Array 1 26298-24414 **** Predicted by CRISPRDetect 2.4 *** >NZ_OAIG01000022.1 Neisseria meningitidis strain Neisseria meningitidis isolate 22822, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 26297 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 26231 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 26165 36 100.0 30 .................................... AGGGGTCGTGAATGGAGTTCTTGCAGTTCG 26099 36 100.0 30 .................................... TAAGCGTTTCTTTTTTGGTCTGCTTCTGCT 26033 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 25967 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 25901 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 25835 36 100.0 30 .................................... TCAGCCTCAAATACATCCGCCAAATCGTTG 25769 36 100.0 30 .................................... ACACAATCTCCGCCGTTCCAATCAAATGTG 25703 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 25637 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 25571 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 25505 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 25439 36 100.0 30 .................................... AATGATGTATATAAAATGCCGTAAAAAATG 25373 36 100.0 30 .................................... CGTCTGAAGGTTTGCCCATCTCCTGACAGG 25307 36 100.0 30 .................................... TCGATTGTCTATGAAAGCACTTGATGATTT 25241 36 100.0 30 .................................... CTCTTCATTGAAGAAGTTATAAGCCTTTGT 25175 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 25109 36 100.0 30 .................................... GCCTGCGTACTTGGTACGCTGGTCGCCTCC 25043 36 100.0 30 .................................... TTCATAGATCGATGCATGAGGTTTTCATGG 24977 36 100.0 30 .................................... AGGTCAAAGTGTCAGGCAAATTTAAAGGTG 24911 36 100.0 30 .................................... AAATCCATTTATCGCCCACCCTTTCCGGCC 24845 36 100.0 30 .................................... TGCTGAAATTATGGCAAGTATGGGGCAAAG 24779 36 100.0 30 .................................... TAGCAAACAAGGAATATTCAAAGTCCTTTA 24713 36 100.0 30 .................................... CGGCAATGCGGCGGCTGTGTTGGTTGGCGA 24647 36 100.0 30 .................................... AGAGCGCGCTGAGGCGTTCGTGGGTTTGGA 24581 36 100.0 30 .................................... TTGGTGGTCGCGCGTGTTAGACGGCAGCTA 24515 36 100.0 30 .................................... ACGTATTCGTAAATTAACACCTAGGGAATG 24449 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 29 36 99.7 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //