Array 1 332871-331449 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039378.1 Pediococcus pentosaceus strain SL001 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 332870 36 100.0 30 .................................... ACAATTTCGGAGATGTTATCTAGCTTGTGG 332804 36 100.0 30 .................................... TTGATACTATCCCATGTGACCGCACCGTTG 332738 36 100.0 30 .................................... CTAGCTTCGTCACTGAACCCGCCTTTTTTA 332672 36 100.0 30 .................................... AAAAGAAACAAAATAATATGCGTGTACCAA 332606 36 100.0 30 .................................... TGGTCATTATAACCACCACCAGTAGCAGGA 332540 36 100.0 30 .................................... ACAGAGGTAAAAGTAGAGGAAGGTACTAAA 332474 36 100.0 30 .................................... TCCGTAACGATTTGAAAGGCCAAAAATTTG 332408 36 100.0 29 .................................... CAATAGCGTTTTTAAATCATCTTCGGTGT 332343 36 100.0 30 .................................... TAAGTAAATCAGCTTTTATTTGGACTAAGA 332277 36 100.0 30 .................................... TACCAGTTAATGAGATACTTTGATTAGTTG 332211 36 100.0 30 .................................... TTTTAGCAATGACCATTAAAACGTCGTGCA 332145 36 100.0 30 .................................... CAGTGCCATCTTCTCCATTAACAATTGCAC 332079 36 100.0 31 .................................... TCAATCGTTCGCGCCTTTGATCCTCGGTTAA 332012 36 100.0 30 .................................... GTGTAGGAATGTACACTTCTGTATCATCTA 331946 36 100.0 30 .................................... CGATGGTGTTTTCAAGTGGTACATTGCCCT 331880 36 97.2 30 ................................G... TCTAAATACGGCTGCATATTTTCATAACTG 331814 36 100.0 30 .................................... GTAGTTCGGTGATTTCAGAATTTTCGATAG 331748 36 100.0 30 .................................... AATTATTGGTTCCAAGGCAAGCTTCCCGAT 331682 36 100.0 30 .................................... GCTAAGAATATGGTTAGCGCTGCAACTATT 331616 36 100.0 30 .................................... CATCAATAACAAATGGGTAAAGGTGGGATA 331550 36 100.0 30 .................................... TTGTCAAAGAGGTAAAAGAATCTGGAATGA 331484 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 22 36 99.9 30 GTTTTAGAAGGATGTTAAATCAATAAGGTTAAACCC # Left flank : TAGTGATGGTGCGAGTGAAAAATATAGTTCTGGAATTTACAAGCAACTTGAAGCTGTATTGACTGATGATCAGCGTAAGTCCATAACTGACATTAACAGCCAACTGTATACCTGTGTTCAGAAATGCTTATTCATGATTGATCTACCTTTGGAAGTTACCTACGATTGGGATTTGAAGAAGCTGTTCAAGTACTGCAAAATTCACTTTAATGCTGATACCATGCAGAACCCATATGCTATAATTGAATCAATTATTAAAATTCATTTGGAGTGTGGATTGAAGTCTGCAGTTGGTCTAACTAATGTCGCTCATTATCTTAATCAGCAGCAATTAACTGACTTATCCAAGCTTACAAGTTCCACAGCAATCTCGACATTATTAGTAGAATTCACAGATATGAAGTCACAGGAGCTTTATACCAATTGCGATTTCTACTACATTGACGAGGACTTTGTTGATTGGCATTCATAACACATTAAAACCTGGTTATAAAAAATCG # Right flank : AAAAAGTTGATGGCTAAGTTTGGATTGAAGTCAATATTTGAGACAGGTTTTAAGAGACATTCAGAACCGCGTTTACCTTCCACAGCTCAAATAAATCATTAATCGCAATTAATAACTTATTTGAACCCTGGAAAGCATTAAATCAGGCGGCCATTTGGCTCGTAAGTGTTGCGATTTCAACTTGTAAAGGGGTCTGGTAGCCCAGTGAACTATGAATTCTCTTCCTATTGTAGAAAGCATGCACATATTCAAAAAGGACAGCAGCGGCAGTTTCATAATCTTCAAAGACCGGCACTGGATAAACACATTCCTTTTTGAGGGAAGCATGAAAAGATTCCATTGGCGCGTTATCATACGGACAACCCTTACGGCTGTATGAGTGGCAGATATGTAGTTCTGTTAACCGTTGGTTGTAATCATCGCTGGTGTACTGTGATCCTAAGTCTGTGTGGATAATCAGGTCCCCAGTAATGGTTCGATTTTTAACCGCGCTTTCCAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGATGTTAAATCAATAAGGTTAAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //