Array 1 3747824-3746392 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042505.1 Leclercia adecarboxylata strain E1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3747823 29 100.0 32 ............................. CAGATTGCAGCGGTTGAACTGCGTCACCTGAT 3747762 29 100.0 32 ............................. GGATGAGTTCACACCGTATGAATATCAGCTTA 3747701 29 100.0 32 ............................. AAACAACAACATCTCCGGACAATGCATCCGGC 3747640 29 100.0 32 ............................. ACGTGGGCCGAGACGATCGGCAGTTACCCCGA 3747579 29 100.0 32 ............................. TACGGCATTTTTAAACAGACTGCTGATGGCAT 3747518 29 100.0 32 ............................. GAAACCGGCACCGTACCAGATATCGTCCCGGC 3747457 29 100.0 32 ............................. TTTGCGAGCGCAGGGTTCCAGTAGCTGTTTTT 3747396 29 100.0 32 ............................. CTATCAGGCGGAGAAAAAAGCCCGCTCACTCA 3747335 29 100.0 32 ............................. CACTCGCCAGCAGATAGCTCTCTCTGGTCCCA 3747274 29 100.0 32 ............................. CCCCGCAACGGTTAATTTGCGGGTACGCAGCA 3747213 29 100.0 32 ............................. CGTTCGCCTTAACGATTCCTGCGTAGTAGCGG 3747152 29 100.0 32 ............................. CCATAATCACGCCCCCAGATATTCGGCTTGCA 3747091 29 100.0 32 ............................. CCTTTCGAAACGGTAACCGGCACTGGCTACCG 3747030 29 100.0 32 ............................. AAAACGATCAATCAGGGTTAATTGATCTATCT 3746969 29 100.0 32 ............................. CGCCCGCCTGTAGTCGTAACCTCGTAACGACC 3746908 29 100.0 32 ............................. GCGGTGCCTCGGCTTCGCAGCTTCTCAAGGGA 3746847 29 100.0 32 ............................. TAATCGCATTCAGCTTGTTTGTTTGCCTGAAA 3746786 29 100.0 32 ............................. TTTCTGCCCTTCTCATTTTGTCACCCCATTTA 3746725 29 100.0 32 ............................. GTGATGAAGAACGCCGGAGGGCATCAGAGAAC 3746664 29 100.0 32 ............................. AATACAACCGACGTGAATGAAATGACCGAACC 3746603 29 100.0 32 ............................. TTTTAGGCCGGACAGGTCTGGGATCGCTTTTA 3746542 29 93.1 32 ............C.......T........ GTATACGCCAGCGCCAGCACCGGAACCATTAC 3746481 29 93.1 32 ............C...............A TGGGATAGTGTGGCGCGGCCTGATACAACGTA 3746420 29 82.8 0 ..C........C.T...........C..A | ========== ====== ====== ====== ============================= ================================ ================== 24 29 98.7 32 GTGTTCCCCGCGTCAGCGGGGATAAACCG # Left flank : GTTCTGGCTGCCGGTGAGATTGAGCCGCCAAAGCCTGCGCCAGATATGTTGCCCCCCGCAATTCCTGAGCCTCAACCGCTGGGGGATAGTGGCTATCGGGGGCGCGGCTGATGAGTATGGTCGTTGTGGTCACAGAAAATGTACCGCCGCGTTTGCGGGGAAGGCTTGCCATCTGGTTATTGGAGATCCGGGCTGGGGTATATGTTGGTGATGTCTCTAAACGCGTGCGGGAGATGATCTGGCAGCAAATCATCCAGTTGGGTGGGGTTGGAAATATCGTTATGGCCTGGGCGACAAACACGGAATCAGGTTTTGAGTTTCAAACCTGGGGGGAAAACAGACGCATGCCGGTAGATTTAGATGGGCTGAGGTTGGTTTCCTTTATTCCTGTTTAAAATCAATAATTTAATAGCTCTTTAATAATGTGGAAATGTTGGATTAAAGTTGGTAGGTTGTTGGTTGCTGAAAATTTCTATTAAAAACAGAAAGATAAGATTAGT # Right flank : CGACTAATCTTACCCCGTATAAAAATAAACAGAAAAAAGCCAGGCACCGTTTGGCGGACCCTTTATCAGGCTTTTTTCCCCGCTTTCGCCAGTTCCTTCACCAGTGGCAGCATAATGCGCACCACGTCCCGGCTGCGGTGTTCAATCCGTTGTGGGAGGGCCTCGTCGATATGCTGCAGATTATCCAGCCTGACGTTATGCCAGCTCGATCCCTGTGGGAAGGCTTTTGATTTTGCCCGCTGCTGATAACCGTCTTTCTTACCTAATGACCAGTTGGTGGCCTCAACATACAGCACCGGGATCCCGGCTTTATCGAAAACTTCACCGTCATTACAGCATCCGGTGCCTTTCGGGTACGCGGCGTTGCCACCCGGGTTGGTCGCGGCAAAAATCCCGTGGGCGCGGGCAATCGCCAGCGCGCGGTCGCGGGTCAATTTACGCACCGGGGCAGGGGTGGTTTTTCCGCTGTTAAAATAGAGTTTATCGCCCACGATTAAGTT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //