Array 1 1617371-1618924 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007203.1 Nodularia spumigena CCY9414 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 1617371 36 100.0 38 .................................... CTTTCTACGCTGGCTTTTGTTCGCCCGCTTGTGCGAGA 1617445 36 100.0 36 .................................... TTGCACTGCAATCTTGCAGTTTGCCATTAAGAGAGG 1617517 36 100.0 35 .................................... TCAGAAGATCGGTTCTACAATCTAGAGGAAATTTC 1617588 36 100.0 36 .................................... CATTGGTTTCATGTTCGGAGCAAAAATGGATTTTTA 1617660 36 100.0 39 .................................... TAATTATAGCAGATGCGCGAATTCAACTTCGCGTAGATT 1617735 36 100.0 35 .................................... CAGGCTATGTTCTTAGCGTTACTTATTGCCTTCAG 1617806 36 100.0 38 .................................... CATAAAAAGGTCATCGTCATCGTATGCCATGAGATGGT 1617880 36 100.0 29 .................................... GCAGTCGCACAGGTGCTTGCAGATGAGGG 1617945 36 97.2 37 ........................A........... TGGCGGGTGCAATTCTGGCAGGCCTTCAGCTTGTCCA 1618018 36 100.0 37 .................................... ACCAAATTCAAAGACACGTAGAAGGGACCGATCTTTC 1618091 36 100.0 36 .................................... TTGATGTACGCATTATTCGTACAACTAAATCAAAAC 1618163 36 100.0 39 .................................... TAAAGCCCACATCGTGAAGGTGGGTGAGGTAATGCCAAG 1618238 36 100.0 37 .................................... ACGTTTTGTCCTCACCAGGGCAAAGGGTTCAATTAAA 1618311 36 100.0 39 .................................... GAAGAACAGCCGATGTCCACCTGGGCGGCGGTTGGATTA 1618386 36 100.0 31 .................................... TTATGGAAGATTTATATAATAGTCTCCTTGA 1618453 36 100.0 35 .................................... GCGGCTGTTGTTCGCTCAACACCTCTTACACGGGC 1618524 36 100.0 41 .................................... TCCGCTTTGAGTTTGGCTTTCGTCCCGACAGCCATTGTGAT 1618601 36 100.0 33 .................................... TCAGAGAATTCAATTAAATGAGTGCCTAAAAGA 1618670 36 100.0 37 .................................... CAAGAGCTCCTTTATAGTGAAGCGGCCAAGTTGGGGA 1618743 36 100.0 32 .................................... TAGTCGCTCAAGTTGAGCGCCCGGCCTAACTC 1618811 36 100.0 42 .................................... CCTGGTGGTAAACTTGCAACTAGTATTTTTGCTACTATTAAA 1618889 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 22 36 99.9 36 GTTTCCATCCCCGTTAGGGGAAGAGGTTATGGAAAG # Left flank : TATCCAAACCAGCAAAATCCCAGCTTGAAGATAATAAGTAGCTTTTTCAATCATGTCTCCAAAAGTTTGACCAGGAGAAATAATTTCGATAACTAATTCTGGGATAACAGGACAAGCTTCATCTTTAAGCCAGTCAGCAGGAAGACGGTTATAGGAAATATATGTTAAATCAGGGACGGGTAGCCAATTTTCTTGATTTCTTGTTAATTTTATCCCCCATTCCACTACAACGCGACCTTTTTCTTGCGCCCATGTGGATAATAGGATAAATAATGCTCCTGTGGTTGCGCCATGAAAAAATTTAGGAGACATTTGCTCATTTTTATATTTCGGTACAGCTTCACCGTTAACAAACTCATAAGCAAGTTCACTTTCGGGAAGTGCAAGAAATTCTTCGAGAGTGAGTTTGGTTTTTAGTTGAGTCATGGTTAGTTTTGGTGGGTTCAATATTCCCGACTTCTATGATAACTGAAGTTCGGTTTAGACCCGGATTTCTCACT # Right flank : GAGTTTAGTTCTGGAAGCCTTGCTAGTCAAGGGTTTTAGCCCCCCCAATCGACACCAGTTTTTGCAGTGTCAATAACTCCCAAGAAATTCTCAATAACTCGTGAACTTTAGAGACTGGAAAGCTTACTGTGCAAGCAATCGACACCAGTCAACGAAATTATGCGGTTTTCAAGGTTCGGGGTAGTGGTGTCGATGAGTTTTAACTCACCTAATAAAATGTAAAATATATTGCCTGAAATTGTCAAGTTGTCTTCTGCAACTATTTCGGCGATAAAGACTAGATTACAGTCTGAACCTAGATAATTGACGTGAGGTACAAGCAGTCATAATTAAACGCAGATGGACGCAGATAAACGCGGATAGTTTTGTACCTTTTTTTTTTCTTCCTACCTTTGCGCCTTTGCGCCTTTGCGTGAACCTAATTCATATTTAAAATCAGCAACACCAGATAATTAACCTATATAATCACCGTTCTGCCTCGGACAGGGCAGAATAAAGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCCCCGTTAGGGGAAGAGGTTATGGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.30,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 3457129-3458302 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007203.1 Nodularia spumigena CCY9414 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================ ================== 3457129 37 100.0 36 ..................................... CAAAACTTCTATAATGATTAGAGGTAAATGTAGCTT 3457202 37 100.0 35 ..................................... ACCATCTTGGCTGATGCCTGTCTTGCACTGATGTA 3457274 37 100.0 36 ..................................... ATATTTCTTAAGTAACTTTCCTTAATCTGGGGAAGC 3457347 37 100.0 40 ..................................... GTGGGTAGTGCTGTGGCTGCTGCTAGTGCAATATTTGATT 3457424 37 100.0 39 ..................................... CCTGGGTAAATTCCTTTAGCTGCATTCTCATTACTTGTG 3457500 37 100.0 42 ..................................... TGCCAAGCTAATGGCAAACGGGTTGATAACTACATGAGGCTA 3457579 37 100.0 39 ..................................... TTGTCTTTGATAGCGCGGTGCAAAACGGTTTGATTACTT 3457655 37 100.0 40 ..................................... TTCCTCCCAGTGTGGATACGTTAGGGGTGCATGAGGAAAT 3457732 37 100.0 38 ..................................... ATTTTAAGTAGTAACTTACCGCCATAATTGATGTACGC 3457807 37 100.0 37 ..................................... AACACTATCTCTGGTTCAGAAGGAAAGTCACCAATGG 3457881 37 100.0 48 ..................................... TATTTTTGGGAATTTTGGGGAGTTTTGGCGGCGAACTGTGGTGAACTG 3457966 37 100.0 41 ..................................... AAGTATTCTGGTGTGTACAAATCCGGATCAAAATTAATGGG 3458044 37 100.0 35 ..................................... AACGCGCCCCTTCTTTTTACCCTTTTCCTTACCAT 3458116 37 100.0 35 ..................................... GTCACAGTCTTAGTTCTAGGATTATAACAACCCAT 3458188 37 100.0 41 ..................................... CTTAAAGAACAAATAGGAGAACATACTTCTTCTATTCCTTT 3458266 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================================ ================== 16 37 100.0 39 GTTTTTCATAACCATTTCCCCGCAAGGGGACGGAAAC # Left flank : TTAGATGAAAAGGCCTTGACACAACAGTTAGAAAATCGCTGGTTAAAGGTAATTAAAGTCAGTGAGGATAATTTGCGGATTTACCCGTTGGATAGTACAGCCAAGCAGCAAACGCGAGTCTATGGAAGTTCACCACCTTATGAACCGCCGGATTATTTAATTTTGTAAAGTTCAGTGTCTGAATTTTGCGGGAATACAAGTGCTGAAAGTGTTGTTTTTGCAAGCTTTCGGCACTATGTTACGGTATGTAAAGCAGTGGGAAATTTTGTCGCCGGGAGGTGGGAGGAATTAGATTGAGTAACGGTTTGTGAATAAGAGTAAATTTGTGGTTTTTGACTTGACTCGTTGGTGTTTTGCTGCTAAATTAAATATATCAGCAGATTATGCTGAATTTAATTCTTCAGTTATACTACGGTTAAGCTTTGATACTTATCGTTTTGCGTAGTCCGGCGCAACAGCACCTTGAAAACTAAATATGACAACGGTTTCCACTTCATGGG # Right flank : CTTTGAGTTAATAACGAGATTGTCAAACCGGATTGCTATATAATATTTATAGTGAGTAGGATACAAATAAAAATGTCAGAAAAAACTTTTGATATTGCTTACTTATCTGAAAATTTGCTTGATTTATTATCAGATATTCAAAATCATGTGGAAATTACGCTAACTCGTCAGGGCGTTCCTTGGGCAAAAGTTTTACCTCTTGAGCCAGAAGAGTCTACAGTTGAAAAAGCGGGTTTAAATCATGGCTCAATGGCGATGAATAGTGAAGAAGTCTTAGAACCAAGAGTTCCAGGGTTTTGGCAAGGAAAAGTTAAGATTTCTGAGGATTTTGATGACACTTCAGAAGAGGTGATTGCTGCTTTTTATGGTGAAGAGTAATGAGTTTTTTATTAGATACTCATATTCTGTTATGGTTTTTAGAAAATGATTCTAAGTTGTCAAATCAGGTACGCGAAGTAATTATTAATCCTAAAAATTGAATTTTTGTTAGTGCTATTAGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCATAACCATTTCCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //