Array 1 37878-37215 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWFA01000022.1 Bacteroides intestinalis strain BIOML-A1 scaffold22_size94878, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 37877 47 89.4 30 ......G.C...........A...................A.....T GCTGATGTGTTTGAGATAGAATACACCAAG 37800 47 100.0 30 ............................................... ACGAAAGACATCGTAGATAAACCCTTTCTC 37723 47 100.0 30 ............................................... GACATCATAACCAATCCGACACCGGAAGAT 37646 47 100.0 30 ............................................... TTCAATTCAAAGTTAAGTTCTTTGGTACAA 37569 47 100.0 30 ............................................... CCGCAATAGCATCACGATGGCGTTCAATCA 37492 47 100.0 30 ............................................... CTAACACACTCTGGTGATTTGCTACCAAGT 37415 47 100.0 30 ............................................... CCTGGCTGTCAGCCTTAGACATCTTCAATG 37338 47 100.0 30 ............................................... AATTTGACAAATTCTTGTTGTTTGATACAA 37261 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 9 47 98.8 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATAGGGAACAGC # Left flank : CAAGAAGCACATGGCTATTGCCAAGGGTTTGCTGAGTGAGGATGATTATTTGCTTCAGGAAATTCTCTTTAATCCGCGCACTCCCTCGCAAGTGGAAAATATTCGTCTGGAGCTGAAGAATTTGCTGGAAATTATCAGTACGAAGGATGCGGAAGGGATGAAGCAGTATCTGACGAAGATTAGGGAAAAGATAAAATAGATAGGTGAGATTAAGGGATTGAAGAGAGGAGGGGGACGAAAAAGGAAATGGGGCTTCTCTCTTCAATTTGTTAATAAAGAGAGGTGATGATATTTAGGATTAGGTAGGGGCATACTTATTTCTAAAATTATTGAAAATAGTCAAATATTGGCAGGAATGATATGAAATTCTCGTATACTACTTTATTTGAATTATTGTAAATGACTCTGTGTTTGTTTTGCTAGAACCATATTGTAACTGACTTCTATTTAAGTAGAACCATTGGAAACAGTGCATAGTATTCCGTGAGAAGTGCCCCGTC # Right flank : ACGACCTACGTTACATACTGATATCCAATTGGTTACAAACCATTTTTGAATTACAAAAACAATACTGTTTTTAATTAAAAAATCCCGCATTTAAGCGGGATTTCTTTTTCTAGAAAAGCTCTAATTGCTGGCCGGGAGTATTTATGTCCAAAGATCTTTTCCCATAAAACAACTCTATATTTCCAAATTGCTTATCTGTAATACACATAATTCCAACCTGTCCATGCTCCGGCAAGAAAGATTTAACTCTTTTTATATGAGCTTCTGCATTCTCACTACTAGCACAATGACGAACATAAATAGAAAACTGAAACATAGTAAAGCCATCTTTCTGCAGATTCTTTTTAAAATCTACATATGCCTTCTTATCCTTCTTTGTTTCAGTAGGTAAATCAAATAATACAAGTACCCACATAATACGATATTCACTAAATCGGTTCATCTCACATTTCCGGATATATTATTCTACGTAGTTCACCACTAAAGCATTTATACAGAGA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATAGGGAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //