Array 1 1735441-1734925 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084433.1 Edwardsiella piscicida strain S07-534 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1735440 28 100.0 33 ............................ CGTGAGAAGTTGCAACGGCGTTACGATCGCGGC 1735379 28 100.0 33 ............................ CGCTGATTCTCTCGATTACATCAAAACGCTGCC 1735318 28 100.0 33 ............................ TGCTGACCGAAGCCATTGCTAAGATGCAAGCTG 1735257 28 100.0 33 ............................ TCGTCACCATCGAGGATGCCCTGGCCGGTGGCT 1735196 28 100.0 33 ............................ TAACAACACGGTAATCGACGTCAACGGTCGTCA 1735135 28 96.4 33 ..C......................... CCCGGCATGGTCTGGCGGCTTGTCTATTGTACT 1735074 28 96.4 33 ..C......................... CGAGGGAGCTACCATCGAGAGCAGCCGTTAGGC 1735013 28 96.4 33 ..C......................... TACGGATTATCCCGCCTATCTGGTAGCTGATAT 1734952 28 96.4 0 ..C......................... | ========== ====== ====== ====== ============================ ================================= ================== 9 28 98.4 33 GTTTTCCCCACGCCTGTGGGGGTGTTTC # Left flank : GAGGCGAAGCGTTTCCCAATGCCAAGAAAATCATGTAGAGCGCGAGCGTTACAAAGTAGAACGGATTCATTGGAGATAGTACCGTTGAAAACGGGGATGAGTTGACTGGTCATTTTTTGCGTCCTAGTAGATTGTTGATTACCCCTGTTGATAAGGGTGGTCGGGTACTTCAACACCGCTACTAGACGGCCTGTAGTTTTTCCCAATAAGTTGGGTGTTATATGTACTACACGCTACCCGACCATAATCTATGGACGTAAAAAACCGCATATCTGTCGGGTGCGGAGCTCCGCTAGTAGACGGTGTGTTGAGCACCTGAGCGGACTATACCCCCGACGCCGCGGGTAAAACCAATTCCGATTTATGATACTTTACTTACAAATCATAGGAATTCAATGAATCATTCTAGCCTGACCATACAGAGCCCCATCTGGCTATTCGACCAGTAAACCAACCACAATCTGTAGCTGGTTTAGTATGTTCTTTAACAATATAATGGG # Right flank : TGGTTACACTGGGGGTATGTACAGAAAGCTGATGAGTCATTTTTCTGTGTCCTACGTATATGTTCAAATTTACCCTGTGTTCGGCAGGGAGGCCGGGTACTTGAACACCGTAGAAAGGTCGGCCAGCAGTTTTTCCCTTGCGGGTGTTGTATGGTCTGCTCGCTACCCGGCCATATCTGAAAGTATGGACACAAAAAAACCGCATGTCTGACGGGTGCGGAGGCCGCGTTGAAAGGTGTTTTCAGCACCTGAGCGGACTATACCCCCCGACGCCACGGGTAAAACCAATTCCGTTTTATGATACTTTACTTACAAATCATAGGAATGCAATAACCATCCCCTTGGAACAGTGAGTGGCATATATTTCCTAATTCTCTTAAAAACCGCCCATTCCAGGACGCCAATCCCAGCAACAGATTTTGCCGCTGCCACTACTCTCTAGCGCTCACAATTCCGATGGGCAAGAACTTGCGAAAACATAACAATATTGTTATGTTTCA # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCACGCCTGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2747161-2746706 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084433.1 Edwardsiella piscicida strain S07-534 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2747160 28 100.0 33 ............................ CCCTAGATGGCTCTTTTACTTTGTTGATGGCCT 2747099 28 100.0 33 ............................ TCCATGATGGCCGCTTTCAGCTCACTCCAGTGG 2747038 28 100.0 33 ............................ CTTCATTATTCCTGGCGACTTCAAAAAGAACTC 2746977 28 100.0 33 ............................ CGCTGGCAGACAGAGATGGCCTTAGCCCTTGGA 2746916 28 100.0 33 ............................ CCATCCCGCCGATCGTGGTGGCCCGACGAATTG 2746855 28 100.0 33 ............................ TTCCTCAGTCATTCCTGGGAAGTTGCTTATCAC 2746794 28 100.0 33 ............................ CTCTTTCCCGTGGTCTCGGTTGTTATCTTCGAC 2746733 28 89.3 0 .........................GGA | ========== ====== ====== ====== ============================ ================================= ================== 8 28 98.7 33 GTCTTCCCCACGTCCGTGGGGGTGTTTC # Left flank : GAATCTCTGTATCGATCTTGCCTTCTCCCTGACGCGTGAGATGGCGGGGCGTTATGAGAAGGCTCTGGTTTCATCTCGTTTTCGAGAGCGGGTGATAGAACTGAATTTGCTCGCGAGTGTAGCCAGAGATATACCACAGCTACTTGGAGGGGCAAATATTGATGCTGATAGTTCTCGCTAACGATTTACCTCCAGCAGTTCGAGGACGAATGAAACTTTGGTTTATTGAACCGCGGCCAAATACCTTCGTTTCCGGTATCAAGGATTCGGTTGCTGACACCGTGATCGAATACCTTTATCAACACTGCTCACCGGCAGCGGGTGTGGTGATATTTAAAAGCATTGCTAGAGCACCGGGGTATCAGATCCATACCATAGGATCACCGACCAAGACGCTCTGTGAGATAAATGGCCTGCAGTTGGTGGTAGAGAAGCGACTCAACCAGTAAGTCAACCACAATATGTAGTTGGTTTAGTATGCTCTTTAACAATATAATGGG # Right flank : CTGACCCCAATACCTTTCTTGCCTCATCTCGTTTAGTGCTTGCTTCCGCAAGTGTGATGTCCGGGTAGGTTCCGAATGAGAGCTTTTTCTCTTTGCCGGCAAATCGATATTTCATCCGCCAGTATTTTGAACCGTTAGGGTTGACCTGGAGATACAGTCCACCACCGTCAGCGAGTTTATAGGCTTTGTCTCTGGGCTTTGCAGTCTCGACCTGACGCGCATTTAAGGTCGTTTTTGGGGGCCTCATTTTTCATTGAACAGGATAAGCCCCCACTAAGGCCCCCAAACGTTTATAGATTCACGTTGAGATGGGTAGATATCCGTTGACGTCGCATAGCCAGAAAAGAGGGTTTATCACTGATTATAAGAGGGTTTTATTGAGTTTGGTCGATGTCAGGAGAGGGGGGATGGCGTTCCCTGCATACGCCGAAGTTGATATGCAGGGATTTGATATAATTGTGTTTTTATGTGTTCGTTAAACTTTTTACCCGCAATTTTAC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGTCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //