Array 1 2254-795 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGZJ01000003.1 Bifidobacterium pullorum strain LMG 21816 Contig03, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 2253 36 100.0 36 .................................... GTGAAGCTACATGCAGTTTCGAGGCAATCGATTCTT 2181 36 100.0 35 .................................... AGCAATGTGTTTACTGTCGGCCCTTGGCGCGCGGT 2110 36 100.0 36 .................................... AATACCGTGCGCGAACTGTATAGCTACGGCACTAAA 2038 36 100.0 35 .................................... TGGCGCGTCCACATGGATAACGACCTGAACGACAT 1967 36 100.0 38 .................................... GCGATGGAAACGCCGGGGGAGTACACCGAAACCCTCGG 1893 36 100.0 35 .................................... TCGTCCGGCTGCAACGTCTCCCAATCCTGCACGGG 1822 36 100.0 37 .................................... GAAAAGAGCCGCCACACGATGTGACGGCTCTGATAAA 1749 36 100.0 35 .................................... ATTTGGGTGATCTGATCGACCATAGGTTTAACGCT 1678 36 100.0 34 .................................... GCTCCGTTGGCCGACCGTGTGAAGGCCATCGAGG 1608 36 100.0 35 .................................... CCGATGACGGTCACGGGCAGATACCCACTGGCGGT T [1598] 1536 36 100.0 34 .................................... AAAGACGATACCCAAGGATGAGGGTACGAGCGAC 1466 36 100.0 33 .................................... TATAGAGACATCCCGCAAGGGACACCACCACCA 1397 36 100.0 33 .................................... AACGGCGATCTGGCCTTGCACCGTGAGATTGAT 1328 35 91.7 39 .......................T-...G....... GACCCGCTGAAGGATCCGGGCATCGACCAGTCGCTGCTC 1254 36 83.3 35 .........T.C..T........CT...G....... GTCATCCGCCGGTCAAGGAGGATGGACTGCATAGT 1183 36 83.3 37 ...........C..T.......GCT...G....... ATGCTGGATGGCAACGAACCCGACCGCGACGCCGAAT 1110 36 86.1 35 ...........C..T........C....G..A.... CCGGTGTGGATCGAGCTGCTGCCGCAGTCACTGTT 1039 36 86.1 36 ...........C..T........C....G......G GAGCTCAACGGCGGCCAGGGCCTGATACCGAACCAA A [1030] 966 35 75.0 31 .C.......T.C..T........CT...G...-..T CGTCCCGCGCACGAACATGACCGGCCTCGCT 900 36 80.6 35 .........T.C..T.......GC....G..A.... TCAAGCCGTTGCACTCCATGGCGGATCAGACGCGG 829 35 72.2 0 ......G.A..G..T.T..-..GCT...G....... | ========== ====== ====== ====== ==================================== ======================================= ================== 21 36 93.3 35 ATTGCGAAGCTTTACGCTTCGCAACTTCATTGAGGA # Left flank : TGCTGATTTGCTTGCTGGGAACGGGAGCGACTGCACGTGGGGACATGACGTTCCTCGATAGACAGTCGTATCAGGATGTGGCCATTCCGACGATTATCTGAGTAGCTGTTCGGATGGGAAGTGGGATGGCGAGATGTCATACCATCGTGATGCTTGACAAGTGAATAGTGGATAATCGGTAGTAGATGGGGTGGACAGCAGAGCCTGCACATGGGATGCGGAGATTACCCGGTTCCTGCGTTGTTTCAATGTTCGTCTCACTCTGGCATTCGCTCGCGCGCGTGCCAACCATGGCCACCATCTCGCCGAAAAGTGTTTCGCGTGCTTATGCTGTTGCGAGAGCTGAATCATCCGGGAGCGGGTGCCGAAGCTCTCGCAGCAGACGTAGGTGGGCGGAAGCCATGTCCGCCGTACAATGTGCATCAATGATGCCTGCTACAACGAGGTCTCTCGCAACTCGCCGTTTTGCCCATGTGGTTTCAACTGCTTAAACTATGGCT # Right flank : AAACGTGTATCGTTTGATGCATGACGACGATGAAGCAGGTGGCGCAGAAGGCGGGAGTCTCGGTATCCACGGTGTCGTTGGTGCTGAACCATCGCGACGCAGGCCGTGTGAAAGCCGAAATCGCCGAACGGGTGCGGCAAACCGCGGAGGAGCTGGGGTACCGGCCCAATCCGCTGGCCAGCAGCCTGCGTACCAGCAGGACCCATATCCTGGGCTTCATCAGCGAGGAGGTCGCCACAACCCCGTACGCCGGCGGCATCATCCTGGGCGCGCAGGACGCGGCCAGCCGATTGGGGTACATCATGGATAACGCCCGATTTTTTGCGCACTTTGTGATTCGGGCTTTCCGGAAGGGAACATGGCCCGTGCCGGGTACGATTTTCAGTCGCCAGACATGAAAAACGCGATTGGAAAAGAGGCACGGGCCATGTCCAAGGAAATCATACAGTTCGACCAGGCCATGTTCGAGACCAAGCTCGACGCCATGGTGCGCGACAAGG # Questionable array : NO Score: 2.92 # Score Detail : 1:0, 2:0, 3:0, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCGAAGCTTTACGCTTCGCAACTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.50,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [49-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //