Array 1 62507-62355 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CKRA01000001.1 Streptococcus pneumoniae strain SMRU972, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence             	Insertion/Deletion
==========	======	======	======	================================	============================	==================
     62506	    32	 100.0	    28	................................	TTACCTAAAAGATGATGGCTCTATGGTT	
     62446	    32	  96.9	    28	.....C..........................	CTTCCTAAATAGTAACGGTTCTATGTCA	
     62386	    32	  93.8	     0	...........T..G.................	|                           	
==========	======	======	======	================================	============================	==================
         3	    32	  96.9	    28	ACTGGTTGGGTGAAAGATGGAGATACTTGGTA	                            	       

# Left flank :   AAGTTTTGGCAGATGAGAACCAAGCAGGACCAGTCGGAATTGCCAACCCGAAAGGACTTGAGTGGACTGAAAAAGGCTTGAAATTAAATGCCCTTACAGCTACTGTTCTTCGAGTCTCTCAAAATGGAACTAGCCATGAGTCAACTGCAGAAGAGAAACCAGACTCAAGCCCTTCTAAGCCTGAACATCAAAATGAAGCTTCTCACCCTGCACATCAAGATCCAGCTCCACAAGCTAAACCTGATTCTACTAAACCATCTGCAACAGTGGCTGATGCAGAAAATAAACCTAGCCAAGCTACAACTGGTTCACAAGCTTCACAACCACATAAGGACAATAATACTCAATCACTTCCATCTACTTCTACACAAGCTATTGTAACTTCCTACACCCCAGCTTATACAAATAAGAAATCGGAAACTCCAAATCAGACAACTAAAGCTAGTTGGAAACAAGACAATGGCATCTGGTATTTCCATAAAGCAGACGGTTCTCTAGCT
# Right flank :  CTATCTTGAGCCATCAGGAGCTATGAAAGAAAATCAATGGTTTGAAGTTTCTGGCAAATGGTACTATGTTGATTCATCAGGTAAACTTGCAGTTAATACAAGAGTTGAAGGCTATTTGGTCAATGAAAACGGTGAATGGGTTAGCTAAAACTGCTACTGTATAACCTTTGCATAGCTAGATATAACTAATCCAAAGACAGGAAACTCAACGATCACAAACTCCTGTTTGCAGGAATTAGTCTCCTTGCCCTTCTAGGTCTCGGGTTCTTGCTAAAAAACAAAAAAGAGAACTAAACTAGCCCTCCTATAGAAAAATCCTCCTAGACTTAATGCTTGGGGGATTGATTTTTGTACAATATTTGTTGTCCTAATAAACTTGATTAGATTTTTTATTAAGCCTCTTTCATAGCAAAATAAGCTCGTACTTTTGGAGCAACTTGTGTTCCGAAGAGTTCAATAGCTCTCAGGACTTGTTCATGAGGCATGGAACCAAGCGGTAG

# Questionable array : NO	 Score: 2.52
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ACTGGTTGGGTGAAAGATGGAGATACTTGGTA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:56.25%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [2-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.41   Confidence: MEDIUM] 

# Array family : NA
//