Array 1 504865-506724 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACGGF010000003.1 Citrobacter braakii strain F2R NODE_3_length_752409_cov_40.569115, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 504865 29 100.0 32 ............................. CTGTGGCACCAGCGGGCGACGGTAGGGATTTT 504926 29 100.0 32 ............................. GATGTGTCCGCAGCCTCGAACAGCTTCAACCA 504987 29 100.0 32 ............................. CCTTTCTTGTTCTTCTCCTGAATACGCGCATA 505048 29 100.0 32 ............................. ACATGTTTGGCGCTATATTTCTTGATGAGTGT 505109 29 100.0 32 ............................. TATTGCACCGTCCGTTTATGATTGCCCCAGAG 505170 29 100.0 32 ............................. GCGACCGCGCCGATTTAGCATAAACTGCATTG 505231 29 100.0 32 ............................. GGAACGGATAAAAAGGCGTACATCCGCCTGAA 505292 29 100.0 32 ............................. TGGGATGCTAAATTTGTATTCACGCAGGATGA 505353 29 100.0 32 ............................. CTTACGGTTACCCTTCATCGTGGCTTGATGTG 505414 29 100.0 32 ............................. GTCGGAGGCTATCTGCACACGCCGCTAACAGC 505475 29 100.0 32 ............................. ATTAACGCCGCAAATGATTTCCTGATGAGTCA 505536 29 100.0 32 ............................. TGTCTAACGGCTATCAGCATGATCACACCTTT 505597 29 100.0 32 ............................. GCTAAACGTAACAACGCCAATTTGTGGGATAG 505658 29 100.0 32 ............................. ACTGGCACCAGTTCCCGCCCGTCTCTGTTAAC 505719 29 100.0 32 ............................. CAGCGATACAGGCCATTCCAGTTCGAGCCAAA 505780 29 100.0 32 ............................. GGCGTTAAAACCGAATCATATTGGCTGGGTGT 505841 29 100.0 32 ............................. TGCTCCGGCAGACGTAACAGCAGTGTTGTTTG 505902 29 100.0 32 ............................. CAATATTTTTACGGCCATAACCAGGCATGGAT 505963 29 100.0 32 ............................. CGAACGACAGATAAAAGAAATGCGTACCGGAA 506024 29 100.0 32 ............................. TCAACACGCTGACAGAAAAGCAGCGCCAAATC 506085 29 100.0 32 ............................. CCGCATAGAACGGGAGAACATGGGACAAAATT 506146 29 100.0 32 ............................. CCGCATAGAACGGGAGAACATGGGACAAAATT 506207 29 100.0 32 ............................. CCCGATTTTAACTTCGGTCAGATACTGCAGGG 506268 29 100.0 32 ............................. GGGAAGTAACGGCAAGCTGCCGCATTGTCCCC 506329 29 100.0 32 ............................. TTGCCCGGTGGGAAAAGTCCGGTGAAACAATC 506390 29 100.0 32 ............................. CTGTTGTTCAGGTCAACGTGGAGCCGTTGTTG 506451 29 100.0 32 ............................. CACACCCTAACGCCGGAAAAATGCTGCGCCAC 506512 29 100.0 33 ............................. CCGCCTAAATAATCCGGTTTTCCGTAAATCTGC 506574 29 100.0 32 ............................. CTATTTCCATCCGTAGAAATTCTGGAAAATTT 506635 29 100.0 32 ............................. GAACATCCTGAAGTACACATCAAAAACGAACC 506696 29 89.7 0 ............T............T..A | ========== ====== ====== ====== ============================= ================================= ================== 31 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATTCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTAATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTACCCGCCTTTGCCAGTTCTTTCACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCGTTGTCAAAGACCTCTGCATCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //