Array 1 1573-2586 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLTZ01000237.1 Xanthomonas translucens pv. graminis isolate ICMP6431, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 1573 31 100.0 35 ............................... GGCTGCGGTGTGGTTGTATCAACCGGAGTTAGCGG 1639 31 100.0 36 ............................... CGGTTGTCGTCCACGAGTCGCAGTACGTCCGCAAAA 1706 31 100.0 35 ............................... TCGCTAGGGGTCACCGTGCGCAGATTCGAGATGGC 1772 31 100.0 35 ............................... TACGGCATCAACGTGATTGTTGCGGTCGGCCACAA 1838 31 100.0 34 ............................... GTCTTGGTCGTAGAGGCCGCGAAGCATGTCGTAA 1903 31 100.0 34 ............................... AACGATCGTGGTGAGGTTGTGACCACACTATACG 1968 31 100.0 33 ............................... CGCTTCAGCGCCGCGCGGATGCTGGTCTCCAGG 2032 31 100.0 33 ............................... CCGCTTCCCCGCAGGGTTTTGGGCGCTTGGGGT 2096 31 100.0 35 ............................... ATCTCTTGGGTCTCTGGGTTGGCGGGGCCGGTGTG 2162 31 100.0 34 ............................... GACTTGGCGGTTACGGATACTGCTTTGCTCAATT 2227 31 100.0 36 ............................... ATTTATGACGGAGAGCGATTTTTTCGGCGGCATGAT 2294 31 100.0 34 ............................... GCGCAAACTCTGCCGGCTCAAGCACAAGCATGTG 2359 31 100.0 34 ............................... TTTCTGGCTATCAGCTGCGCGGCCTGCAAGCGCG 2424 31 100.0 35 ............................... GGCACCAAAGATCCTTGCGGCACAAGCTTTAGCGG 2490 31 96.8 34 ....................C.......... GCGTTGGCAGTTCGTCGCGCTGGTGAGGTTTAAG 2555 31 87.1 0 .....T.........A.C.......G..... | C [2580] ========== ====== ====== ====== =============================== ==================================== ================== 16 31 99.0 35 GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Left flank : TGAAAAGGCCGCCGCGCCATGATGGTTTTGGTCAGCTACGATGTCAGCACGAGCTCCCCCGGCGGCGAAAAGCGACTGCGCAAAGTCGCCAAAGCCTGCCGTGATCTCGGCCAACGCGTGCAATTTTCGGTCTTCGAAATCGAAGTGGACCCTGCACAATGGGCCGCATTGCGGCAGCGCTTATGCGACCTGATCGATCCGGGCGTCGACAGCCTTCGCTTCTATCAGCTCGGCGCGAAATGGGAAGCACGCGTGGAGCACGTCGGCGCCAAGCCCAGCCTTGACCTCAAAGGCCCACTGATCTTCTGACGCGAACCGCAAGCGACCGGGGAAAGCCCGGCAGGTTCGCGCAACAAACCAAGTCATTGATTTAAAATAAAAACATCAACCTCTTCCACTTGCTGGTATGTCCGCGGAAGCCGAATTCGATTGCGTCTCCTAAGGGTTCCGCAAAAGTGCGGACTTTTTCCCAACACCCATCAGCACTTATGCTTAGGGCG # Right flank : CTGACTTGGCGACGCTGTGTCGTTCTATCGCCTTTGCCCACAAAAAAAGGCGCAGTCTCGCGACTGCGCCCAGCGTGCCGCGCCGGCCGGGAGAGAGTCGGCTGGCGCGATCCGTGACTGCGGTGTCCCTAGCGGGACGCGATGCGCATCACTTGACTTCGAATTCCTGCACCGTTCCGGCCGGCTGGCCGTTCACGGTGACCTCGGCCTTGTACTTGCCGGCCGGCCAGCCCTTGGCGTTGGTGAAGGAGATATTGGTGGTTTCCGCACCGGCCGTGGTCAGCGTCGCGTTCTGCTCGCCGGCGGTCTGGCCGTCCTGGAACAGCAGCTTGGCGCCGACAGCGGTGTTGGTGGAGGAACCCTCGGTCTTCACCGAGACGATGATGGTGTCCTTGCTGCTCAACGTGCTCAGCGGCGCCACCGTCTTGTCGGCGCCCGCACTGTTGCCCACGGTCACCGAGGCGACCGTCACCGTGCCGGCAGTGGCCGCGGCCGGCGCC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.30,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //