Array 1 214646-214800 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGDS01000112.1 Streptomyces sp. H036 P430contig2.1, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================== ================== 214646 28 100.0 36 ............................ CAAAGGGCTCGCTGACGCCGTCCGTGAGGAGCGCGC 214710 28 100.0 35 ............................ ACAGAGGCTCGCAGACGCGTGATGGAGACGTGTGT 214773 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ==================================== ================== 3 28 100.0 36 AGCGATCGATGGCGGCTTATGTCCAGCC # Left flank : CAGCCGAGTACGAAAACACCGCAGCCTGACCAACACAAACAACATGTCCGCCAAACAGGAACAACCCCAGAACCCCAGGGCATAGGCCGCACCTAATCGCTACGCGCTCCTGACGGACGGCGTCTGCGAGTCTCTGTGGCTGGGCATAGGCCGCGCTCGATCGCTACGCGCTCCTCGACGACTGCGTCCGGCCCTCGTCTGGGGCTGAGGGGGGCGGAATCGAGGGGCGGGAGGGCGATCCATCGGCTCAGTCGATGCCAACCCCTATCAAGACCACGGTGAGATCCCACCCGTCGGCACAGGCAGGGGTAATTGGGGCATATTGGAGGCTCTTTGGGGCGCGCACTTGCCCAGGCATGGATTGGCATCGCCCCAGCCGTCATCTGACGTTTTTTCCTCCCCACGCGGGGGTCGGACGCCGTCCGTGAGGAGTGCCGGAAGGTTTCTGCGACCTCTGGCCAGCCCCAGACGGACCGCAGGCGCGTGATCGAGAAGCGCGC # Right flank : ACAGGGGCTCGCAGGCGCCGTCCGTCAGGAGCGCGTAGCGATTTGGGGCGCCCCCAGCTCCCGCCCGGGCATCTCCGACGCCCCGTCCCTGAAAGCTGAGACCGGCCCGTTCTTCTGGGGGCTTCCCGGCAGTCTTTCGGAATTCCGTGGCGGGACGGGCGGTCAAGGGTGGAGCGCAGCGACATCGCGAAGCGACGCGACGAAGGAGCGCCCTTGACGGGCCGGCCCGACGCGGAGAGAC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCGATCGATGGCGGCTTATGTCCAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [30.0-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 4577-3384 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGDS01000196.1 Streptomyces sp. H036 P430contig89.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 4576 29 100.0 32 ............................. CTCGCGGTCTCCTCATCCGACGGGCCGCTGCT 4515 29 100.0 32 ............................. CTCGCGGTCTCCTCATCCGACGGGCCGCTGCT 4454 29 100.0 32 ............................. TGCCCGGCTGCTGTTCCAGCCAAGCTGAGCGA 4393 29 100.0 32 ............................. CAGGGACACGGCGAGTGGGAGGGCAAGAGCGA 4332 29 100.0 32 ............................. CCGCTCCTGCGGGCCTTCCTGCTGGCCTGCGT 4271 29 100.0 32 ............................. GGCGTGAACCACAACCGTCATAAGCGACCGGA 4210 29 100.0 32 ............................. GACGTCCGGCACGCCATGGACACCTCGAAGGT 4149 29 96.6 32 ..T.......................... CCTCGTCTGACATTCGCGCGACAACCGAGAAG 4088 29 100.0 32 ............................. GGGACGCGGCCCTTCGAGCCGCGGGCGGACTT 4027 29 100.0 32 ............................. GCCGGCACTCTCCGCACGAACCGCACCGGCAA 3966 29 100.0 32 ............................. TCATCCAGATGGCCCGCAAGTGCGGCATCAAG 3905 29 100.0 32 ............................. CACGCACAAGGAGGAAGGAAGCGGCGTGAAAG 3844 29 100.0 32 ............................. TCGACGGGCTGCGGGCCGACTCGCTGGCCGGG 3783 29 100.0 32 ............................. GCGTACGTCGGCTGCACGCTCTCGGGGAGCTG 3722 29 100.0 38 ............................. TTGGCGTGTGCGGTGCGGCGCTGGGCCTGCTCCTGCTC 3655 29 100.0 32 ............................. GGTACCGCCACCATTGCGCCGGAGGCATTCCG 3594 29 96.6 32 ............................T GGTGAGCGTGGCTTGCCTGACCGGCTGCGTCG 3533 29 96.6 32 ............T................ GTCATCGTCCCCGACGGACTGCTGATCCCGGA 3472 29 96.6 32 ................T............ ACCGGGTGACGGATCCGGCCCGTGTTCATGAC 3411 28 82.8 0 ....A................T.A.-..T | ========== ====== ====== ====== ============================= ====================================== ================== 20 29 98.5 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : ATCGTCACCCTCCAGTCAGACCGAGAGGTGACCGTTCCCGCTGGCCGCAACTACGCCGAAGCGGTGACCTGGTGACAGTCATCGTCCTCACTCACTGCCCGCCCGGCCTGCGGGGATTCCTGACCCGCTGGCTCCTGGAGATCTCTCCGGGAGTCTTCATCGGAGGCCCGTCGGCGCGCATCAGGTCAGTGCTGTGGCAAGAGGTGAAGCAGTACGCGGGAAACGGGCGTGCCCTCCTGGCGTACAGCTCGGACAACGAACAGGGATTCGCGTTCGAGACGCACGACCACAAATGGCACCCGGTCGACCGTGAGGGAGTCACCTTGATCCACCGCCCCAGCGCCCCCACCGCACAGATGCCACCACCGTCCTCAGGCTGGAGCAAGGCCTCCAAACGCCGACGGTTCGGAACACGTTGAATGCATTTGAGCTCTATGTCTAAATATCAAGAAGTAGTTCGTGGCGGCCTTCACACCGACTAAAACCTCAGGTCAGGAAGT # Right flank : GGCCGGGCCCAGCCAGAGGTGCTTTCCTGGGGATGCCCGGTGCCAACGGACCTACCCTTCACACCAGCGGGGGCTGGAGTGAGTTGGTACCCGGCGGACGCTGCCGCTGCCAGAATCTCGGAGGGCTGACAGCCTGAGCTCTCGTAGCTATTGGGTGAGTCTGGTGGGCGGAAGGCAAACTTCGGTCACTTCCTCGGCCCGGTTTCGCAGGAGCGGGGCCAATTCGACGTACCAGCCACGGCCCACGGCCTGAAGCATTTCGGCGAGGGCGATCTGTTCGCCGATCCGGCCGGCGGGGGTGTCGAGGACGTGGGCGAACTCGGCACGGATGCGGTCGGCGACGGCGGGGACGCGGAGGCTGTTCACGTACAGCATTGCGGGGTCGTAGCCGACGGGGACGGCGCCCCAGCGCTCCCAGTCCAGGATGACGAGGGGGTCGTGGGTGAGGTTGGCCCACTGGAGGTCGGCGTGCCCGGTGACGCGTTCGGTGATGGCCGGGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 105984-105830 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGDS01000079.1 Streptomyces sp. H036 P430contig17.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ===================================== ================== 105983 27 100.0 37 ........................... CAAAGGGCTCGCTGACGCCGTCCGTCAGGAGCGCGCA 105919 27 96.3 36 .......................G... GCAGTTGCTCGCAGGCGCGTGATGGAGACGTGTGTG 105856 27 96.3 0 ...............T........... | ========== ====== ====== ====== =========================== ===================================== ================== 3 27 97.5 37 GCGATCGATGGCGGCCTATGTCCAGCC # Left flank : CGAGCCCCTGTGGCTGGACATAAGCCGCACCCAATCGCTACGCGCTCCTCACGGACGGCGTCTGCGAGCCTCTTGGGTTGGGCATAGCCGCCCTCGATCGCTACGCGCTCCTGACGGACGGCGTCTGCGAGTCTCTGTGGCTGGTCATAGGCCGCGCTCGATCGCTGCGTGCTCCTCGACGACTGCGTCCGGCCCTCGTCTGGGGCTGGGAGGGCGGAATCGAGGGGCGGGAGGGCGATCCATCGGCTCAGCCGATGCCAACCCCCATCAAGACCACGGTGAGATCCCACCCGCCGGTACAGGCAGGGGTAATTGGGGCATATTGGAGGCTCTTTGGGGCGCGCGCTCGTCCAGGCATGGATTGGCATCGCTCCAGCCGTCATCTGACGCTTTTCCTCCCCACGCAGGGGCCAGACGCCGTCCGTGAGGAGTGCCGGAAGGTTTCTGCGGCCTATGGTCAGCTCCAGGCGGACCGCAGACGCGTGATCGAGAAGCGCGTA # Right flank : ACAGGGGCTCGCAGACGCCAAGCCTTCAGGAGCGCGTAGCGATCAGACGCGCCCCGGGCTCCGCCCGCGCAGGGCAATCGCCCCGTCCCTGAAAGCTGAGACCGGCCCGTTCCTTTGGGGGCTTCCCGGCAGTCTTTCGTATTTCCGTGGCGGGACGGGCGGTCAAGGGTGGCCGAAGGCCATCACGAAGTGACGCGACCGCAGGGAGCGCCCTTGACGGGCCGGCCCGACGCGGAGAGACGATGGGACTGACGGGAAACCCCCAAACCCTCCCTGATCCCGACCCGTATAGGTCCCGCCCGGCGTAGCCCCCACGTCCGTCCGGCTCCGGCCGCGCGGCTCCGCCCCCGACACCACGGCGCGCCCTTCCGGTCCCGCCCGAGTGGGTCCCCCCCGACCCCGACCGTCCTCAGTCGTTCAGCAGGCGGGCCTTCGCCGTCGTGAACTCCTGGGGGGTCAGCAGGCCCTCGCGGGCCAGGTCGGCCAGTTGGCGCAGCTCC # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGATCGATGGCGGCCTATGTCCAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 3103-3374 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGDS01000003.1 Streptomyces sp. H036 P430contig100.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3103 29 93.1 32 .....C..............T........ CTGAAGGACCGGATCACTCTCTGCCCCGACTT 3164 29 86.2 32 ...T.CT.......T.............. ATGTCGCCGATGGTCACCTCGCCGGAGTTGGC 3225 29 100.0 32 ............................. ATCACCCGTGCCGCGGACCTTGCCCAGATCGG 3286 28 96.6 32 .....-....................... CTGCGTGAGGCGACCATGACCACACCTGACTT 3346 29 96.6 0 .....C....................... | ========== ====== ====== ====== ============================= ================================ ================== 5 29 94.5 32 CTGCTTCCCGCACCCGCGGGGATGGTCCC # Left flank : TCCGAGGGACTGGCGTCGATCAGACCGATGGCAAGGGCACGGCTGATGGCCAAGCGGTTGGAGCCCCACCGGTCCCTCGCCCCGGTAGGCGCGCTACTGGAGCGCGCGAAGGGCTAGCGGGTGGCCCGGTTGATCCAGTCCAGGTACTCGGCACGGCCGGCGTCGATCGTGAACGCGATGACCTCAGGCGAGTCATAGGGGTGGTTGTCCACCAGATGCTTCTCCAGTGCCTCGCGCCGGTCACCGGTCGTACGAAACGTCACCTGATACTCGATGCCCTCGCAGACCTCCCCGAGATGGCGGTACGTCGTTTCAATGGGCCCGGTCACCTGCCCGGAAGCGGCTAGGCTCGCCTCCACCGCCGAGCGCGACAACTTACGCGCAGCATCCTGATTGTCCACGGTCGTGATTACGATCAAGAAGTCAGCCATAGGGGCAACGTACCCACCCAACCAGTCGCACTCATATAGGAGGCAGTGAGACTTTGGGAGCACCGGCAC # Right flank : CGACACTGGCCCTTCGCCTGGGTCATGGCCGCGCTTTGACTCCTACCGTTCCGAGCCGTCCCGGTCTTCCCCAGCGCCCTCGTCGCTGTCTCCGAAGATGGGACGAAGTACCTCTCACAGGTCGAGGTCGAGGCGCTGAGCGGGGATGGACAGAGACCGCTGGACTTCACTGCTGACGTTGGTCGCCGTCGCTCGCCACTCCGCGACGAAGGGGTCGGCTTCCTGGCTGCTGTAGACCGTGATCGGATCCAGCGTCACGGTCTCATGGGGACGAAGGTCCACCGGAACGAAGCGGATGAGGGTGCGGTCCTCCTGCTGCTCGATGTCTGGGGAATGCAGGGACGGCAGCTGGTAGGCCGGCGGCTGCACCCCGAGCATCCTCCGGTAGCCGCCGAGGGCGGGGATGGTGCCCGCTCCGTATTTGGCTGGCTGGGAAGGCCAGTCGATCTCTTCGTCTGTGTCGGCCGTGACATGCGCCGAAACGGTGTCGGGGAGGCTCA # Questionable array : NO Score: 3.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTTCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.80,-9.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 8631-10868 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGDS01000003.1 Streptomyces sp. H036 P430contig100.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================= ================== 8631 29 89.7 32 G..........CG................ TACGTGCAGGACACCCCCGGCAGCGACATCGG 8692 29 100.0 32 ............................. TTTCCGGAGGCGACGCGGTTGGTGACGAACAC 8753 29 96.6 33 .......G..................... ACCTGCAGCACCGCGAGCACCTGCAAGTCCTGC GA [8774] 8817 28 96.6 32 .................-........... GCCGGCCGCCCCCTCCGCGGCGAATGCGGAAG 8877 29 96.6 32 ....................A........ CTGAGCTCCAGCTCCGGCGCGTCCGTGACGAA 8938 29 96.6 32 ................T............ GTCCCGTCCGCCTCCGGGCCGCTCGCGCTGCC 8999 29 96.6 32 .............T............... GCCGGCACCGGGTACGAGGACTTGAGGCGGGA 9060 29 100.0 29 ............................. CTCCGGGTCTCGATTCCCGCCGTCTCGGC 9118 29 79.3 32 GA...G.T.C..............C.... TCCAGCCCGACGAAAGGGGAAGCCATGCTGCA 9179 29 93.1 32 ...T................C........ CAGTAGGAGCCGGTTTCCGGCGCCGTTCGGCC 9240 29 100.0 32 ............................. TCGACCTGACCCGCCGCCGGGAACTGCTCGTC 9301 29 100.0 32 ............................. TCTGCCCCCGGGGCTGCGGCTACGCTGGAGCC G [9318] 9363 29 100.0 32 ............................. AAGCTCCTGCCGTCGATCGGGCGGTTCAGCGG 9424 29 96.6 32 ..............T.............. GGGCAGGAGGAGTCGGCATCCAGGTCCAGGAA 9485 29 96.6 33 ........T.................... ATCGGGCACCTGGCCGTGTTCGATGCGCCTTCG 9547 29 100.0 32 ............................. TGGCTCGGCGCGATCCCCGGTCACCTCTACAA 9608 29 96.6 32 ..............G.............. GCCGCTGCCCAGACGAGGATCGGGCCCGTCAG 9669 29 93.1 32 ............T....A........... CACGTGCCCTGGCCGCCGCCGACGTTCATGCT 9730 27 86.2 30 ...........-...A.-..........A CCGCGGCTGGCGGAGAAGTCGGTGCCGTGG 9787 28 89.7 32 .....-...........A......C.... GCCCTCAAGGCCGGCGGATCCCTGGCCGAGGC 9847 29 89.7 32 ................T....T.T..... ATCGCAGCCCCGCTGGATCAGCTTCGCCCCTG 9908 29 96.6 32 ..............T.............. GAGACCGGCATGCACGACATCAGGAACATCTT 9969 29 96.6 32 ......................C...... AAGGCCACCGTGCGGTACGCGTGGGGCCGCCC 10030 28 93.1 31 T....-....................... GTCCCGAGGTGGCATCGGACTGCCTGGTGCC 10089 29 100.0 32 ............................. TACCTGGCGAACCTGCGGCCGGACGGCTCGGG 10150 28 96.6 32 .......................-..... GCCTTCTGCACCGCCCGGTCCAGGCCGTCCCC 10210 29 93.1 29 ................T........C... GCCACCGGCGGCGGTGGTTAGAGCGGCTG 10268 29 93.1 32 ......T.......T.............. ACCAAGGGCAAGTTGGTCACGATCGAGGCGCT 10329 29 93.1 32 TC........................... GCGGTCGTGATGCCGGTGACCGTGCCAGCCGT 10390 29 93.1 32 ......A.................A.... TTCTGGGGCCGGATCCAGATCGGCCCGGACGT G [10405] 10452 28 89.7 32 ........T.A......-........... ATGCCGGTTCGCGCGGCGGACGACGCCTGCGT 10512 29 93.1 32 T.............T.............. ACCGACCTGTCGCTGGACCTTGCGGGCGCGCC 10573 29 93.1 32 .A...............A........... ATCCGCTGGTGCACGAAGTAGGGCGCCTCGAA 10634 29 89.7 33 ........T..C..T.............. TGCGCCGGCACCCGGCGGGTAACGACGAGTCCG 10696 29 96.6 55 .......................A..... TCCTGGGCGGTGGTCTGCTCCCCGCACCCTCAGTGGCAGGCGCTACCGTTGCCGT 10780 29 96.6 32 ...G......................... CACACCCTGCGCAGCCTGGCGGAGGCCACCTT 10841 28 86.2 0 .......A.......A......-.A.... | ========== ====== ====== ====== ============================= ======================================================= ================== 37 29 94.4 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : GCTGAGCTTGCCGGTGAGGAGCCGCTCGAACGTGAACTCCGCCTCCCCGTCCGCGCTGGTGGTGTCGACGAGCCACGCGGTCTGGAGCAGGTGCTGGAGCGCCTTGCGTTCGGTGTCTGCGGTGAACCTGCTGGCCTCCCCGTCGTAAAGGCCGTCCTGAGGCCGCGGCGCGAGGTTGAAGTCCCCGCAGATCAGCAGGGCCGCCCGCCCTCGGCGGCGGCAAGCGTCGCGAGCTCGCCAAGCTGGGTTGTGCGCGCCGCGCTGGTATAGGCGTCGAGGTGGACCTGAAGGACGGTGAGCCAGCCCAGTTCCACTCGCTGCGCCCAGCCGGTCGGTGCGGAGGCGGATGTCCTCGCGGACCCAGGTGGCGAGGTAGCCGTTCCCGCCCGCGAGGACGTACCCGGGCAGGAGCGGCGGGCGCCGGTCGACGGGCTTGTACGGCTCCTGCGCAACCCGCGAGGTGGTCCGGACGCGTCAGCGTAGGGGATGATGCTGCCCTC # Right flank : CCACCGGCCACCTGCCCATGGTCGAAAGCCCCGGGGAATGGCAGCGGCTCATCACCGACTTCCTCGCCGAGCACGACGCCTGAGAGACGCACGACCCCGAGCCCGAGGGAGGGGTCCCGGGCTCGGGGTGTGGGGCCTGCCGGCGTCCGCCTACTTGAAGGTGACGTCCGAGCAGGAGTAGAAGGCCTCCTCGCTCTGGAAGGAGCCGTCGGGCCGCTTCAGCCCGTGCCAGATCGTGTAGATCAGGTGCTTGCCCTTCTTCTCGGGGAGCACCGTCTTGAACGTGAACGCCTTCGCGCCGAGGAAGCCCGAGGGGGCGGCCGTGGCCGCGGTGTTGTCAGCGCTGAGGAAGGGGGTGTCCTCCAGGTCGGACCACTTCAGCGGCTTCTTCGGGTCGTAGCCGTCCTTGGTGACGTACATCTCCATGCGGTACGGGTTGTGCAGCGCGCTGATGTCGTAGCGGAGGTCGTACTCGGCCCCGCCGGGTAGCGTCGTCGAGG # Questionable array : NO Score: 5.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.24, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [19-28] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //