Array 1 41985-43301 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQML01000010.1 Corynebacterium sp. 50A NODE_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 41985 36 100.0 28 .................................... ATAGCGCTTGTACGGCCTCAGACGTAGT 42049 36 100.0 28 .................................... CGCCTCCGACGGTGGCGTGATGTTCAGC 42113 36 100.0 28 .................................... CTATGGGGTGTGACCGTGAAGGAGTTAC 42177 36 100.0 28 .................................... GGCTAGTCTCACTGTCTCTGCTTGTTCT 42241 36 100.0 28 .................................... ATTGGGCTTTGTTGCCTCCCGCACCCGG 42305 36 100.0 28 .................................... CGCCAACATCCAACCCCTGCAAGCCCGC 42369 36 100.0 28 .................................... GGGATCGACATAGGGCCGCGATGGACCG 42433 36 100.0 28 .................................... ACCAGACACCACTCGAGCAGCACCTCCG 42497 36 100.0 29 .................................... TACTACTTCCGAGGCCGTACAAGCGCTCA 42562 36 100.0 28 .................................... TCGCGGCGGTGCACAGCCCAGCGCACCC 42626 36 100.0 28 .................................... ATAGCCAACGTCTCACGTGGCGAGACAA 42690 36 100.0 28 .................................... CTACATCTAGTAGGGCGTCGAGCGTGGG 42754 36 100.0 28 .................................... ACTGTAGCGGGGCTCACGCACCAAGCAC 42818 36 100.0 28 .................................... GTCATCGGGCTGGGCGAATGCCGATCCA 42882 36 100.0 28 .................................... ATCCCAGCCGTAGAACTTCCACTCATGG 42946 36 100.0 28 .................................... TTAGACGGGATACGGTGCTTCGCGCGGG 43010 36 100.0 28 .................................... GGTCGAGGACGTGCACGCTGGGGCGGCG 43074 36 100.0 28 .................................... TGGGTGTGGGAGTGTCCACCGGCGCCGC 43138 36 100.0 28 .................................... AGCGGCGTCAGAGGTGTATTCCGGAGAG 43202 36 100.0 28 .................................... CACTGCAGCGTGGGATACGGCCGAGGGG 43266 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 21 36 100.0 28 GAAGTCTATCAGGGGTATATCGAACTGAACCCCAGC # Left flank : CATTCAACAGCAATGGCCAGAGTGTATCGACGGTCTTTCAAGACTTTGCACAGCATTTTGGTTTGTACGTCGAAGGAACAGTGGATCGGCTACAAGTCCCGCGTTGGGAAGGGCAGCTCAGTGCCAGCGAAGGACAGTGAACCGGTGTGGTGCGTCGTGATGTTTGACCTTCCGGTGAAGACCAAAAACCAGCGTAGAGAAGCTAATCGCTTCCGCAACCGGTTGTTCGACCTTGGGTTTTGCCGCGCCCAATTCAGCGTCTACGTTCAGTATTTCCCACTGGCGGCGCGTCTCAGCACGATAGTCAAACAGGTGAAAGGCGAACTTCCCGCAGGCGGAGAAGTGCGTATTTTGTCCGTGACGGACCAGCAGTGGGCAAAGGCGATCCGTTTTTCGAACCACAAGGAACAAGCGGTCGAAGAAATCCCCTCTCAACTAACAATTTTTTAAAAGCGCATGCCGAAAAAGACCCAGTTCAGGCCCTGTTTCTGGGCCTCACT # Right flank : CGAAAATGGGCATGGTGGCGGTCTCGGTTAAAGCCTATGGCGCTGCATCACGCTTAACGGCAGTACCGTTTTCCACGTCCTGTGCTGCGATGATCCTACAACCACAAGCCTGTGGCTTTCTGCAGGATCACCGCATCGCGACCTACCGCGTCGCCTCCTCCAACAGGTACAGCACGTGCTCATAGCTCCGCCCAGTGATTTGCTCCATGCCCAGCTCGCAGGTGCGGTTGGAGGACACATAGGCGTCCACGCGCCCATTGGCTTCGGCCTCGGCCAGCCCGGCGCGCTCGTCGCGGGTGGCGGCGTCGAGAAGCTCGGGGTGGAGCATGCCGCGGTCGCCGGCGGTGCCGCAGCAGCCGGCGCCGCGGGGCACGAAGGCCTCCTCGGCGGCGAAACTGGCGACGCGCACGAGGGTGTCGCTGAGTTCCATGTGGGCCAGCGAGCAGTTCGGGTGCACGGCCACCCGCCCAAGGCGGCGGGTGGGTTCAAGGTGCTCGATC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGTCTATCAGGGGTATATCGAACTGAACCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA // Array 1 60026-62066 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQML01000005.1 Corynebacterium sp. 50A NODE_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 60026 28 100.0 33 ............................ CTGTCGATGAACTGGTGGATTACGTAGTTTCCA 60087 28 100.0 33 ............................ TTGTCCCGTTGTCTTGAAACGTCACGCCGCTGC 60148 28 100.0 33 ............................ TCCGGGCAATTTCGGATTCACCGTAGCCCCCGT 60209 28 100.0 33 ............................ TGCCTCATCGAGGTATACGGTATCGCCAGATAG 60270 28 100.0 33 ............................ CTCACGCTCTTCATCTTCAAGAGGGCGCTTCAT 60331 28 100.0 33 ............................ GATGCTGCCCCTCCCACACACACGCGGGAGGGA 60392 28 100.0 33 ............................ GGCTAGAGGGCGCGCCATCCGGCCCGTAGTGTG 60453 28 100.0 33 ............................ GCGATCGAGGCCGTGGGGACCGGCTCGTACTGG 60514 28 100.0 33 ............................ CATTCATGCGATAGGCGTAGAGGGCGATGCCTT 60575 28 100.0 33 ............................ GTGGGATAGAGGCGCGATCGGTCCGGACGATAT 60636 28 100.0 33 ............................ CCGTGAGCGGCTGGGCGTGAAGCCCGATGCGGA 60697 28 100.0 33 ............................ GCTTACGCTTGAGATAGATGGGCCTCCAAGGAA 60758 28 100.0 33 ............................ TAGCTAGATCGTCGATAGGAATACCTGCGGTGT 60819 28 100.0 33 ............................ GAGCAAGCCCAAGAGATTCAAGCGCGTGTTTTT 60880 28 100.0 33 ............................ CTGCCCGATAGCGACGGCCGTAGATCAGTGGGG 60941 28 100.0 33 ............................ TGTGGAGCACCGGCTAGGGGGCGGGGATGATGC 61002 28 100.0 33 ............................ TCCCGAGCCATCTTGAGGGTGCAAGATGGCCGG 61063 28 100.0 33 ............................ CTGGGCATGCAATGTGTGCTATTTTCCCAGCTA 61124 28 100.0 33 ............................ CTCGACTATGAGGAATACGAATACGGCTTCCTG 61185 28 100.0 33 ............................ TTTCGACATGGACGCGTTCCGCCGCCGTGTCGA 61246 28 100.0 34 ............................ ATGCGCCATAGACCGCGTCGGCGTTTTCCTCGAC 61308 28 100.0 33 ............................ GTCCCTGAGCTGCTCTTTTGTCCCCTTGAAGGC 61369 28 100.0 33 ............................ CAGCCTTAGCCATCTGCGCCGCACCATCCGCGC 61430 28 100.0 33 ............................ GCCCGGATTGCCGGGAATACCGGTCTCTTCGCC 61491 28 100.0 33 ............................ TCAGGTGTACGACCAGTTTTCCGGACAGCTCAG 61552 28 100.0 33 ............................ GGAAGTGGTGAACGATGGCGCAGGTATATCGCG 61613 28 100.0 32 ............................ CCATCGCCAGCATGAGCTACGAGTACGCGGTA 61673 28 92.9 33 CG.......................... CTACTCGCCACAAGCCTCGCCGAAAAAGGACAC 61734 28 100.0 33 ............................ TGTGGATACCCTCTGGGGCGCCGTCCACGTCGA 61795 28 100.0 33 ............................ GTCTGACCTGAACAAAGATGACTTTCAGAAGAA 61856 28 100.0 33 ............................ CGTTGCTCGCAGCGGATGCAAACCCTCTATTGG 61917 28 100.0 33 ............................ TTGTGCGGCGACGGCCTGCGATTCGACCGCATA 61978 28 100.0 33 ............................ GAACTATCGAAAAAGGTCCAGCAGGCCGAAGAT 62039 28 92.9 0 ..........................TG | ========== ====== ====== ====== ============================ ================================== ================== 34 28 99.6 33 GTTTTTCCCGCACGCGCGGGAGTGGACC # Left flank : TTTTAGATGGCGGTAAGACAGAGCTATCTGGAGGGTGGCTTGCCGCCAATGGCATCGTATTCAAACGTATCCAGGACGCCCCGCCTGTCAGCGTTGAGATGATGCTTCACGCTAGTAAAGGATGGCAGACCTCCCCAGAGCTTGGAGCATCTGACCATATTCTCGACCGGCTCTCGGATACAGCGCCCGACACGGTAAGAGTAGAAGAATACTTACCTATTGCCGTGGGCATAGCCGTGTCAGGGCGTCCCTTGGCCCAACACGGAGTGGCGCATCTCAAAGGCCGAAAGAGGTTTCTTCCGCGCCCGACATATCCAGTAAGTTTATGGACTCTAGAGGTTCTATCGAGGAGACACCGTGGTTCTGGTCTGTTGGCGGAGGAGGTGACGCGCGGGAAATTTAAGACTGTTGCTCCACCGATCGTAGTTTAGTTCGTTCAAGGCGAATAGAAGTTGAATCTATACGCCGTGTTTGCTCGCTAAACCTGCTGTTCGCAGAGT # Right flank : GCAAGCTCCTGTGTTTACCTAGCAATCCAGTCGAGTTTGCCGAGGTCACCAAAAAATGTGACCCATTGTGGAGCGTGAGGGGCATCGCAGCGCTATGTGTCCATCTGTCACGATTGTGATCAGCTGTCACCTCGTTGAAAGCATGCATGAAGCATCGTTTCCTGAAGCGGTTGTGCCTTGGCAGCGGTGCTGATTTGTCCGCTGTAGCTTGTGCGCCTGTGACAGGAATCGGTTGCTGGGCACTGAAGACTCTTTCTTACTGTGGTCGGGATGCATATGGGCGCCATCAATTACCGACCTAGATCTGAATACCACTTATCTAGCGATGTCCCGATCCAGTTGAGTAGTTTTTCCAGAGCGTCTTAGGTGGAAACTTGACCGCTCCTGCGTTAACGAGTCCGTGGTCGTAGTGATACTTCGTTTGCGCTTCAGCCTTGAGTGCGGCGGGTGCCGTTTTCAGAAGTACTCGAATGGGCGGTAGAAGACATAGATGCGGCTCT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCCCGCACGCGCGGGAGTGGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-11.00,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //