Array 1 933-1560 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZIX01000022.1 Staphylococcus haemolyticus strain SNUC 123 contig022, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 933 36 100.0 30 .................................... ACGAATAACACAATATATAGTATTAACAGC 999 36 100.0 30 .................................... GTTAGCACCATTGTTTTTATGGGTAGCGCA 1065 36 100.0 30 .................................... TTATTGAGTTTTTTACAGACTTACAGGATA 1131 36 100.0 30 .................................... CTTGTTGTAACCACCGCCGATTGTTTTTGC 1197 36 100.0 30 .................................... TACCTGCTTGACTACCATCTAATCCAGAAT 1263 36 100.0 30 .................................... AATTTGCGAAACGATATTGTGACAATCAAT 1329 36 100.0 30 .................................... ACAGAAATATTTATGAAATACTTTTTAACT 1395 36 100.0 29 .................................... TTAGCATCATCATTCATCTTTTTAGTTAC 1460 35 94.4 30 .................-..........C....... GTTTTTTTAGGGGACATAGGGGGGTGACTG 1525 36 72.2 0 T................C......C.C..A.ATTTA | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 96.7 30 GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC # Left flank : CGATACAAATATAATTGTATTAACAGGATCATTACATTTTCTATCTGAAGAGTGGAAATACAATAACTATATTAGAGATGGGAAACAAAAAAACACATCTGAATTTCTAGAAGAATTAGAGTGGAACGCGCCACTTGATTTTGATAAGAAGGATCTAGAAGAAAGTTTGAACCGATTCATTTTAACTTATCAAGATAAATTAGAATTATATCCCATAATATCAAACTATCAAATAGCACAAATTATGTTATTTAATGCCATAGATATATATGTTGGGATTTCATATATGCAACATTGTAATCATAAATTTAAATTAAAAATCAAAAGTGAATTGCTGCCTAAAAGCATCAATAAATATTTAAATCAACAATTGCTGAATTAATTACTTTGCTATAATTAACTTAATAAATTATTATTATCTTAGTGAAGGAGTTTAGCTAACTTGTTCACTAAGATACCTTTTTTTGAACTAATTCTTTTAGCGAGTAATATTGCTAGAG # Right flank : AAATTAATGATTACTAAGTGCTGTTACTTGCTTACTTTTATTATCATGATCAATCAATTGATCAAAAGTATAGAAATATTTAAATTTAATAAAAATATTAGTTGACTAAGCATCCATGATAGCAATATAATTAATTTATAGAACAAGTTTAGCTAACTTGTACTTATACCTAAAATTGCAGAATCTACTAAAACAAGACTTTATGTCGTGTTTATCCCATTAATTTATTAATGGGATTTTTTCTTTTTAATTAGACAAATCGCCAACGATGATGACTATCGTTGGCGATTATTTTTGTTTAATGTCATTTAATTACACATTATCATCAGTAATTTGACCAATCCAATAACTAGCTGCAAATCCAATGATTAAAGTGATGATTGAAAGTGTCCACTCGATACCAGTTTGAGGAAGACCAGGGAATACAGCATATATGGAGCCAATTACGAATCCAGTTATTAATGCGAATGTGGTATAGAAGTGATGATGTAGGAAGTATT # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //