Array 1 1047-2474 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFKPX010000007.1 Bacteroides fragilis strain FJNDD6M5 Scaffold7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1047 47 95.7 30 ..........A...C................................ AAATATTCCTGATTCAAACTTTTTAGTTGC 1124 47 100.0 30 ............................................... TGCTTAAAGGCTATTCCATAAGTCAACGTA 1201 47 100.0 30 ............................................... CGTTGTCATTTCATCCAGAAAATAGACGAA 1278 47 100.0 30 ............................................... AGAATAGAAAACATCAGCTTGAGATGCAGC 1355 47 100.0 29 ............................................... AAAGAGGCTAATTATCGGTTACCCGGCAT 1431 47 100.0 30 ............................................... AATCGGTTTCGAATAATACAAACGACACAG 1508 47 100.0 30 ............................................... CAACGAGCTTTAACAAGGTCTTGCGACCAG 1585 47 100.0 30 ............................................... TCAGACTCCGTATTAGTCTTACGAGCGTCA 1662 47 100.0 30 ............................................... TCGTCCTCTGTCAGTTCCCACCCTCCTTTG 1739 47 100.0 29 ............................................... ATTTAGTTAAAAAGTATGTGGCTAAATCT 1815 47 100.0 30 ............................................... AAGGTGTTCGGTTTTAACTTCCTTGCACCG 1892 47 100.0 29 ............................................... GCGTAGACAGGGACGGGAACGCTAAGTTA 1968 47 100.0 30 ............................................... CTGATAACCGTTTTGAGTGATTATCTTTGC 2045 47 100.0 30 ............................................... GGCAAACGGGCACATCTATTGCCTTGATGC 2122 47 100.0 29 ............................................... AGGGTCTTGAGACCAACGATCCATCTTAC 2198 47 100.0 30 ............................................... TAAAATTGTCCTACTGGCAAATACTCAGTA 2275 47 100.0 29 ............................................... AAATAAGGATTTAAACCAGCTTCCTCTAA 2351 47 100.0 30 ............................................... CAATACGAAAAAGGGACTGATCATCACAAC 2428 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 19 47 99.8 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGT # Left flank : GGGAAAAGGGAGGACCAAGGAGACACATTATTATAATATATAGAGGGGGAATACTTGGAAAACAAGGAGGGGGGATTCATTGGGGAGGGAGAGGAAGAAGGTTTTTTAGTAGAATTGCGGAGAAAGATTGGGAATTTGGCGTTAACATTGTTAATGCGATTGAAAGGGGAATTTGTTTCAGGAGCGGAAATAACAAGGCTTTTGGATTGAAAAGACTTATTATTTGAAGATAAAGGACTTGATTTAATAGGGTGTTAAATCAAGTGATAGGAAAAGAAGAAACAAAAGGGAGAAATGGATTGAAAATGAAAGTAATAGAGGGACAATGAGTTATTTTTCGGAAAAAGGGATAAGTGGTGGACAGAAAGTGATAGTTGTGATTAGAACAAGTATGATTGTAGAGGATTTTTAAAGGAAAGGTTTAAAGTGGAAACGGAGGAGTACAATTACGAAAGACCATTGGAAATAGCATATGCTATCTGATGAAGACAAAGCGATGC # Right flank : TATATCCCGCATAATAAAATGGTTTTCAATAAGTTAAGAGTAAATCAGAAAAAAGAAAAAGAAGACTATTTCCAGCATAAAATCTCGTATTAATGCGAGATTTTGTTTTCTAGAACAACTCCAATTGCTGTCCCGGCGTATTGACATCTTGCACTTTCTTCCCATAAAAAAGTTCTATATCCCCAAATTGTTTATCTGTAATACACATGATTCCGACATGCCCAAATTCAGGGAGAAATGATTTAACTCTTTTTATATGTACTACTGCATTCTCGCTACTGGCACAGTGACGCACATAAATGGAAAACTGAAACATCGTAAAACCATCCTTTTGTAGATTCTTTCTGAAATCTGCATAAGCCTTTTTCTCTTTCTTCGTCTCAGTTGGCAAATCAAAAAGAACAAGCACCCACATAATACGATATTCATTAAAGCGATCCATAATCTATCGTTCGGGATAAGAAATTCTCCGAAGCTCTCCATTGAAACATTTATAAAGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //