Array 1 488652-482733 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072639.1 Chloracidobacterium sp. S chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 488651 36 100.0 35 .................................... CTTGTGCTCCAGCGCGAGATACACGTTACGAGACC 488580 36 100.0 34 .................................... TCACGCGGGCACTCGTGCGCCTCGCGCCACGCCT 488510 36 100.0 36 .................................... CTTTCGGCGCCCACCATTGTTGACTACACCCGCAAT 488438 36 100.0 37 .................................... GGCGCGGCTGGACTTGCGCAGCTTGCCGACACCGACC 488365 36 100.0 38 .................................... GGCGGCGCATGGGGGGTAGCGCGCCGTGGCTAAGGCAA 488291 36 100.0 39 .................................... ATGACGGCAATCAGTGGGAAAGGCATCAGATCACCCCTC 488216 36 100.0 35 .................................... CAAGCGTTATCGCTAGCTATTGGCGATACGAAAAA 488145 36 100.0 34 .................................... CCTGGCTTCCAATTGCCCCAAGAAATTCGCGCAA 488075 36 100.0 35 .................................... CCCACGGCGGACGGTTGGACGAACGTGGTTGTGGT 488004 36 100.0 36 .................................... CCATTTCAATAGGTCAAAGAGAGCCTTCCTGCCTTG 487932 36 100.0 35 .................................... GCGGCACAGTCCCGGTGGCGGCGTTGGTCACTGAA 487861 36 100.0 36 .................................... TAATCGTTTCCGCTGCGCGCTATTTTCGCCCCGCTC 487789 36 100.0 36 .................................... ATCTCGCTGCCGAACGCGATCAAAAAGGGTCACCGG 487717 36 100.0 35 .................................... TGGCTTTTGCCTGCGCCCGTCGGCAGGACGATGCA 487646 36 100.0 35 .................................... GCAAATACACCTGCCGTCCGACTTTTACGTGTGGG 487575 36 100.0 35 .................................... GTGTCAACACCTAATCGCAGAAAAGTTACAGTGGA 487504 36 100.0 36 .................................... AAGCAACGGGCTTTCCCTGCTTTGTCGCTTTCAACG 487432 36 100.0 35 .................................... ACGAGGGGCGCGAAGGGAACGTAGCGCTGCCTTTT 487361 36 100.0 36 .................................... GCTTGGGCGCCCTCGAAGCTGGCGCGTTCACCGAAG 487289 36 100.0 36 .................................... AAAATTGATCGCCGCGCGCGCTCCAGAAGTCGCTGG 487217 36 100.0 36 .................................... CGATTGCAATAATGACGGCGATCAACGGAAACGGCA 487145 36 100.0 35 .................................... CTGGACACCTGCGACCGCTTGGTACGCCACTTCGG 487074 36 100.0 35 .................................... CTTGCCAAACTCTTGCCGTTGCTTCCGCCGCACAA 487003 36 100.0 35 .................................... TGACCCCGGCACAGAACGTGAATCTGGTAGCGCCC 486932 36 100.0 35 .................................... CTTGCCAAACTCTTGCCGTTGCTTCCGCCGCACAA 486861 36 100.0 34 .................................... ACCTAAACGAAGACGTGGTGAACGTTTTCCGCGT 486791 36 100.0 37 .................................... ATCCTGCGCCATGTTGACGGCGTACTTTATCGCGAGC 486718 36 100.0 35 .................................... GCAACCACCACGCCAACTTGGGCGGCTCGGCAATT 486647 36 100.0 35 .................................... CGTCAACGATTCGACGTTGTGTTTCTCGTTCGGTC 486576 36 100.0 36 .................................... GCGCCATCGGACCGACCTGAAGTACAGGAGGTCGAC 486504 36 100.0 35 .................................... ATATAAACCGGCTTCTGGAGCAGGAAAAGCGGAAA 486433 36 100.0 36 .................................... CCCTGTACTCAGGGCTAAGTGTCAGGAAAACCAGAC 486361 36 100.0 37 .................................... TATCACAGAAAGCCCCGTAACGGCAAGCGGCTTTCTC 486288 36 100.0 34 .................................... TTGCTTGCCGAACTGCGCCAGTTGCCGGCACCGG 486218 36 100.0 35 .................................... CCACGACGCAAGGCTACGTTGTCGACCGCCGGGAA 486147 36 100.0 35 .................................... AGGGCAAGGCGCCAGGCAAGGCGAAGGGTAGGGCA 486076 36 100.0 36 .................................... TATCACAGAAAGCCCCGTAACGGCAAGCGGCTTTCT 486004 36 100.0 34 .................................... GAAATCAAGCGCTTACAGGAAGGGTATTGCGTTA 485934 36 100.0 36 .................................... ACTTGCTGCGGGATTATTTGAATTCAAAGTACGGAT 485862 36 100.0 37 .................................... TTCTTGCGAACGGAGTGGCAAAGCAGCGCGCCCAGGC 485789 36 100.0 34 .................................... ACCGTGCCGGGCTGAACGTCGAGAATCCCATCAG 485719 36 100.0 36 .................................... ACGCCCGATGAGTGGGCTGCGGTCAAAAAAAAGGCG 485647 36 100.0 35 .................................... TGGCAGGCGAGGTTTCTGCGAGCGTTACCGAGTAT 485576 36 100.0 36 .................................... GAGTTGCGTCAGAAGGTCGACGACGAGACAGCTTTT 485504 36 100.0 37 .................................... TCATCGCCGTCCGGCGGGACGGACTGCGTCTGCGGGA 485431 36 100.0 36 .................................... AGTTAGCCTGGAACCAAAGTTTGGTTCCAGTTGGTT 485359 36 100.0 34 .................................... ACTCGTAGGAAGAACAAGCGGCCCGGGCCACCGT 485289 36 100.0 35 .................................... CCGACGGCGCGCCAGTGCTTGCGCCGGTGGCTGAC 485218 36 100.0 35 .................................... TTACGCCGTGTGGGGCTGGCGACCACGCAAGCCTC 485147 36 100.0 37 .................................... CTGGGACAAACCGCGTGGACGGGCTGCTCGCGCCGCA 485074 36 100.0 35 .................................... AAGGCGGTCTCCCGCCGGTCATCCCAGCTCCAGTC 485003 36 100.0 39 .................................... GTCACACCCGGACGGCGAAACGGGGGCAGGTTATCACCG 484928 36 100.0 37 .................................... TAAACTCGAATTTCGTTTTCCATTTTTCCAGCTACCG 484855 36 100.0 38 .................................... GAATCGCAAGGCGTTGTGGTGACTGTCTATCGCGAAGT 484781 36 100.0 35 .................................... CTGGGCTGGCGGCGTCCTTGTTGTTGCGCAAAGCA 484710 36 100.0 35 .................................... AGCGCGATACGTGACTTCCCAACGCGCCCGAAACG 484639 36 100.0 35 .................................... CTCGCACTGTGCTGTTACTTTTTCTGGCAGAATAG 484568 36 100.0 34 .................................... GTTAATCACGATTCTCTCACCCGCCGCGCCCATC 484498 36 100.0 35 .................................... ACTTTCCCGTTGAGGACGATGGCGAAGAAGACACG 484427 36 100.0 35 .................................... CCGCTGCCTAGCCCCTCTTGGAAGGCCCTAGACAG 484356 36 100.0 36 .................................... CGCCTTCAACTCCGTCCGGGAGCAAGTGGGCAAGCT 484284 36 100.0 35 .................................... ACCACCTGATGGGCGCGGCGGGAGAAAGAATCGTC 484213 36 100.0 39 .................................... ATCCGGACACTGGTGAATCACGCCTGAAGCTGCGCACAG 484138 36 100.0 37 .................................... TGGGACTTCGGGCGTAATCCGCGCCCGGCCATCTGCA 484065 36 100.0 36 .................................... TGTTAAGATGCCGGCAGGCTCGGTGGCAAAAAGGTG 483993 36 100.0 37 .................................... AACTTGCGGCGTTGCGCTATTCTTATCAGCGGGGTAG 483920 36 100.0 34 .................................... CAGAGCAACGCTATCTTCGCGCCCTTCATCAAAG 483850 36 100.0 35 .................................... GAACACTTTGCGCATCTGCGTCTGTTGACGCGCGC 483779 36 100.0 35 .................................... AAAACGACAGCCTACGTACCGGTTTCCACCTATAC 483708 36 100.0 34 .................................... CTGACGGCGTGTGCCGCGTTGATTGACAGGTTAG 483638 36 100.0 36 .................................... AGTTGCGGGTTACAATTGAAGGGGATTTTACCGCTT 483566 36 100.0 38 .................................... ACCATTCGCCCGTCGTCAAATGGCAGAGCAACGCTATC 483492 36 100.0 35 .................................... CCGTCGATTGTGCCGCCGCTGATTAATTCGAGGCG 483421 36 100.0 35 .................................... ACAAAGCGTGAATAGAAAACGTCCGAGCCGACAAT 483350 36 100.0 38 .................................... TTCAGCCAGAACCCAGTAGGATTCCGCTCGCAGGTTGT 483276 36 100.0 36 .................................... GTAAAAACATCCGACAGCACTGATGACGTGACGGAA 483204 36 100.0 38 .................................... TGACACGTCGGTCACATGGGGGCTGGCAATGGGAGTCC 483130 36 100.0 37 .................................... ATGCCCTCCTGGAAATCCGTGCCCGGCTTGGCTACGC 483057 36 100.0 37 .................................... ATTTCGTCCATTACGGCAGCACCAGTGCGTCAATCAG 482984 36 100.0 36 .................................... CGAAAATACCGCTTCGCAGACGATACGAAGCTCCTC 482912 36 100.0 37 .................................... AGGCACAGCCCCGAAGTGGAAAACTCGAAGGCTTTTT 482839 36 100.0 35 .................................... GATTGTCGGCGGAACGCCGACCGGCGCATGGTCTG 482768 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 83 36 100.0 36 GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCAC # Left flank : TACGCGATCCAAAGCGGTGGCGCAAAGTTTATGAGCGCGTCAAGGGGAATGCGGAAAGGGTACAATTTTCCGTCTTCCGCATGTATTGCACCAAAACTGACCTTGAGCAGTTGCGTTTTGATTTGGCAAAGCTGATGACGAGTGAAGATGATTTACTGGTCATTCATTTGTGTCCCGGCTGCGCAAGGCGTGTGGTTGACACCTCAACCAAAACTTCCTGGGATGAAGAACGCAAGCGGATTGAAATCCTGTAGGCGGGCGGATTCACGCATGTCGGTGTGGACAGGATGCTTTGCCGGTGAGTGTCTGGTAAGTCCTTTGAAGCGAGCGCTTTTCCTGCCTGAATGTGGGGAAGACTTGCTTGAATGGGCCAGCGTGCTTTATTTTGCAGGAGTTACGGGCATTACCCGGCAGACGGGAGGCGGCTTGCCGCCTTTCCGGTTCAGGTGCTTGAGCAAGAAGCAGTTTTATGTGGCCAGTGCTTACCGTTTGGGGGCGCT # Right flank : TTAAGACCGGCGAATGGCGAATGGTAGATGTATGAAACTCTCTGATGCTGAGAAATGTTGATCACCCACAAGGCGTTGTCAGGCAAAAGCAATCTTGAGAGATTGCTTTTGCCTGACAACACCACATCGCCAAACAAATTGACCGACCAGCAGTTCCCCTCCCCTGTCCCTAACCGGCGAAACCCGGCGGGCCAGGCAATCCACCAGTACCGCAGCGTGCTGGACAGGACAAGAACAACCGGTAGTTCCAACGGCGGTTCGGGCGGCTTTCGGCAGGAAACCGCAGCGTGCTGGACAGGACAAGAACAACCGGTAGATTATTCAATGCCACCATCACACGCCCCGCCACCCCGGCCCTCATCGCACCACCCAACGTATGCCCCGCTGGCTGTTCTGCCTCATCATCCTGCTGTGCAACACCCCCGGAGCCTACGCCCTCGACCCAAACAAAGTCCTGACGCAATACGTCCGCCAGGTCTGGTTCGCCAATGACGGACTCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 2 1083735-1083333 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072639.1 Chloracidobacterium sp. S chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ========================================== ================== 1083734 34 97.1 41 ...........T...................... GGGGTAGGAAATAGCGGACAGGGGGTAGGAAATAGTGGAGC T [1083720] 1083658 33 85.3 39 ...G..A.G..T..-................... TATTTTCTATTCCCTGTCCACTATCTGCTATGTCCGCGC 1083586 34 100.0 39 .................................. GTTCGGGCGCAGGAGGCCGGATTATATCCGGCAGAAGGC 1083513 34 100.0 37 .................................. TCGTGTCATGGGTCTTGAAAAAGACCCCTTGAATTGC 1083442 34 100.0 42 .................................. TACCCGCGTCAGAGGTGCGCGTCCTCTGACGCGCACTCCGCT 1083366 34 70.6 0 .CA.TG.AGC.GCT.................... | ========== ====== ====== ====== ================================== ========================================== ================== 6 34 92.2 40 TTCAATGGAGCCGCTTTTTTTCAAAGCGGAAAAC # Left flank : AGGTCAACGTGTATCGCCTTTTGTGGGGCGAGGAACTCGTTTCAGCGAAAGGTGAGGTGGACAAGCGGGGCGATGGCGATGGCGAACACACGTTTTTTCACAGCACGGCAAAAAACCTGGTGTTTGTGGAACATGAGACACTTTTGCGGCCCCGTCAGGGGTGGGCGACAGTGCGGCGTGAACCGCGCCGGAAGCTTACGGTCCGGGTGGTTGTTGCTGGAACGGACCTCAGCGGCCGGTCTTTTGAGCAGGAAACGGAGACGGTGGATGTCAGCCAGTCAGGTGCCTGTGTTCGGCTGGCGCAGCCGATGGCCATTCCATCACCGCTCACCGTTTCGGTGCCGGATTATGGTTGGCGTGGAGAGGCGATTGTACGGACGATTGCCCGGGATGAACAGGGGTATCTGACCGGCATCGAGATTATCGGCCAGGCCCCGCACTGGTAGGGGTTGGACGTTCTCGTAAACTCCTGCTTTGCTCCATTGAAGCCTTGCAAAGGT # Right flank : CGCACTCTCACAAGTCCCTTGCTTTCAAAGACCTGCAGGGTATCTTGCGAGCGGCGGAGAGTTTGTACCCACGAAACCCGGATCGCGTCAACCCTGTTTTTGTAAACTCAAGCCACATAAGCCCCTAAGTCCTGCGAGCGGCTCCCGCACCACACGGCACCACCCCGCCTCTCGCACAGACCCCACACGTCACCACTCTAAGCCAATGAACGCTATACAACAACCGTGATGCGCTCCGTCGGCGCCACTTCCAAAGGCTTCCCAAGCGCCTCGATGCAAGTCCGGCCACGCCCGTCCACCGGACCAACATCCACCAGCATAATCCGATCCTCACGCTGGTTGATTACTTCGGTCACCGCCATCAACAACAGGACACGCTCCGTCGCCGACAAATCACACCGAAAAACCGAATACTGCAAGGGATCGCCAAATCCACGCATAATCCGATAGACCTGACGCCACCGCTTCGGATTGGCAATGTCATAGCAAACAATGTACCG # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCAATGGAGCCGCTTTTTTTCAAAGCGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.82%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.30,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //