Array 1 732591-725209 **** Predicted by CRISPRDetect 2.4 *** >NC_017276.1 Sulfolobus islandicus REY15A, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== =============================================== ================== 732590 24 100.0 39 ........................ AAATTCCAATTAATTCTACACCTTGTAAAAATATTCCAA 732527 24 100.0 40 ........................ CTCTTGTAAGCTTTAAGAATTTCAATCTTTTTATTTTCTT 732463 24 100.0 39 ........................ TGAGAAAAGATAAATGGTGAAAGAAATGAGATTTAAAGA 732400 24 100.0 40 ........................ CTGGTCCTCCTATGGACCAAATATAATATATTATATCTAG 732336 24 100.0 42 ........................ CTTTCCATTTTACTATTTCAAAGACCTTGTCGCTGAGAATAA 732270 24 100.0 40 ........................ GTTGGCATAATCCTCAACATACTTTCTTGTGTCGGGTATG 732206 24 100.0 39 ........................ TTTAGAGTTGGAAAACAACAATCAGACATTTATTGACTA 732143 24 100.0 39 ........................ TTGTATATCACTTTTTCCTCTTTCTTGAAGATAATTTAT 732080 24 100.0 39 ........................ TATTATTCTCCTTTTCAGATCGTTTTCCTTTCTGTTCTT 732017 24 100.0 40 ........................ GGTTTGAACTTCGAAATTGACGGTGGTGTTGTAGTTTCTT 731953 24 100.0 40 ........................ TTCCTGTTTATTCTTATCCTTTAGAAATTCCTGCAAAGGC 731889 24 100.0 39 ........................ TTCTTTATGAAGTTCGACAACGGTAAGCTAGACTTTAAA 731826 24 100.0 40 ........................ AGTAGTGCAATAATCACAGTAATGGCAATCCCTATCAGTG 731762 24 100.0 41 ........................ GTCCATTTCGTTCAATAAATTATCAGAAAAAATAAAAACTT 731697 24 100.0 44 ........................ CCTAAGAAATATGGTTTATCGTTAGGTGGTGGGGTTGAAGTCGT 731629 24 100.0 39 ........................ CTCTGTAAACTGGGGTGTTTATTCAGTTTTTGTAACGTA 731566 24 100.0 40 ........................ GCGATATAAATCACACCGTTAAGGTACGATACAAAGTTGA 731502 24 100.0 40 ........................ CAATAGTGCGAAAAACTGAATATATGATACTTTGCAGCCG 731438 24 100.0 44 ........................ AACAAAATAATTATCCTCCACCAATAGGTGGGCTAACTACATCT 731370 24 100.0 40 ........................ CAAATTTTTAAACATATTCCTGAATTTGTGCTTTTAATAG 731306 24 100.0 39 ........................ TAAAGTTATCGATCTGCTCCGGTAGGAAGAAATAGACGT 731243 24 100.0 42 ........................ CAAACGAATAATTAAATAGACAGAGGGGGAGAGTATGCAAAA 731177 24 100.0 40 ........................ GATTTTCTTGCCTTAAAGTATGACACTAGCTATAGAGTAA 731113 24 100.0 43 ........................ GGATATACCGTATTTCTCAGTGATTAGCTCTAATTCGGCGTAT 731046 24 100.0 40 ........................ TTCTAGTTGACGCTAACGACAGAAACGACAGTAGTTTCAG 730982 24 100.0 41 ........................ ACATTTTTTTGATGTATTCTAATGTCTTACTCATATTTATG 730917 24 100.0 42 ........................ ATTAGAGTAAACATTGATTGGGAAGATTTCAAGAAAGATCAG 730851 24 100.0 37 ........................ TAATTTTCTCCCTTAACCTAAAAATTTCTCTTTATAA 730790 24 100.0 42 ........................ CATCTGGCGGTATCTGTTCACGTTCTTCTATTGGTATATAAA 730724 24 100.0 41 ........................ GAATAACAAACATAAGCGTCCGCAGTGCATGCTGAAATTGT 730659 24 100.0 39 ........................ ATCAATGTCATGGACAATCTAGATTTAATTCCTATGGAG 730596 24 100.0 41 ........................ AATGAAGAACCTAGCCACCACCCAATTCCCAGCATTGCGAT 730531 24 100.0 43 ........................ TTGACAATCTTTTGTTGATGATTAACGTTAGCAACCAAATTAT 730464 24 100.0 40 ........................ CTCGCTAAATAGCTAATTAATGCGTAACGAAGTGAGTGTG 730400 24 100.0 39 ........................ ACTATTATCGCATTTTCTTGGCTCGTCATCCATGACAAC 730337 24 100.0 42 ........................ TCTAAAGCTCTCGTGTAACTCAGAAAACGTCCTACAGTATAG 730271 24 100.0 46 ........................ ATGAAAAAAATTATTTTTCGTTAATCTCTACTGGATAGATCGCTCT 730201 24 100.0 39 ........................ GGTTGAACAATTAGTGTATGCGATAAATCCAAATACCGG 730138 24 100.0 40 ........................ ATAAAAAATATAGAAATTATGACATTGTAGAATTCCTTGA 730074 24 100.0 47 ........................ CCGACCCTTCTCTGTAAGCTCATAAACATAAATCCCTCTTCTGACAG 730003 24 100.0 42 ........................ ATTGTGCAGTCTGTTGCGGAGAAGTTTGCCATATCGTCGCGT 729937 24 100.0 45 ........................ AAATATTGTTGTAGTGGGCACTGATCCGCCTACGACTCCATTACC 729868 24 100.0 38 ........................ CAATAATTGATAAAGTTCCGCTGTGATTCTCTGACTTA 729806 24 100.0 40 ........................ GAAGCTTCGGCACTGACTTTACTGTTGTGATAATTACTAA 729742 24 100.0 40 ........................ GTTAATGATTTCGCTCCTAAAAATCCACTATTTAGACCAG 729678 24 100.0 41 ........................ TAGAGGAGAAGACAGAGAGTAAGTGGCGGGGTCTGCAAACC 729613 24 100.0 39 ........................ CTTCAAATTCTACTATTTCTTTCTTATTTTTTCGTGACC 729550 24 100.0 40 ........................ TTTTATTCTATGTGGAGATGGTCAAATATAGAGTTCTCAT 729486 24 100.0 42 ........................ TACCAAAATGATAGGTACATTTGCCACTCTGAAGAGGTCTTT 729420 24 100.0 45 ........................ ATTACTTCTATGCTGTTCTTCTTCGACCCGACTTACATAACCCAA 729351 24 100.0 40 ........................ CAGATGTACAAAGTAAATCCAGGGAGGATTTAACACATTA 729287 24 100.0 41 ........................ TCAGTTACGTCTAATATTAATCGTACTAATGGCTCTAATTT 729222 24 100.0 42 ........................ TTCTTGATAAAATAGAAAGGATTGTAAAATGATTTTTATTTT 729156 24 100.0 39 ........................ ATGATTATGAGAAAGCAATAGAATTAGATGGTGAGACAA 729093 24 100.0 40 ........................ TTAAATCGGACTGAAATTATCACATAAAGCTGATAGTGAA 729029 24 100.0 40 ........................ GAATTCTTTTTTCGAATTGCTAATCTTCTTACATTCCTGG 728965 24 100.0 39 ........................ AAGACTGATAACATATGGCGACAAAAGCGTAATTGAAGT 728902 24 100.0 39 ........................ CGCTCTTTACCGTACGGGTCGCCACTCCGTACGGTAGCA 728839 24 100.0 40 ........................ AGAGGACACAAGCTTCATAGTGACCTGAACGGTGCTTTAA 728775 24 100.0 40 ........................ AAAAGCAGAGCAGTGGTCTTATTGCATAGAAGCAGAAATG 728711 24 100.0 39 ........................ AGAATACTAATTGTTATAGAATCATTTGGCAACCTATAT 728648 24 100.0 38 ........................ TATTTTTTAATCACCACATGAATCCGTTAAAGAACTCA 728586 24 100.0 39 ........................ TTTTACCCAATGCACCGTATTTCTACTATATACTCCCAA 728523 24 100.0 40 ........................ TTCATTACCTTTTCCATGGGTTTGGATTTGTTTTGGGGTG 728459 24 100.0 42 ........................ CTATTTCACGGAGATGCTGAAGATCCTTTAACAGCTCTCCCT 728393 24 100.0 41 ........................ TACAAAATACGAATTCTCTATTATCATCAGTTATAAAAGTT 728328 24 100.0 42 ........................ GTGACCGCTAACAACAAAAGTATGAAGAAGGCCGCAGCACCG 728262 24 100.0 37 ........................ CATCCTCGTGCTTGAATGTATGGATACTTATCAACTG 728201 24 100.0 39 ........................ TTAAAGCTGCCAATAGGATTTGTAACAGTTGTACTACCA 728138 24 100.0 42 ........................ TCTTCTTTGTCATCTTCGCAGTCGCGGGGCTTATCGCTTATC 728072 24 100.0 40 ........................ AAGCCGATAGCAACCCCTATGCCTATGCCCATTATTACCC 728008 24 100.0 40 ........................ GTGGTGGTGAAGATGAAGATGGAGGAATTCCCCATGAATG 727944 24 100.0 42 ........................ TGATTTTAGGATCAAATTATGGAGTAATTCTCCATTCATATC 727878 24 100.0 41 ........................ ACTCTCTTTTTTAGGCGTTTTTAAACCTTTCCCTAAACTTA 727813 24 100.0 40 ........................ TAGTATATTCCCCACCGCCAACGGTCAACAATCTCATCTA 727749 24 100.0 40 ........................ GAAGTCCTTCGCGGTCTGGGATGGCTAAATAGCAAAAATG 727685 24 100.0 41 ........................ CAATTCTGCCCAATTTCGTTCAGGTCCTTTCAGATCTTTCT 727620 24 100.0 41 ........................ TTTCATCTTTCTGGGCAGACTCAAAAAATCTAATCAATAGT 727555 24 100.0 40 ........................ TATTCTGTCTTCTAATTGTTTATCGTCAACCGTTAATACC 727491 24 100.0 42 ........................ ACTAATATCAATTATCAAAAGTATAGATGAGGAGAGACCTCG 727425 24 100.0 39 ........................ ATACTGGGAAGCATTTTTATTAGTCTCCCTACCCTTTCT 727362 24 100.0 40 ........................ TCACCCTCAACAGTGACAATTTTTCCGTTTAGTTCTATGG 727298 24 100.0 42 ........................ AACGCTATTTCTTTAATTGTAAAGCCCTCGCGGGCTAATAAA 727232 24 100.0 40 ........................ TCGCAGATAATTGCAGAGGCTAAGAAGGCGAGCGATTATT 727168 24 100.0 40 ........................ CTTGATCCTTCTTGAAGTCTTCCCAATCGATATTGACACG 727104 24 100.0 41 ........................ TTTAACTCCCCAGTTTCTCTCTTTATTCTCTCTATTATCAT 727039 24 100.0 40 ........................ AGAGACTCGGGGATATGTAGGATATTTATCGCACCATTCA 726975 24 100.0 39 ........................ TCCAGTCTGCAATGTCACGGAAGAACTTTGCGACGCCTA 726912 24 100.0 41 ........................ TCCTTTCCAATTACTTCAATTACAACTCTATTAACAATATC 726847 24 100.0 39 ........................ ATCGATTACCGATATTCTGGCCCCCCGGCCAGAAATTTG 726784 24 100.0 39 ........................ TATTTAAGAAGAGATAAGCGGCGAAAAGTTTAGGCAATT 726721 24 100.0 39 ........................ CCAGAGTCCTTGTCCCAAGGTATATAGCTACGAGTGATG 726658 24 100.0 38 ........................ CAACAGGACTTAACTAAGATTTGTAGTAGCGAATTTTT 726596 24 100.0 40 ........................ ACACTAGTGACGTCGCCTGCCATGAAAGCTACCATGTTAG 726532 24 100.0 41 ........................ ATGTAAATCTCTAGTTCCCTACTGACGTCGTAGTATGCCAT 726467 24 100.0 43 ........................ AGAGTATCATCTTGCGAATCAAAAAAATAGTACGTTTTTACTA 726400 24 100.0 40 ........................ ACACTAGTGACGTCGCCTGCCATGAAAGCTACCATGTTAG 726336 24 100.0 41 ........................ ATGTAAATCTCTAGTTCCCTACTGACGTCGTAGTATGCCAT 726271 24 100.0 43 ........................ AGAGTATCATCTTGCGAATCAAAAAAATAGTACGTTTTTACTA 726204 24 100.0 41 ........................ CAAATTCATCAATTACAATTTATATGTTTGTAAGAAATTCA 726139 24 100.0 39 ........................ TCTAGGTTTAAGACTTGGCTCAGAACTTTAGTTAAGTAA 726076 24 100.0 43 ........................ CAGTTTTTCCAAAGAAGTTACAGGTATAGACATATCGGGCGTG 726009 24 100.0 44 ........................ ACTATAATGAATTAGATCTTTCCTAGTTCTGCTTTGTATATCCG 725941 24 100.0 41 ........................ ATCTACAATATATTGTTTGTTTGGTGGTATATAAAGTTTAT 725876 24 100.0 39 ........................ GTAATTCTTCTTCAGTCGGTAGTTCGTTTGAAGCCCCTA 725813 24 100.0 41 ........................ TTCTTTTTACTAAATACGAATAATCCAATCAGTGACTCCTT 725748 24 100.0 38 ........................ TAAAGTGCAGACTCACTAACTCTCTTTCAGTGTCCCAG 725686 24 100.0 38 ........................ TATCAATTTCCACCACATTTACCCAAAACTCATTGCCG 725624 24 100.0 44 ........................ AAAGTTCTTATGGCAAAAATTAGGAAAAAACTCCTCAACTACGC 725556 24 100.0 39 ........................ TTCTTCCAGGGTCTGTCCTTCTGATTTTGTACATCTCTC 725493 24 100.0 41 ........................ AGAGATTTCCGAATTCCTGAAAGACAGAAAGTTCACCGCGT 725428 24 100.0 40 ........................ TGCCATCGAGTCACTAGGGGCATAAGTCAAATCGAACCCT 725364 24 100.0 42 ........................ GACAAAGTTAAAGAAGAGGCAATGAGACAATTTTCATTCTAA 725298 24 100.0 42 ........................ GACTATATAATAGCACAAATTACTTATGATCTGAAACAGCTG 725232 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== =============================================== ================== 115 24 100.0 41 GCTAATCTACTATAGAATTGAAAG # Left flank : TCAGACATGGACAAGCCTAGATATCTTCTGGGTTTTATTGGAGGCATATGATAATTCCAACCCCTTAGTTCCTCCTCTATAGGGTCAGAAGCCCTATAGGAGTGAAGCCTCCTAACCTGTCTAATTATCTGCGACCTCACATTATACATTATGCAAAAAGAATCTAAAATACACAATAATGATCCTTGTAAATTTCTTCCCGACTTTAGTAAGGATAATCTTAATAAACGACGATTTTCCTCTTGATGAAGAATAATGGAAAATATAGGGAAAGTGTTCTCCCGTATACGATCCTTGTTTTCCTTTTTCCTTGTTTCGTTTTGGGTTAGGTTGTTATCCTAAATTCATTATCTTTATGAAGAATTCCTTAAGATCCCGGGAAAACCCGGGAATAGTAAAAAAGATAAGAAAGAGTAATATAATACTAATCGAAGAGTAGAGAAGAAAAACTTATAAGAAAGGGAGAAGAAAAGATCAAATAGAGGGTTAAAAAACCCTCA # Right flank : TCATACGTTTCCCCGACTACACACCAAAGGAATAAGGTAATGGTTTCCCTATTAATGGAGCGGGTAATATTCTAGTAAGAGTTAAGAGTAGGTAATTTATCCACCAAAATACTAAGTTAAGCACGTAAAGTACCTTGAGGTAAGCAAGCTTGAAAATCATGATCATAATTATCCCTGCAACTATTGCAATTACTGAATCTATTACGAAGAATAACCTTATTCCGTAAGGTAGTAAACTAATGTTATATAATGGAAAATGATCGTAGGCCCAGATGAAAGATAATATACCTCCTACAACTCCCAATATAATTGAATTTTGTTTTAGCATGAGCTACTCTTCTTACCCTATTTTAAAATCTCTTCCCAAATCTAAAATTAAATTACATAAATTGGGAAAAGATTTATATTAATTGATGAAAAGATTATCTCGATAGAAATGGATAAGAAAAAATGGTCCTCTTAGGCCTCTCTGCAATAATCCTAATAATAGGAGGAGTTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 2 736642-742629 **** Predicted by CRISPRDetect 2.4 *** >NC_017276.1 Sulfolobus islandicus REY15A, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ================================================= ================== 736642 24 100.0 39 ........................ ACACTGGGCGATAACGGGAACGACAGGGGCGGGAAAGAC 736705 24 100.0 40 ........................ TTTATTTTTTCAAACTAATTCGCAAAAATTGAAAGTCGAA 736769 24 100.0 41 ........................ TATAATTATCTTTAGTCTTCCATCCATGGTATTTCAGAAAA 736834 24 100.0 44 ........................ TATAAATATGGTGTCAGTGACGAATTAAAAATAACATAACCAGT 736902 24 100.0 40 ........................ TTACTTCTTAGTGTTTTTACGAAAGTGAAAGCATTATCGC 736966 24 100.0 42 ........................ TCAATATATCTTCCAATGCTGTTTTTGATATAGTCGACAACC 737032 24 100.0 42 ........................ GAAATAGAAAAAAGCTTTAAGAATTAAATATCTCTTCTGCCG 737098 24 100.0 40 ........................ AAAGAAGATCAAGATTTAAGATATGTAATGACCTTTGGAC 737162 24 100.0 39 ........................ CAACTTTAACACCAATTTTTTGGTTAATGGCACATAAAA 737225 24 100.0 40 ........................ TCATCTAAAACGTAGATATTGTATAATGGGGGCATTCTAT 737289 24 100.0 37 ........................ ATATTGCTTTAATCCTCGACCTACTGTCCTTAGTTAT 737350 24 100.0 39 ........................ CACTAATTATTGAACTAAGATGGGTTTTGTAAACTGTCC 737413 24 100.0 41 ........................ AAAAAATAGATATTACTTTATGCTTTGTCTCCTAGAGCGAA 737478 24 100.0 39 ........................ TATAATAAATATTATGTATATGGTTTGATTTACTTGTTA 737541 24 100.0 43 ........................ ATGTTGATTATAGTTAACTGTCCATTTTGATAAATTTCTATTC 737608 24 100.0 40 ........................ TTAATTTTATCATCACCCTATTTTCTCTTGCTAATAACTT 737672 24 100.0 42 ........................ AATGTATACACTTGATAAATTGGAATTATAACTTTCAATCCA 737738 24 100.0 38 ........................ GTCTCAAATATGTAGCTATTGCTGAACGTTATGAAAAA 737800 24 100.0 40 ........................ TGACTGTTGATATAAGCCGTATCATTAATGCGTATAAGGT 737864 24 100.0 40 ........................ TTATTATATACGATAATATCATAGCCAACGTCTTTCAACA 737928 24 100.0 37 ........................ CCACCTGGCGTGATATAGATATTCTTATATTCAAGCA 737989 24 100.0 37 ........................ TTACTAAGAAATACTGAACCATACATATTATTTCTAG 738050 24 100.0 45 ........................ ATTATAGAGATATGGACTCTCACAAACAAAAGAACTGTAAACTGG 738119 24 100.0 42 ........................ ATATTGATTGATTAAAATAGCGTTGTTTAGATAGTTGTTAAT 738185 24 100.0 44 ........................ GTTATCGTACTTAATTAATATGTTGAATGGTAACGTTATGTCTA 738253 24 100.0 39 ........................ TCATACACCTTGTGATTAATTTTGTTTGACTTTAACGCT 738316 24 100.0 40 ........................ AAGTTTATTACCATTTTTGCTGAAAACGAGGATGAGGCAA 738380 24 100.0 45 ........................ TTAACACTAGAATTTTAACGTCTTCGTCACCGATATGATATTCCT 738449 24 100.0 44 ........................ CTTGTTCTTGTACTAGTTGGTCTGGCACCTCGACTATAACTTTG 738517 24 100.0 43 ........................ TCATCAGAGACCCCATCCTTAACTTTCTCATCGCCTTGGAAGG 738584 24 100.0 41 ........................ TCTATTCTTCCAATACCTCTCTAATTCTCTAAATTCCTCCT 738649 24 100.0 38 ........................ AGTTCATAGAGCCCTATGGGAATCCCTACTAATCCCGC 738711 24 100.0 47 ........................ TTTGTGCTATATATAATGTAAGCTTCTGATGAATTGAAAAATATCTG 738782 24 100.0 42 ........................ TTTTTCAGCGTCAGGCCAGACAGAAGCGATAGTTCTATTCCT 738848 24 100.0 41 ........................ TTCTCTATTCCAGCCATCTCAACAACTCCTCCTCTTTAACC 738913 24 100.0 42 ........................ GTTTCACTAGACCGTGACTGTCGTTTAGCTCCAGCGGACTCG 738979 24 100.0 45 ........................ AAAAATATTTATAGAGAGAGATGAGTGAAAGTATATGGCAATAGG 739048 24 100.0 39 ........................ TTTTTCAATATAAAACTACATTCCTGCCATGAACCATCT 739111 24 100.0 42 ........................ GAGAAAGATACGTGTTATCTATTCGTAGAGCTTCTTATTCCT 739177 24 100.0 41 ........................ TCGTTTTTTAGGGAAGAGTTTGGCGAGTGTGCAGCTTATTA 739242 24 100.0 41 ........................ TCGCTATTATTGTCAAAGAAATAATATACTTTTATCTCCTG 739307 24 100.0 39 ........................ TTTTTATCAACAATAACCTGAAATTCCTCGAATCTAAAT 739370 24 100.0 43 ........................ CTCAATATTTTCAACCGACTGGAATAATATAATAAATCTGAAA 739437 24 100.0 39 ........................ TCATTTCCTAAGATCCCTTACATTTTCCAAGTAAGAGAA 739500 24 100.0 38 ........................ TTAGGAGTCGTAGCACAGGGAGCTGTACAGTCACAGAA 739562 24 100.0 39 ........................ ACTATATACTCATAATCTCCTATTATTTGCCTCTCGGCA 739625 24 100.0 39 ........................ TAAGTGTTACGATCTTTTTTACCGACCCTTTTTCTGATT 739688 24 100.0 38 ........................ ATTCTGTTCTTTGAGAACGGGTATGAGACTATCTTTAG 739750 24 100.0 40 ........................ AATATAATTCTTGTAAGCCTAACACAATTTTTCTAACTTG 739814 24 100.0 41 ........................ ATTCTGTTGTAATAGTTCTTGTAATTCTTGTAATGTTAACA 739879 24 100.0 40 ........................ TCACTCTATTAGGCTATTGTTGTTTGTGCTTCTTCCCTGT 739943 24 100.0 40 ........................ AAAATGTTAAACATTCTAAGATCTTGAAAATCTGTTCTTG 740007 24 100.0 39 ........................ TCTTCTTAGTTACTTTGTTTACGAAATCAATTGCATCCT 740070 24 100.0 37 ........................ ATTTTGGGTTGAAAAATAATTATATAATTAATAACTA 740131 24 100.0 43 ........................ GGCTGGATAAACTGCACGTGCACCGGTGTTTGGCTAGCGGGCA 740198 24 100.0 44 ........................ GCGGGAATTGGTGTGGAAACTCTATCACAATCCACCTTCTCCAG 740266 24 100.0 43 ........................ ATGGAATTCTTTCTATATACGCGACCTTTAGGATAACTATAAT 740333 24 100.0 40 ........................ GCTAGCTGCGAAATTTGTATCGTTAGCTCGTAAGGCAGAC 740397 24 100.0 42 ........................ CATTGACCTTAAACGTTACAACTCTCACGGGATCACCTCATA 740463 24 100.0 39 ........................ TTATTTTATCAGTAGGTACACCTCTGACTATTTTTAATT 740526 24 100.0 41 ........................ ACACTGTATGTTATGATATGAAAACCTGGAAGGAACTCGAT 740591 24 100.0 44 ........................ TTTTGATTTATTTATACTGTTTATTAACCTTAAGATTTTTTTCA 740659 24 100.0 40 ........................ AGGAATGTAAAATGTACCGCCCTAGGAAACACGAAACTCC 740723 24 100.0 44 ........................ TCGGAAGAGATAGTTAATTCAATAGTTGTTTTTTCAGTCTTGGT 740791 24 100.0 37 ........................ AACGGTAAAAACGCGTAAAACAACCTATTTTGGGTTG 740852 24 100.0 41 ........................ TTCTGCACTACTCCTAACCTTAGTTAATACGACACCTATTA 740917 24 100.0 43 ........................ AATTTAATTTCCAAAATTACAATTCCTAATGGAATAGCGGGAA 740984 24 100.0 40 ........................ TTAATTTCAACAAAGAAAGAGCCGAATTACTTAACGATCT 741048 24 100.0 42 ........................ TATACTGGAATGAACCCAATACTAACTTCTACATATGCACAA 741114 24 100.0 38 ........................ GCAGGGTTCGTAGATACTTAAAAGAGCTGTACGGGGAA 741176 24 100.0 41 ........................ TCCTCTGATGTTGGTGCTAGTTTTACTATCAGCGATGGCAA 741241 24 100.0 39 ........................ AATTTGCATCTTTATATAGAGAGTACAAGTTCTTTATCT 741304 24 100.0 40 ........................ TTTCCAGAACACGAATCTCGTCTTTTAGTTTATTTAATTT 741368 24 100.0 43 ........................ TAAATTGTATACATTTCACCTGCTAATTTATATATAACAACAT 741435 24 100.0 43 ........................ ATTACTGGATCTTTGAGTCCTATTATTCCTATTACTTTGTTAT 741502 24 100.0 42 ........................ ATGATCATACATCATGTCATAACTTTTCATGAGTTTCTACGC 741568 24 100.0 41 ........................ TTAGCAATAATTACGCCCGAGATCATAGGACTGGCTTATGG 741633 24 100.0 39 ........................ TCTGTTACGCCGAGTGCCGGTAACACTTGAGCCATTTGC 741696 24 100.0 39 ........................ CAGTTAATGTCGTTAAGTTCTAGGTTTAGCAAAAGTCGA 741759 24 100.0 39 ........................ TATATTAAGGAGATTCCTAATTCTGAATGCTAACTCTTT 741822 24 100.0 37 ........................ GGTCTAGCCGTAATTAATGGGAAAAATTGATATGACT 741883 24 100.0 40 ........................ TTTGTAAATTGTATTATATATCCATTCATATCTACAGATC 741947 24 100.0 40 ........................ GCTCCACCGCCTTTTACCATTCCCTGAATATGATAATAGT 742011 24 100.0 41 ........................ CTTTCTTTCTGCTTTTCGTACTAGGTTTTTCTTCTTTTTCT 742076 24 100.0 39 ........................ AAAGTTTCACCGAGTGGTCTATGGTTATTAATAAAATAT 742139 24 100.0 49 ........................ GAGTAAAATCCTAACTTTGAAAGGTAGGCGTCTAAAAAATTGTTGTCCA 742212 24 100.0 45 ........................ AAAAAAGACTTAATAGTTACAGCAAAAATGGTCAAAAAAATACAG 742281 24 100.0 41 ........................ ATACTTTTTAACGTTTTCATTTATCATGTTTCTATCACTAA 742346 24 100.0 42 ........................ CTCCTTTTTCTCCTATAGTAGGAATAGATAAACAACTTCGCT 742412 24 100.0 39 ........................ TTCGTACTGTCCTCTCAGCAAAGCCCTATATTTTTTCGT 742475 24 100.0 42 ........................ AAAGGAACACCAATTCCTATTCCTACAGCTGCAGCTGTGCCG 742541 24 100.0 41 ........................ TTATTGAATAAAACAGAGTACAAAATATTTAGTGGTGATAA 742606 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ================================================= ================== 93 24 100.0 41 GCTAATCTACTATAGAATTGAAAG # Left flank : TACTAATTTTAATTTCAATAATTTCCGGATTAGGATAGCGAAGTCGTAGAGTTTGGATTTTTAAGTTTTCTATAGCGGCTTTAGTTCCTTCCACTATGGGACTAGGAACTACTATAAGTAATTTATCCTCCTTTTGAGCCGAAGTCTCATTAAGAAGTCTTAGAAGATAAGTTTCATTAAATCCCAAAGTTACAAAGTATGACTTCATCATTATATATGGTAATATCATAAATAAATAATTTTTGATTACTTTCGAGGAACTCTAATTACAATTTTTGTTCCCTACTATTTCCGTTGTTTTCCTTTTTCCTTGTTTCGTTTTGGGTTAGGTTGTTATCCTAAATTCATTATCTTTATGAAGAATTCCTTAAGATCCCGGGAAAACCCGGGAATAGTAAAAAAGATAAGAAAGAGTAATATAATACTAATCGAAGAGTAGAGAAGAAAAACTTATAAGAAAGGGAGAAGAAAAGATCAAATAGAGGGTTAAAAAACCCTCA # Right flank : GTATTATGGCCTATGATTTTGACACACTTTCCTCAATTTTCCTTTCATAATCAAATTATTATATAAATTAATAAATTAAACGAGAAAACTCTTTAGTGAATTTACTGCACGTAATACGGGATATCTTTTTCCGTTGATGAGAAAAATTTAATACTTTATTTTTCGGATTTAGGGTATGATATTACTCTTAACACTTGGCTTTGATGAGAAGTTTCAATACCGTGCGTTAATGAGGCAAGGTAAGAGTATTGAAAAGGTCATTATTGTTGGGGGTTTTGAGGAAGAGAAGGCTAAGAAAGCGTTGGAATCCCTTACCAATTTCTTAAAAACAGTTAACGTTCCTTATGAGACTATTGAAATTGACCCTAGAGACTTTGAAAATATTGTTGAGAAAGTTGGCAAGGTTATTTTAACTAATGCAGGGAAGGATTTCATGGTTAACCTAAGCGGAGGGATGAGATTAATGATTTTAGCAGTATTTTCCGCCTTTTTATTGACTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //