 100.0 36 ............................. TATTAAAAGATTCAAGTAAGGTAGATGGGACACTTG 9772 29 100.0 37 ............................. TGCAATAAATCTTTTGTTATACGTAAAATCAAATTCG 9838 29 100.0 35 ............................. TTAAGAGGCTTGCAGGCTCATTATGTGGCAAGATT 9902 29 100.0 37 ............................. TTATATCGTCTTGTATCATATCCTCTGCTTCTACTAT 9968 29 100.0 36 ............................. TTTTGCTAGAAAGGAGTTTTAAATGTTCGCGGAAAG 10033 29 100.0 36 ............................. TAAATACTGATATCTTTCTGCAAAGAGTAAGCTTTA 10098 29 100.0 36 ............................. CATTTTCCATAGCCACCCATGATTCTTTTGTTCCTT 10163 29 100.0 37 ............................. TTTGAAGAGAGTTATAAAAAGGTAAGATGCAGATACA 10229 29 100.0 35 ............................. ATATATATGGTATCGTGTTAAGAGAAACTTCTGTT 10293 29 100.0 38 ............................. GGCTATCCAGATAAGTATTAGTTACTATGGTTGCGGGT 10360 29 100.0 38 ............................. TTCCTTGTGCCTAACTCATTAGGCTTGTTGCCGTGGCG 10427 29 93.1 39 A...............G............ TTTGGCCGGGGGGTGTAAAAATTTTGAAAAATAATTTTG 10495 29 93.1 36 A...............G............ TTGTTATAACCACATGCATACACAGTATTGTCATTG 10560 29 93.1 36 A...............G............ GTAAATGTAAGAAGTAAATTCTCTGCAGCAATTGTG 10625 29 93.1 37 A...............G............ TCCGAGTAATAGCCTTTAGACTGCCCTTTAAACCTAG 10691 29 75.9 0 A.......T.......G....G.A.T..T | ========== ====== ====== ====== ============================= ======================================= ================== 27 29 98.1 37 GTTTTAGAATACCTATAAGGAATTGAAAC # Left flank : CCGTATAGTGGTTTTGTTGCGAGGTGGTAATTGGTGTTTGTAATACTTGTCTATGATTTTGGAGAAAAACGTGTCGGCCGTGCTCTTAAAACATGTAGAAAATATTTAACCTGGGTTCAAAATTCTGTTTTTGAAGGAGACATAAGCATGGCTAATTTAAAGAAATTAAAGTGCCAGCTTTCTGATATCATGGTAAACAGTGAGGATTCAGTGATAATATATACCTTTAAAAGTACCAGATATTCTAATAGGGAAGTTCTTGGAGTGTCGAAAAATCAACAGGATATATTTTTATGAAATGGCCTGTTTAATTTTCAAAAACATTTTAGGATTATCTTAATTTTTTTGTCGTCGACCCTGAATAGAGTAAAAATTACCGAGGGTCGACAATTTTTATGCCTGCAGTTAATTGGCGGGTTAAGATTGATTTTTGAAACTATTGTAGAAATTTTCCTGGATATTGCAATTTTGGACAAGCTGATGTATTCTTTATTTGATGG # Right flank : TATCAAAAATACTTTTTTCTAGAAGTGTTGATATTACTTGCATTGTGGGCATGTCGGAATCTTGCATATGCCCGGCTGGTGACAAATTGGGGACAAAATTATTTACCTTCAAATATGTCCTTGAACTGGTCGAATTCCTGAACAACTTTGTTTTCCATTTTCTTCGTAACACGCAGATACGTGTCTTCTGTAACTTTTTCGGTTGAGTGTCCAAGTCTTTCCTGGATAGATTTTACGGTGGCACCATGTTCCAGGAGATACGTAGCACTTGTATGACGCAGGCCATGGAGTTTTACGTGGCGTATCTTATTCTTTTAAAAAAAATTCCCCACCCAGAGTAGGGCAGGGAATACATTAGATGTTTAGCTTCTGCTTTATTGCTTCCTGTAGTAACTGGGAAAAATTAATTTTATTTTCCTCAGCTTTATACTTTAGCCACTGCGGCATTGTCACGTTGGTGTTTACAGTTTTGTTGTTCATCTGAGCCCTCGCAAGCTTCA # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAATACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 12911-13727 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXYI02000020.1 Clostridium sp. HV4-5-A1G strain HV4-6-A5C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 12911 29 100.0 38 ............................. ATAATAAAAAAAATGACCTTAACAGGTCTTAAAAGGAG 12978 29 100.0 36 ............................. CAAGAACTATAGCAGAGAGCTTCAATATGTCGCATG 13043 29 100.0 37 ............................. TTATGCTTGCGCAGCTATTATAGGTTCTGAACATCTA 13109 29 100.0 37 ............................. CTATATTCAAGTATCCCATCAAGAGTTATATAACTGG 13175 29 100.0 37 ............................. CTCGTGGCAATATCAAATCAATGCTGCAGTAGGAAAT 13241 29 100.0 36 ............................. TAAAATTCAGTTTTTTACATATTGTTCGGGTTTATA 13306 29 100.0 37 ............................. GTTTAACAAAGTTATACCAATGACTTCCCATGTTAGG 13372 29 100.0 37 ............................. TCAAAAAGGCAAAATTAAAAATCGTTAGTTCCAGTAT 13438 29 100.0 36 ............................. CTTATAACCAGTTTAATACTGTAAGGTATAATTTTA 13503 29 100.0 35 ............................. TTGCAAATTAATTATTGCTCTGATATGTCATGACA 13567 29 100.0 37 ............................. ATATAATCCCCTTTCAATACTTAACCCTATTTATTCA 13633 29 100.0 35 ............................. CTAATTGTATAGGCGAGTATTAGCAATATAATACC 13697 29 93.1 0 ........................T...A | TG [13719] ========== ====== ====== ====== ============================= ====================================== ================== 13 29 99.5 37 ATTTTAGATTACCTATAAGGAATTGAAAC # Left flank : ATGGTTTTTTTTATATTTTTATGTAATTATCATGAAAAATATTGTAAATTTGGTTTCCAACCTAATTTATAAATGAAGACAGCAAAAACTGTTAATTCACAATGTATTATGATGCCTTTCTATATTTATTTCAGAAAACTAAAAATACCTGGAAAATTTTTAAAGGAACTCTTTATTTATGCGACTTTAAAGCATATAATAAAAAATGGCTGTTTTACATTGCTGAACCTTAACATAAGATGTATTTAAATCCTGCACCTGAGGATTTTGATTTTAAAGTGCAGAATGCTGAACCTCGACATGAGAGATTAGTTAAAAAATGTTTTAGAACTGTATTAAATTTTATGTTGTCGACCCTGAATAGAGTAAAAATTATCAGAGGTCGACGATTTTTACGTCTGCAGTTAATTAGCGGCCTGAGATTAGTTTTTTGAAATTCTTCTAAAGATTTTCCTGAATATTGCAATTTTGGACAAGCTGATGTATGCTTTATTTAATGG # Right flank : ATTAAAAGAAAGTTTGACCAAATTACCATGAAAATAATTAACAAATTACGAATAAAAATGACTGTTTTACATTGGCTGAACATTAACATGAGATGTATAATAAATCATGCTATTTCTAATATTATGAATAAATGTAAAAATAAATATGATATAATTAATTCATAGCTAATGTCTAAAATATGTTTTGAGTAAGGATGGATTTTGTCATGAATAGAGTTGAATTGTTAAATATAATTGAAAATGGAGAAAATTCATATATAGAATTTAAAGAGGAAGGCATAAAGGCGAAAGAATTGGCGGAAGAAATTGTAGCTTTTGCTAATAGTGAAGGCGGGACAATATTAATAGGTGTATCTGATGACGGTAAAATAAAGGGAATAACTGATAAAAACATAGAAGAGAAAATTATGAATGTGTGCAGAAATAATTGCATACCTAATATAATTCCTGTTTATGAGAGTGTGGAATTAGATGGATTAAGGATATCAGTAGTTAATATT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTAGATTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 3 24725-25343 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXYI02000020.1 Clostridium sp. HV4-5-A1G strain HV4-6-A5C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 24725 30 100.0 36 .............................. TTTATTATTCCTTCCATATTTATACACCTCATTTAT 24791 30 100.0 36 .............................. AGTTTTTTTGCCAGTTTGTTAAGTTCATTCAAATTC 24857 30 100.0 36 .............................. AAGTTGCTACAATTAATGCTAATAAGGATAGAGCCA 24923 30 100.0 34 .............................. GTGACTTTATCTGGCTATTCTGCTAGTGAATTAG 24987 30 100.0 35 .............................. ACTTCAACATACACAGTTTTCATATTAGGATCTGG 25052 30 100.0 36 .............................. CTTATATTGGAAGGTTAATTATTAGCTGGCTTTGTT 25118 30 100.0 36 .............................. CAAAGAGGTCATTGCGGTAATAGACAGCAGGGGAGG 25184 30 96.7 35 .....................C........ GAAGTTGGACCTGACCCTGTTCCAGCGTTAGAACT 25249 30 100.0 36 .............................. TAAAGAAGTTCTTGTTCTGGTACGGGGTATTCCTCC 25315 29 96.7 0 .......................-...... | ========== ====== ====== ====== ============================== ==================================== ================== 10 30 99.3 36 GTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : ATATATATTACATTTCAGATGGTGAAAAATATATAAAAGACGGCAAGTTCAACCAGGAGATATTCATTGGACAAACTCCTGATGAGGCAAATTTGTTTATATAATTACGGGGTGATTCAGCATGAAAATAAACGGTACGCTCATAAATTATTATTTTCACTGCAAGAGGCAGTGCTGGCTTCATGGAAGCAGAATCAATATGGAGGACAATAGTGAGGATGTTCACATAGGAAAGATAATTCATGAATTAAAATCCGAAGGAAAAAAGAATTCGGAAATATCCATAGACAATGTGAAAATAGATAAAATCACAAAAGATTATCTGGTAGAGATAAAAAAATCTGATGCAGATATAGAAGCTGTGAAATGGCAGGTGTTGTTCTATCTCAGCTTGTTGAAAAGCAAGGGAATTAATAGAGAGGGAAAAATTGAATTTCAGGAAAAAAATAAGGATGTATTTAAATTTGAAAATCTTGCTTTTTTAAGGCATTTAGGTTTTC # Right flank : TAATAATTGATAGTACAGAAAATCCGGGATTACCAATCCATTTATACGACCCTTGTTTAGGATAACTGTAGTAGTATTTGTCACAGTTATAGCATCAAAATTGAATATGAATTGTACTGTAGTTTCAGTTGTGGGGATATCGTTAGTAATATTATATAATCTAGTAAGGTTTTGTTGTAAATGGAAAGAAAATCAAGTCGGAATAATGTACTAAAATAATTAGCTAAGAAATATTAGTAATCCATAACTGGTTGGCATACCATCAAAAAATAGTAACCCATTGCATTTAAGCATACTAGTAGAATAAAGTAAACCAGAATTAATGAGTGTGTTATGGATGGAAAGTAATCAAAGCTGTATAGTATTACTTGGCAGAATAATAATCTAAACTTCTAGTATCAAGTAAAGGATTTGTTGTGAATGGCAATCGGAGAAATAAGTTTATTAAGATGACATCAGAAGAGTTTAATACTTGCGTAGGGTTTGCCCTGCACAATGGA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 21224-23486 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXYI02000008.1 Clostridium sp. HV4-5-A1G strain HV4-6-A5C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 21224 30 100.0 37 .............................. TATTTTCAACCCCTTTGGCATATGTCTTATTTCCCTG 21291 30 100.0 36 .............................. GATGATCGAGATCAGAAGCCTAGCAATGAAGAACCT 21357 30 100.0 36 .............................. AAAGAATAAGGACTCGAAAAAATATATCTACGTATG 21423 30 100.0 36 .............................. TAGTTTCATAGTCAAGCCCTACAGCTCCGCGAGCGT 21489 30 100.0 36 .............................. GACAATGGCTTAACTATAAGCGAGGCGAATTTGATT 21555 30 100.0 36 .............................. GGCTTTTATGATGGATGATAAAGTCGGAGATGAGGA 21621 30 100.0 35 .............................. GTAACGAATACAGTTTTATCCCATGCAGGGGGCTT 21686 30 100.0 37 .............................. CCGACGCCGAACTTATGGATGATACTCTGGATGTTAT 21753 30 100.0 34 .............................. GTTTGTCTGCTGTTCGCTTGGCTTCCTCAAGCAG 21817 30 100.0 37 .............................. ATGTGGATTGTGCCATATTGGCTTCCTTACATAACCT 21884 30 100.0 34 .............................. TTTAATTCGTGCCGTTCCCCACCATAGGCGGATT 21948 30 100.0 36 .............................. GGTATGCCAGATAGGATTGTTTTAATGCCACACGGT 22014 30 100.0 34 .............................. TTAATATAACGAACTTCAAATTCTACACCTTAAT 22078 30 100.0 36 .............................. GGTATGACAGATAGGATTGTTTTAATGCCACACGGT 22144 30 100.0 34 .............................. TTATTATCCCGAACTTCAAATTCTACTCCTTTAT 22208 30 100.0 35 .............................. AGGGATTTAATGGACTTTGACTGGTATTTTTATTT 22273 30 100.0 36 .............................. TGCTCAGGTAGATTTCTGATCCTGCCACCGTTAACT 22339 30 100.0 34 .............................. CCCCATTCCAATTCCAAACAATCTTCCAGGTCAG 22403 30 100.0 36 .............................. TAGGGTATAAATTTCATGCTATCACCTTCCTTCACT 22469 30 100.0 37 .............................. TGCTTAGTCTTAATCCTTTTCCACTCTTTCCAAAAGC 22536 30 100.0 38 .............................. GGGCAATATCGTTGACCTGCATTTATAATCTTCCCACA 22604 30 100.0 37 .............................. TAACCATTCAACTCCTTATATACATCCTTGTGTGGTC 22671 30 100.0 36 .............................. CAAGTTCTTCAGCTCTCCCCAGAATGTCAGCAATAT 22737 30 100.0 37 .............................. AGCTGTTAGGTGCTGGTGTTCCTGTAAGTCCCACTAT 22804 30 100.0 36 .............................. TATAGACCTGTTGAGAATTTACCTCCAGCATACCAG 22870 30 100.0 37 .............................. AGACTAGAACCAACGCCATCAATTACAGTTGCCAAAT 22937 30 100.0 35 .............................. AATACAAGGGCAAGACTGAGAGAATGGCGACATAC 23002 30 100.0 35 .............................. AATTATTAAGTGTTTGAGATGGTTTTTGACTTAAG 23067 30 100.0 35 .............................. TAACTATACACCTGCCTTTGCTCCTTCTCCTTCTT 23132 30 100.0 36 .............................. GAGCGTTACAACAAATTGCCCAGCGAAATAGCGAGG 23198 30 100.0 35 .............................. TCCCTCCTAGGCTTCTTTCTGCATTAGATATCTTT 23263 30 100.0 35 .............................. TAGCAAGTATCTTGGGGTCATTCCTGGCATTATAA 23328 30 100.0 35 .............................. TGTTCTTTATCAAATTTTTCTTCATGCCCATTATT 23393 30 96.7 34 ......T....................... CTGGGATTTCGACATATTCCCCGTCGCCCTTCTT 23457 29 93.3 0 ....................-........A | G [23480] ========== ====== ====== ====== ============================== ====================================== ================== 35 30 99.7 36 GTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : GTGAAACGGGTTGATGTAAAAGATGCTTATAAAATTATAAAAATATTGGATCCAGGCTTATCAAATGTGATTTTCCAATGTCAATGAGGATATTTTGACCCAGAGTCTGAGATTACACTCCACAGCATAAGTAAGGAAAACAGGAACCGTAGAAACTATAGGGATAACTTGGAAAATAAGAGAAACTAGAAACTACTGTTGGTAAAAAAATATTCCGTGGAGTCTGCTCTCTTTCCAGGAAACTCCAACTTCAAGCTTGAAGTACCTCTGGATGCAGCTAAGTGGTGATTAGTTTACTATAAGTAAACCACTTGTTGCAAAATGATTTCCAACCAAATTAAACTCTAAAAGTGTTTCAATGTTTTGAAATGGAATGGATTGAGATACCTGTTTTTATTTCTCTTAAAAAAATAAAAACAGCTGGAAAACTTTCGCCGAAATGCTTTATTTATGCGACTTTAAGTCCTATAATAAAAATAAAGAATGGCTATTTTACGTTA # Right flank : AAATGTTTTAGAATTATATTAAATTTTTATCGTCGACCCTGAATAGAGTAAAAGTTACCGGAGGTCGACGATTTTTATATTTGTAGTTAATTAGCCGCCTGAGATTAATTTTTAAAACTTTTGTAGGAATATTTCTGAATATTGCATTTTTCTAGATGCTGATGTATTCTATACTTGATGGGATTTTAGGATACCTATAAGGAATTGAAACTATAAAAAAGCCTCCTGACTTGGAACCTCATTATAGATTTTAGGATACCTATAAGGAATTGAAACTCATATTCTATAGAAGTTTCTTCTGACGGTGTAACATGATTTTAGGATACCTATAAGGAATTGAAACACATCTAATCCCATGTGATCTGCAAGCCAGTAGAAACGATTTTAGGATACCTATAAGGAATTGAAACCCTTTCCTGTTCAGTGGGAACCCTTGCTTGCTTTTTGATTTTAGGATACCTATAAGGAATTGAAACTCCTTCCTAAGTCCCCAAACTTGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 23667-26691 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXYI02000008.1 Clostridium sp. HV4-5-A1G strain HV4-6-A5C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 23667 30 100.0 35 .............................. TATAAAAAAGCCTCCTGACTTGGAACCTCATTATA 23732 30 100.0 37 .............................. TCATATTCTATAGAAGTTTCTTCTGACGGTGTAACAT 23799 30 100.0 37 .............................. ACATCTAATCCCATGTGATCTGCAAGCCAGTAGAAAC 23866 30 100.0 36 .............................. CCTTTCCTGTTCAGTGGGAACCCTTGCTTGCTTTTT 23932 30 100.0 39 .............................. TCCTTCCTAAGTCCCCAAACTTGTACAAAATCCAATGTG 24001 30 100.0 38 .............................. CCTTTTTCATCAAAATTCCTCCTTAATTGGTTATTTTA 24069 30 100.0 36 .............................. TGGAGCACAGAGCAGATGACTTGAAAAACTATATTT 24135 30 100.0 37 .............................. AGATAAATCCTCAAAAGGAAGTGTAAATAATGTTTTT 24202 30 100.0 35 .............................. AATCATGTTGTGAATTTATAAAACGGCATCTATAA 24267 30 100.0 38 .............................. TTGGGTTGGGATAAGGAAGAATAAAAATTTCATGAAAG 24335 30 100.0 38 .............................. GAATAAAGGTTTAACTAAAAAACCATTGCCGAGTGTTG 24403 30 100.0 36 .............................. TATAACACTCTGCACATAATAGAGGTTCATATCTCT 24469 30 100.0 38 .............................. TTCTTCTGGCATGGTGAAATACTTCTGGTCCATGCTTG 24537 30 100.0 36 .............................. ATTTCCCCTGTAACAGCCCTGTGTTAATATTACTTG 24603 30 100.0 36 .............................. GCGCGAATATGATGGTTACAGGCGGAATACCAGACA 24669 30 100.0 37 .............................. ATTCTATTTTCTTGTGAAGAAGTTTAAAAGCTGGTCT 24736 30 100.0 37 .............................. ATAAATCCAAATATAGTAACAGGAATAACCTCTGTAC 24803 30 100.0 37 .............................. TAGGGTGCGGCTAGAAAGGAGAAATAACGTACTGTAC 24870 30 100.0 37 .............................. TCGGTTCTTTGACGCTTACGCCGTATGTTAGATATCC 24937 30 100.0 36 .............................. TTTTCCACTAAACTTACATAACTATCCGATTTATTT 25003 30 100.0 34 .............................. GCATACTCAATCTCTACTTCTCCCCTGTGGTGAA 25067 30 100.0 38 .............................. ATGTTAGGGTTATCTGGTTGTGGAGACAGTGAAGAAAA 25135 30 100.0 35 .............................. CCTTGATACCTAATGGAACTATAGGAACTACTGTA 25200 30 100.0 39 .............................. TTCCCGAAGTTTTAGCTGTGGTAGATGGTGGAGAATTAG 25269 30 100.0 36 .............................. ATGAAAAAATAGCAAGCATAAAAGCGAAAATGGCCG 25335 30 100.0 38 .............................. CTGCTAATAAATACTGGGTTGCGTTACGCCGAAGGTTT 25403 30 100.0 38 .............................. TTCCAACGGAGGGGAATAGGTTCATTGTGGCAGATTTT 25471 30 100.0 38 .............................. TCATTTCGCGCAGATATATCAGAAATTAAAACATCAAT 25539 30 100.0 36 .............................. CTGCCAAATCCTGTATTTGTGCAGTTTCTACTTGTA 25605 30 100.0 37 .............................. GCTATTGGATTATATATATTGTCCAGCCCGGGCAGGT 25672 30 100.0 35 .............................. ATGTTGTTCCACTACCTGCAACAGGGTCTATAACT 25737 30 100.0 37 .............................. TTGTATCTAATGAAGGATTAATTGCCTCTCCATTTTT 25804 30 100.0 35 .............................. AACCTAATAATTCATCAGGAGTAACTTCCAGTGCT 25869 30 100.0 38 .............................. AACATTGCTGCGTAGTAGCTGTGACATTTCCTGTAGTC 25937 30 100.0 36 .............................. CTGGTAGCGCTCCCGCAAATTCCGATTCTATAGTTC 26003 30 100.0 37 .............................. TGCCATGCTCTATCCTTATCCAGCCGTTCAATAATCC 26070 30 100.0 35 .............................. TGAATTAAATCATCATATTGTCCTTTTAACCTCTT 26135 30 100.0 37 .............................. AACATTCTTTTACTCTGTTGCCACTGCTACTTAAATT 26202 30 100.0 36 .............................. ACCCCTAAAAAGAAACATGGTAAGGTAATTTGCATA 26268 30 100.0 36 .............................. CTGCTTTTGCCCTTTCTATTTCTTTCTGTAGCTTTT 26334 30 100.0 36 .............................. CTCAAGTTTCCACCACTGTCAGTAGTACCACCAAAA 26400 30 100.0 36 .............................. TTGAATATTTTGGTGGTACTGTGGTGCATTTAAGTT 26466 30 100.0 36 .............................. ACATCTTCCATCTTGAATATGTGTTCAATCATCTTT 26532 30 96.7 35 .................G............ GCAGATAATTCAGGGTGTTTTTCAACTTGATTGAT 26597 30 96.7 35 .................G............ AGTAATGTTGGTCCACCTTCCCAGTATGTTGTACC 26662 30 83.3 0 C.......AT.......T..........C. | ========== ====== ====== ====== ============================== ======================================= ================== 46 30 99.5 37 GATTTTAGGATACCTATAAGGAATTGAAAC # Left flank : TTACAACAAATTGCCCAGCGAAATAGCGAGGGTTGAACCTTAACATGAGATGTATTTAAATTCCCTCCTAGGCTTCTTTCTGCATTAGATATCTTTGTTGAACCTTAACATGAGATGTATTTAAATTAGCAAGTATCTTGGGGTCATTCCTGGCATTATAAGTTGAACCTTAACATGAGATGTATTTAAATTGTTCTTTATCAAATTTTTCTTCATGCCCATTATTGTTGAATCTTAACATGAGATGTATTTAAATCTGGGATTTCGACATATTCCCCGTCGCCCTTCTTGTTGAACCTTAACATGAGATTAGTTTAAAAAATGTTTTAGAATTATATTAAATTTTTATCGTCGACCCTGAATAGAGTAAAAGTTACCGGAGGTCGACGATTTTTATATTTGTAGTTAATTAGCCGCCTGAGATTAATTTTTAAAACTTTTGTAGGAATATTTCTGAATATTGCATTTTTCTAGATGCTGATGTATTCTATACTTGATGG # Right flank : CCCAAATTACTAAAGTACAACAACTTGCAACATTGCGGATTTGGCCTATATTCGAATTGATGAACATATATGAGTTAGCTATAATAATCATATGGAGGAAATAAGAAATGTCAGGTAATGGTAAGAAGTATAATACAGAATTCAGAGCAGATGCTGTAAGGCTTGTAGTAGAAGAAGGTAGATTTGTAAACAGTGTGTCAAATGATTTAGGCATAAATGAGCAAACCTTGAAAAACTGGTTCAGACTCTTGGTTTTCAGCAGCACAAAATTTTGGAGTAAATGCTAGGGAGCTAATAGAGATATGTACATGGGCGCAAAATTCTGATATGTCGTATGTTTCGAATACTAGGAATTTTAGATTGCAATTAGATATAAGCTATTATAATAATTATACGACTGTTATGTTAGATTAGGAGAAACTAAAATGTATAAATTTCAATACAAAGATGGTGCTGAAAAGCAAAACATAATTGACCAAAACAAAGATAAAATATTAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTTTAGGATACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.40,-1.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 3 32965-35790 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXYI02000008.1 Clostridium sp. HV4-5-A1G strain HV4-6-A5C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 32965 30 100.0 37 .............................. TCCATCACTTTGTAATCAGATTTTAGTTCCTCTCCTA 33032 30 100.0 36 .............................. CTGGATCTTCTTTCCTCATAGTGGTTATTGCAACTC 33098 30 100.0 38 .............................. ACAGTTTTGTTCAGAAATACGAATAAGGCATATTTACA 33166 30 100.0 35 .............................. CTAATTTATGATTATGTTGCATATTCTTCACTTGT 33231 30 100.0 36 .............................. ACAGGTTGGAAGAAATAGAGTATTGTAGTGAAAAAA 33297 30 100.0 38 .............................. ATCTGACTATTACCGATCATTGTTTTTAAATCGTCTTT 33365 30 100.0 35 .............................. TTAAATATAAAATAGTAAATGATACTGCATATCTT 33430 30 100.0 37 .............................. TGATGTAGAAGAATTAAATCAAAAATCAAAGGAGTGT 33497 30 100.0 37 .............................. CTTCAAGAAAAACGAAATGATTCTGACCAGCAATGGC 33564 30 100.0 37 .............................. ACGTTTATAAAGGGAATTAATAATGCCCCAAAAGCTT 33631 30 100.0 37 .............................. TACAAAAACCATTTTTCTTTTTTTCTATTCTTGTAGT 33698 30 100.0 35 .............................. ACAAGTTTGTTCCATAATTCAATTATGTCCGGACA 33763 30 100.0 37 .............................. AAATTCATCCTGTTTTCTAAAATTGGTATAGCCCATG 33830 30 100.0 37 .............................. ATCTATTTTTAATTCTTCTATGTCTCTGATATATTCT 33897 30 100.0 38 .............................. TTTCAAAATGGCACAATGATTTAAGCGCTAACCTCATG 33965 30 100.0 37 .............................. AAGGAAACACCAAAGGGAAGGCGCAAAATGCCCAGGG 34032 30 100.0 37 .............................. TTTTTATAAGATTTAAATTTAGGATGCTTATCTAAAT 34099 30 100.0 36 .............................. TTTGCTTACCAAATTTTATTTTCTTTGCATCTTTTA 34165 30 100.0 38 .............................. TTAAAAAGGCAAAAATATATCGCCTCGCCCTTACCGCC 34233 30 100.0 36 .............................. ATCTCTATTATCTGACAATTCATAGTCAGCCCCCAC 34299 30 100.0 37 .............................. TCTGCATCATACAATACTTCACCTAAGTTGCCTTTCT 34366 30 100.0 36 .............................. TTAAATACATCTTGATATGTTTGTACTTTGCTCTTT 34432 30 100.0 38 .............................. CCTCCTTCTTTTCGTATTTAACATAAGCCTATTAGATA 34500 30 100.0 37 .............................. ATAAAAAGGAGTGTATTATTGTGAAAAATGAAAAAAG 34567 30 100.0 39 .............................. TACTTTATGTTTATATATTGTCTTACCTTTCTCCATTCA 34636 30 100.0 33 .............................. CTAATAGCCTTATATTGGGAACGTATATAGCCC 34699 30 100.0 36 .............................. TTAAAATCTTTACAAAGTGAGATATAATAATATTAG 34765 30 100.0 36 .............................. CCATTTGGCAATAATTTCATATGTTCTTCCATATCT 34831 30 100.0 36 .............................. TTATTTTATTAATACACTAACTATAGAACTGCTGCG 34897 30 100.0 36 .............................. ATGGTTGCCCTGTAATTGCGAGTGCCGCAGACAACC 34963 30 100.0 36 .............................. TTTTTATAACGTGAAAATAGCAGTATTTTGATGGGA 35029 30 100.0 36 .............................. TAAAACTATCTCCTCTATAAGCATTTGATAGAGCAG 35095 30 100.0 38 .............................. TCAATATGAAGGGATAGAAAGTGCTTACGGTGATGAAG 35163 30 100.0 35 .............................. ATATTTTTTCTGGTTCTTCTTTAAAACATATAGAA 35228 30 100.0 36 .............................. TCCAACTGTCTTCCAATAGATGCATATACTTTATCA 35294 30 100.0 36 .............................. CCGTATCCAGCATCTTGTTCGTGCTCTATTCCTAAT 35360 30 100.0 38 .............................. ACTTGTACACTAGGTATACTGGGAACACTGCCCCCAAA 35428 30 100.0 35 .............................. AACGAAGGTCGAATAAGGTCAGACAAGGAGCGAGC 35493 30 100.0 36 .............................. TATGATGATGCTAATGAACAAATGCAGGAAGTTTAC 35559 30 100.0 35 .............................. TTAAATAAGCATTTTGTTGCTCTGTTTGATATTTA 35624 30 96.7 37 .A............................ CTTCAAGTGCCTCTTTGACCTTATCCAGAGTACCCTT 35691 30 96.7 38 .A............................ TCTCCTTGGTGGCACTGGCGTTGTAAAAGACAATGCAT 35759 30 86.7 0 .A.....................A.A...T | AA [35780] ========== ====== ====== ====== ============================== ======================================= ================== 43 30 99.5 37 GTTTTTAGATTACCTATGAGGAATTGAAAC # Left flank : TGACCACCAAGGGATTTAAAAATTTACCGCCTGTTTTTAAAGGTATATGACAGAACTGGCCGTCAGTTGATTGATGGTCCTTATTTACAGCGGGATTTTGAACTTGTATAATTGTATTAAAAATTTAACTGAGGCTTGTTTTTATCCGAACGCTACCATTTGCTAATACTCTCCAGCTTCTCAAAGTGGGAGATAAGCACTGCTACGCGCCTGGGTTCTTCCCCTAAAGGATAACGTATTTTAAGTGCTAAAGGCACTAAGAATACTGTTAATAAAGTTCAGGTGGAGGAAAGTAATCCTTATTAGCAAACTCCATCTGAACCTAAGAATCACTTGAGGTAACTTTTGTTGTCGACCCTGAATAGAGTAAAAATTACCGGGGGTCGACAATTTTTATGTTTCCAGTTAACTTGCGACTTGAGATTGGTTTTTGAAATTCTTCCAAAAACTTTCTTAGATATTGCAATTTTGTACAAGCTGATGTATGCTTTGTTTGATTG # Right flank : TGTTTGAAGGGAACTTATATGAGAAAACGGCATTATTATAAAGGTGAACCAATGGATATGTTACATACGGTAGCATTTAAAGAGATGCATACTATCATTTCCTGTATGGTAAAATTATCTTCACCTGTTAATGTCAACCGTCTTAAGAAAACTGTTGAACTTACAAGTGTGCAAATTCCCGAAATCTTATGTTATTATCAACCTGCAAAAAATCGATGGGTTTATTCATCAAAATTGAAGCACACAGTAGTTGTCCAATTGGGAGAAAATGATGATCCTCCGCAGCAGCCAATTGATTTTCTTAGAGATACCCAGCTTAAAATTTTTATAAAAAATATACCGGAACCTATGATTTACATAGTGATGAGTCATATATTCACAGATGGTTCGGGTTTTAAAGAATTTCTTTATTTACTGGCTAATAATTATAACCATAAAAAATTAATCTCGAATTTTCATAACCAGCGTTCAAGTGAATCTATTGTAAAAACACTGCTCGG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGATTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 4 38523-42209 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXYI02000008.1 Clostridium sp. HV4-5-A1G strain HV4-6-A5C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 38523 30 100.0 38 .............................. TATGGAAAAGGGCATAGCCTAGAGGCTACACCCTTTCT 38591 30 100.0 37 .............................. CTCGATCAATGGGGTTAGAAATAGGTGAAAACTTGCA 38658 30 100.0 38 .............................. AGTTCAAAACATGGCTGCTTCTTATTTTGCGAATTGAT 38726 30 100.0 37 .............................. TAAAACAGTTTATCCCTGTGGTATGTGTTTCAGCTAT 38793 30 100.0 37 .............................. CCCCAATGTAGCCAAAACAATAGACTATAATGCTCAA 38860 30 100.0 36 .............................. TATTCTAATTGCCTCCTAAATTCATACCAACTTACT 38926 30 100.0 37 .............................. ATCTTTAAATTATAATTCTGTTTCTTTTTTAGGAACT 38993 30 100.0 38 .............................. ATCCATCATCTATTATTTCTATAAGCCCATTTTCTATA 39061 30 100.0 38 .............................. TCAATTTCCTTATTATCCTACAAAATTTAATTCTATCT 39129 30 100.0 37 .............................. AATATTGTATTGAAACCATAGAAGAAATCATTTTTCC 39196 30 100.0 37 .............................. TCAAATAGAAGTTGTATAACTCTCATTTTCAATTACA 39263 30 100.0 37 .............................. TTACTTACATTCACCAACATAAAAGGTGGCGTATTTT 39330 30 100.0 36 .............................. TATAAATCCTACATGGAGAGGATTGTTTGAATTTAG 39396 30 100.0 36 .............................. ACCTCTGCATCAGCCTCAATGATATTGCTATCATCT 39462 30 100.0 37 .............................. TTATGCACCTCTCATTGTAAAAGAGGATGGGAAATAC 39529 30 100.0 37 .............................. TAAGTTTGACTTTGATAAGAACCAATTTGTAATTAAA 39596 30 100.0 37 .............................. TCTAAAATTAAATAGATTAAGGAAGGAAGGGAAAATA 39663 30 100.0 36 .............................. TAAATTGATATCTAGTTAAATGTTTTGCAGTCTCTT 39729 30 100.0 35 .............................. CTGCTTATTGCGGTATATTGTCCATAAATGGGATA 39794 30 100.0 36 .............................. TTTCCCTGTTCTCAGAGAAAGCTTCACCGTATTCAT 39860 30 100.0 36 .............................. TGGGAGTGGTTTTGGTTATGTTAGATTGGCTTGTCA 39926 30 100.0 35 .............................. TTTGTATAAAGTTGACGATCAAAATTGAAAACTAT 39991 30 100.0 35 .............................. CCCACTGTTTTTTATAAAAAATTATTCAGCACAGG 40056 30 100.0 37 .............................. ATACCTAACTTTTTAGTTACTTCTCTTTCCAATTTTT 40123 30 100.0 36 .............................. TTTTTATGCTTGAAAAGAGGTGAGAACAATTACAAA 40189 30 100.0 36 .............................. CTTTTAGAACCATAACGGTCACATTCAATCATCTGC 40255 30 100.0 37 .............................. TTTGTTTTTCCCTTTTCTATCAAATCTTCCACATTTA 40322 30 100.0 37 .............................. AAAGTTGTTCCATACTTTTGCCTCCTTTCTTGTTTTT 40389 30 100.0 36 .............................. TTCCATTCCATATAGGCCTTTCTACCGTAGCATCTG 40455 30 100.0 36 .............................. TCATGATCATCCAGAATTATATCTGCCGGGACCCCT 40521 30 100.0 37 .............................. TTATGCAGGATTATTTAGACCATATAGACATAACCGA 40588 30 100.0 35 .............................. CAGGATCTTCTTCTCCACCTTTTATATGCCCCCAC 40653 30 100.0 35 .............................. AAATATACTCTTCCATCTTCACAATAAATTTCATC 40718 30 100.0 37 .............................. TCTTTAGCCTTACGATAAAACTCTTTTGATACTTCAA 40785 30 100.0 36 .............................. TCATTATCTCTCATTGGAATTAAAATATTATACAAA 40851 30 100.0 38 .............................. AAATATGGGCTTAAGGGTTTATATCGAGACGGGAGAAT 40919 30 100.0 38 .............................. TCCGGCAAAAAACAAGGTACAGCAACACAATATCGTCC 40987 30 100.0 32 .............................. TTACAAAGTTTAAAATTGGATTTTGTAGATTT 41049 30 100.0 35 .............................. CTTCATCTCCCTCAAAGATCCTCTAACCCTTTTAG 41114 30 100.0 36 .............................. CTAAATCCCCAACCGAGAACCTGCCACATCTGTCAA 41180 30 100.0 39 .............................. TGATTTAATAGATTTAAGAGAAGAAGTAAAACTTATACA 41249 30 100.0 36 .............................. CTTAATATGTTTTTCATATCGTTATCAGATATTGTA 41315 30 100.0 36 .............................. CATATAATGCAAATTTATTATTATCATCTTGAAACT 41381 30 100.0 35 .............................. CTTTCTCTCCAGAATCAATAATTTCATCTAACAAA 41446 30 100.0 36 .............................. TTGCATAATTCATCATATCATCTTGCAAATTGTTTA 41512 30 100.0 37 .............................. TTAATTCCCTTTATAAACGTTAAGTAGTCCCATATAC 41579 30 100.0 37 .............................. TCTATTTCAGTTTTTAAACCTTCTATATGCTCTATAT 41646 30 100.0 37 .............................. ATATCAAAGAATACTGTTTTTTTTCTTGTATCCATAA 41713 29 96.7 35 ......................-....... ATATCTGCTAATATAAAAGCAAATACCAGTATATT 41777 30 100.0 37 .............................. CTGAAAATCCTAATTTGAAGTTTGAAATGCTAGATAA 41844 30 100.0 38 .............................. TGGATATAGGCAACAAGAAATTGGGGATATGATGGGAC 41912 30 100.0 36 .............................. CTAAAATAAAGGTATCAGACATACAAGGTGTAATTG 41978 30 100.0 39 .............................. GTATCTCTATTCCTTTTATTTTTCTTGATCCACACGAAA 42047 30 100.0 36 .............................. TAAATGTTAAATACTCCCACAGACTCATATACATAG 42113 30 96.7 36 .............................C TGTAAAGAACTATACAAAGACGGTATAGAAACAGGA 42179 30 80.0 0 .GC......A..T...C............C | G [42192] ========== ====== ====== ====== ============================== ======================================= ================== 56 30 99.5 37 GATTTTAGATTACCTATGAGGAATTGAAAT # Left flank : AAGTTTTTTATGTTTTTGCACAATTATTCTGCAAAATATTGTAGACTTATTTTCCAACCTAATTTATAAATAAAAACAGCAAAAATCGTTGACTTACAACGTTTTATGCTGCTTTTTTCATAGTTATTCCAGAAAACTAAAAATGTCTGGAAAATTTTCAGAGAAATTCTTTATTTATGCGGCTTTAAGGCATATAATAAAAATAAAGAATGGCTATTTTACGACGCTGAACCATAACATGAGATGTATTTAAATTTTGGCGCAGCAGGATATATCGGCTATGAGGGAGTGCTGAACCTTAACATGAGATTAATTAAAAAATGTTTTAGATCTGTATTAAATTTTATGTTGTCGACCCTAAATAGAGTAAAAATTACCGGAGGTCGACAATTTTTATGTTTCCAGTTAATTTGCGGCCTGAGATTGATTTTTGAAATTCTTCCATAGATTTTCCTGGATATTGCAATTTTGGACAAGCTGATGTATTCTATACTCGATGA # Right flank : CTTATCGGTTGAAAGACATAATTGTATTTATGACTGACGTTTTAGATTATTGCTTTATAATGAAAGGTTACAAAAAGTTAATTGATACATTTGAAAGATTTCTTAAGGATATGGCTTGTAGTGTGATAGGAAAGTTGATAAAAAGTGAGTAAAAAAGAATATTAAAAGTTATGGAAAACTTGGATAAAAAATATGACGGGCTTGGAATAATGAAACTATGAATGAAGTTGAATTTTAACAATTAATTTGATGTTTTAATTGAGTGTTTAAAATGTTTTACATTATTATATAGTATATGTCTGTATCTTATACACATATCCGAGCCCACGAGACAGTACTAGATATCGTATGACGTCTT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTTTAGATTACCTATGAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //