Array 1 169950-173101 **** Predicted by CRISPRDetect 2.4 *** >NZ_FBXH01000068.1 Acinetobacter baumannii strain D78, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 169950 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 170010 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 170070 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 170130 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 170190 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 170250 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 170310 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 170370 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 170430 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 170490 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 170550 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 170610 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 170670 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 170730 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 170790 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 170850 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 170910 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 170970 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 171030 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 171090 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 171150 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 171210 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 171270 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 171330 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 171390 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 171450 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 171510 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 171570 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 171630 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 171690 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 171750 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 171810 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 171870 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 171930 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 171990 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 172050 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 172111 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 172171 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 172231 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 172291 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 172351 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 172411 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 172471 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 172531 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 172592 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 172652 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 172712 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 172772 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 172832 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 172892 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 172952 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 173012 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 173072 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //