Array 1 546-334 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE383826.1 Microbacterium luticocti DSM 19459 H577DRAFT_scaffold00017.17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 545 29 96.6 32 ............................C GCCCAGAAGTGCGGCCAGTTGCCAACTCCCCA 484 29 96.6 32 ............................C GGAACAGCACGCGCTGCTGGCGGCATGCCCCG 423 29 100.0 32 ............................. TGCCGGTTCGAGCGTGTCCTCGTCGGGCGGGC 362 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTGCTCCCCGCGCGAGCGGGGATGATCCG # Left flank : CGGCACCTCATACGGACAGGACGAATGAGGATGGTCGTCCTCGTGCTCTCTGCCTGTCCGCCCGGCCTTCGCGGATATCTGACCCGCTGGCTGCTGGAGATCTCCGCGGGTGTCTTCGTCGGCTCGGTATCCACGCGCGTGCGTGAATTGATGTGGGAGCGCACGAAAGACATGACACGAACGGGCAGGGTGATCATGGTGCTCTCGGCGCGCAACGAGCAGCGGCTCAAGTCCTCGTACACGGACATCACTGGGAACCCGTCGATGTCGAGGGGATCACTCTGATGCTTCGCCCTCGCGACCGCGGGACGGTGGGGGCTGCCGCCGAGTCGCTCAAGCCTGCACCGTCCTCGGCATCGCCGAAGACTGGCTGGAGCAAGGCGGCTCGCTATCGTAAGCGTTGATGAGCGCCATCCGTGATCCTCTCGTGATGCGTACGCGCGTCGTGCAAAGTGATACGTGTAGACCGTGCCCGTAGACTAAACCCCAGATCAGGAAGG # Right flank : GCCCGGTCAAGTCCCGTGGGGTGGTGTCATTTTGGTTGCTTCCTGGGGGTGGTGGTCAGGCGGTGAGGTAGAGCTCGGGGCGTGCGGGTTCGGCGTGGTCGTGGAGGGTGTGGACGAGTTTGCGCATCGAGGTGTCGGAGAAGTAGCGGCGTTCCCCGTAGGACCATTCCTCGTGCTGCTCTTGCAGGACGGCGCCGATCAGGCGGGTCACGGAGTCTCGGTCGGGGAAGATCTGGACGACGTCGGCGCGGCGCTTGATCTCCCGGTTGAGGCGCTCGATCGGGTTGTTCGACCACACCTTCTGCCAGTGCTCGCGCGGTAGCGGTGCGAACGC # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 38110-36891 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE383827.1 Microbacterium luticocti DSM 19459 H577DRAFT_scaffold00019.19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================ ================== 38109 29 96.6 32 ............................T GTGTACGAGTCCGTGCACTTGATCCAGAACTC 38048 29 96.6 32 ............................G TCTACCAACTGGCGCGGTTAGTGTCAAGTGAC 37987 29 100.0 32 ............................. TCTTCAGAGATGCGGACACCGAGCCCCGGGTT 37926 29 100.0 32 ............................. CCCGACATGGATAGCGTGTCTCAAGTTGAGAT 37865 29 100.0 32 ............................. CAGGCCGGCGCGTTGTTCCCGTACGGGTTCGT 37804 28 93.1 32 .....-......................T GAGGCCGAGGTGCGGATCGTGCGCGACCTGCT 37744 29 96.6 32 ............................G GTCACCGACTCCCGGGGCAGAACCACCACCAA 37683 29 93.1 32 A..............C............. TACGTGCTCGCCCAGCTTCGGCAGGCCACCAA 37622 29 100.0 64 ............................. CGCACCCGCTGAGGTCGATCTCCCCTGTGTCCAGGCGACTCGCGGCGAACGGCTGCCGTTGGTG 37529 29 96.6 32 ............................G ACGGCGCGGACGAGGAAGTCGAACTTCGCGAC 37468 29 96.6 32 ............................G AACGGCGGATGCTTTTTCTAGGCCCCAGCTGC 37407 29 96.6 32 ............................G GTGTGGTTCTACCAGGACCGCGAAGACACCGA 37346 29 93.1 32 ............T...............G ATGGGCATGGGCACCAATGTCCAGGGGCGGGC 37285 29 96.6 32 ......................G...... GACGACGCGACGGGCGCGTAATCTGCCTCCGG 37224 29 89.7 32 A.......T...................G GACATCGGCGAAGTCCTCTTCAACGACGCCCT 37163 29 100.0 31 ............................. GACCGCGCTTGAACAGGCGGTGGGGGAGACA 37103 29 96.6 32 ....A........................ TTAACGGGGACGACGCCGGCCGAGATCTCGGT 37042 29 89.7 32 ........G....C..............A CGGAAACCCTTCCGGATGACCACGAAGGCGAA 36981 29 82.8 33 ...........AA....A.......C..A ACCGAAGCGAGCGCAGCGAGTGAGGATATGCCC 36919 29 89.7 0 ......................A.GC... | ========== ====== ====== ====== ============================= ================================================================ ================== 20 29 95.2 34 GTGCTCCCCGCGCGAGCGGGGATGATCCC # Left flank : ACCTGCTCGATACGCCACACCGTCTTGGTGTGCTCCCCGCGCGAGCGGGGATGATCCGTGTCCAGGTCGATCATCCAGAAGTGGGAGGCCGTGCTCCCCGCGCGAGCGGGGATGATCCCAGAAATGGTTCGACACCATCGGCGGGGTGGACGTGCTCCCCGCGCGAGCGGGGATGATCCCGGCCGCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : CTATTCAGGTTCGTTGTTCAGGTTCGTAGCCTGGCGGGCCGCGGCGCGTCCCTCACGCAACCTCAGCCGTCGAGCGCCGCCAGCGCCGCCTCGAGTGCGACCCAGGCGAGCATCGCGCACTTGACGCGAGCCGTGTACTTCGACACCCCGGTCAGGGCCGCGGCATCCTCGTACACGTCCTCGTCCAGCTCCATCGTGCCGCGGGACCGCAGCGCGGTGCGGAAACCGTCGATGAGGGCGGATGCCTCGTTCCTCGGCAGCGGGGCGCGTTCCGTCACGAGCTGCGACAGCATCGAGGCCGACGCCTGCGAGATCGAGCAGCCCTCGCCCTCCCAGCTCACGTCGCGGATGCGGTCGCCGTCCACGCGCACACGCAGCGTGATCTCGTCGCCGCACACCGGATTGCGCTCGTGGTGGTCGGCGGAGAGACCTTCGGCCGGCGCCAACCCGCTGCCCACCCGTCGACGCGCATGGTCGAGGATCAGCTCCTGGTACAGCTG # Questionable array : NO Score: 5.29 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:-0.08, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [35.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 39374-38430 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE383827.1 Microbacterium luticocti DSM 19459 H577DRAFT_scaffold00019.19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 39373 29 100.0 32 ............................. TGGCCCTCGTCCATCGACACCCCGAACCGGGT 39312 29 96.6 32 ............................T AGTAGTACGTTCGTTCGATCCGAGAGAGGTTC 39251 29 96.6 32 ............................G TACGAGGACCGGGGCGACGATTCCCGGCTGTG 39190 29 100.0 32 ............................. CAGGCCGCGCGGACGGCGCGCCACTCGGCCAA 39129 29 100.0 32 ............................. AACGTCACGGACGCCGGCCTCCCCTCATGCCA 39068 29 100.0 32 ............................. ATCGTGCTCCGCGAGGTCACGCAAGCGGTGAC 39007 29 96.6 32 ....C........................ GGAGCATCACCACCGGCATCTACGTGCACCAG 38946 29 96.6 32 .....T....................... GCCGCCAAGGTCGCCCGCACCCTGTGGGGAGA 38885 29 96.6 32 ............................G TTGAGACACCGCCCACGCCGGGTGACCATGAC 38824 29 100.0 32 ............................. GTCATCGGTGGTGTGGATGTGCGCGAAGCAGG 38763 29 96.6 32 ............................G GAACCGATCGAGCCCGACGAGCACGACGGACC 38702 29 100.0 32 ............................. CGGCCAGACGGGAAACTGATGGTGGGGAATGA 38641 29 100.0 32 ............................. GGCACCTGCTCGATACGCCACACCGTCTTGGT 38580 29 96.6 32 ............................G TGTCCAGGTCGATCATCCAGAAGTGGGAGGCC 38519 29 100.0 32 ............................. AGAAATGGTTCGACACCATCGGCGGGGTGGAC 38458 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 16 29 98.5 32 GTGCTCCCCGCGCGAGCGGGGATGATCCC # Left flank : CCGGAT # Right flank : GGCCGCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTCCCCGCGCGAGCGGGGATGATCCTGTGTACGAGTCCGTGCACTTGATCCAGAACTCGTGCTCCCCGCGCGAGCGGGGATGATCCGTCTACCAACTGGCGCGGTTAGTGTCAAGTGACGTGCTCCCCGCGCGAGCGGGGATGATCCCTCTTCAGAGATGCGGACACCGAGCCCCGG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-3.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //