Array 1 27773-31704 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABTWK010000046.1 Acinetobacter baumannii strain KAB19 MRSN613266_contig00046, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 27773 30 100.0 30 .............................. CAGGGTCTTTAATCGGTTCGGCTTTACCGT 27833 30 100.0 30 .............................. ATCAACCTGTTTGTGATGCTCTTACTTTCT 27893 30 96.7 30 ............................A. TTACAGACCGTAAAAGCCCATTCACAAAAT 27953 30 100.0 30 .............................. TCTCTATTCGCGCAGGGTCCTGAGTAATTA 28013 30 100.0 30 .............................. ATACAAATGTTTTTGTATTTGATAAGTGGT 28073 30 100.0 30 .............................. CAATGCAGCAAGGTTTGGAGCTGAAATGTA 28133 30 93.3 30 ............................AC AACTTTATCTAGGCCAGAGTGTTCAAATAC 28193 30 100.0 30 .............................. GCTGATGGTAAACAACCATTAAAAAGAACT 28253 30 96.7 30 ............................A. ATTCTGCATCTTTCCTAAGAACAACTCTTT 28313 30 100.0 30 .............................. AAGCATTTAGGGTCCACCATCTTTCTTTGA 28373 30 93.3 30 ............................AC ATGCCTTCATCTTCATCGAGATACCAGTCT 28433 30 93.3 30 ............................CA AATGCAGAACCACCCCAAGATCAAACAATA 28493 30 93.3 30 ............................AC TAAGAAGAATACGTTCTACTACCCCTATTG 28553 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 28613 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 28673 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 28733 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 28793 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 28853 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 28913 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 28973 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 29033 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 29093 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 29153 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 29213 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 29273 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 29333 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 29393 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 29453 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 29513 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 29573 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 29633 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 29693 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 29753 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 29813 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 29873 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 29933 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 29993 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 30053 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 30113 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 30173 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 30233 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 30293 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 30353 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 30413 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 30473 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 30533 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 30593 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 30654 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 30714 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 30774 30 100.0 30 .............................. CAACTGTGTAACCAGATTTCGCTTTAAAAG 30834 30 96.7 30 ............................A. CAATGTAATGCTCAGGCGATGCCTTATCAT 30894 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 30954 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 31014 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 31074 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 31134 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 31195 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 31255 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 31315 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 31375 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 31435 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 31495 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 31555 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 31615 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 31675 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 66 30 96.0 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.49 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.43, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //