Array 1 247961-245418 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASES01000025.1 Acinetobacter baumannii TG02011 NODE_16_length_303082_cov_19.630693, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 247960 28 100.0 32 ............................ AACATCAGGCGTACTTATATCGGGTGTCTTCT 247900 28 100.0 32 ............................ AGTTGTCGTTACCAATAGCGGTAAGGTTTCTC 247840 28 100.0 32 ............................ GCTACTGACATTAGCCAGAAAGTCCAGAATCT 247780 28 100.0 32 ............................ TTGTTGTCATGCAAGTTCTGCAAAAATGCCTT 247720 28 100.0 32 ............................ TCCAGAACTAGCTCACTTAGAACGCAATGCTA 247660 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 247600 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 247540 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 247480 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 247420 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 247360 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 247300 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 247240 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 247180 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 247120 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 247060 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 247000 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 246940 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 246880 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 246820 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 246760 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 246700 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 246640 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 246580 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 246520 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 246460 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 246400 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 246340 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 246280 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 246220 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 246160 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 246100 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 246040 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 245980 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 245920 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 245860 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 245800 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 245740 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 245680 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 245620 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 245565 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 245505 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 245444 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 43 28 98.7 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : GAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGCA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 253051-258240 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASES01000025.1 Acinetobacter baumannii TG02011 NODE_16_length_303082_cov_19.630693, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 253051 28 100.0 32 ............................ TGCTGTAAAGTCGCCTTCATTCTCAGTAGCAC 253111 28 100.0 32 ............................ ACAATCTTTATCGTCTCGAGAGCTAGCAGAGA 253171 28 100.0 32 ............................ ATTTATGAAGCTCGTAGAAATCGACTTTTCCC 253231 28 100.0 32 ............................ AGTAGTAGGAATTGCTTGAGATTGGTTTAATT 253291 28 100.0 32 ............................ TTAATCGGCTGTAGATTTTTATTGATCAGAAT 253351 28 100.0 32 ............................ TTTATGAACTCATAGCATTTCAGAAGGCAAAT 253411 28 100.0 32 ............................ TAATGCACCGCCTGCACCTGACACATCTGAAA 253471 28 100.0 32 ............................ CAAGAGAACCCACCCCAGTTTTTTCGGTAGTT 253531 28 100.0 32 ............................ TTGATGGAAGCTTTTGGGAAATAAATGACCCA 253591 28 100.0 32 ............................ TGAATATGTTAAAAACTTGCCATATTGGCAGA 253651 28 100.0 32 ............................ TAATAAGCCATATGATGTTGATGTAAGCCAGA 253711 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 253771 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 253831 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 253891 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 253951 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 254011 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 254071 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 254131 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 254191 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 254251 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 254311 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 254371 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 254431 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 254491 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 254551 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 254611 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 254671 28 100.0 34 ............................ CCTGAAAAATTTCACTGTGTCCATTTCGTTATTA 254733 28 100.0 32 ............................ TATGTCTTTAAATTCTGAAAAAACACTTGTTC 254793 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 254853 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 254913 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 254973 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 255033 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 255093 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 255153 28 100.0 32 ............................ TTGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 255213 28 100.0 32 ............................ TGGTACGACAACTACGAAAAGCTGAGCAAAGT 255273 28 100.0 32 ............................ TCAACTTAAATGGATGCTCCCCGCGGTGAATT 255333 28 100.0 32 ............................ TTGATTGCTAGACGGATTTTTAGGCAGATCAT 255393 28 100.0 32 ............................ GAGTTTAATGCGCTATATGGCGACGAGGATTT 255453 28 100.0 32 ............................ CATGCAATCGCGTTGATTACCGCAGCTTCGAA 255513 28 100.0 32 ............................ ATGAGCCGCAACCATACGGTCTATGACTTCCA 255573 28 100.0 32 ............................ ATAGCGCCCTGCTCTATGTTGTCACTTCCGAA 255633 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 255693 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 255753 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 255813 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 255873 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 255933 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 255993 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 256053 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 256113 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 256173 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 256233 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 256293 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 256353 28 89.3 32 ....T.......AT.............. TGTTTCAAAAGCTACACCATCAAAACCATTGC 256413 28 89.3 32 ....T.......AT.............. TATTTAAGTAATAAGTTTAATAACGACCTAGT 256473 28 89.3 32 ....T.......AT.............. AACACGTTCTCTATATCGCTGTTTGCGGTCAT 256533 28 89.3 32 ....T.......AT.............. TTCAGTTGGATATGCCTTTGATACCAAGAAAC 256593 28 89.3 32 ....T.......AT.............. GCCTGCAGACACGGATTTACGCAGCTGATCGA 256653 28 85.7 32 ....T.......AT...........C.. TAACCAAACTATGTCATCGATCGGAGATTTCA 256713 28 89.3 32 ....T.......AT.............. TTAAAATAAATGCCTGTGGTTTTTTCTTAACT 256773 28 89.3 32 ....T.......AT.............. AGTTTCCGAAGTTGAATTACACTCGCCAAGTT 256833 28 89.3 32 ....T.......AT.............. TAACACAGTGATTTGATTACCTTGAGCAACCC 256893 28 89.3 32 ....T.......AT.............. ATCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 256953 28 89.3 32 ....T.......AT.............. TCATCCACCTTTGATGAAACGGATCCACGCAA 257013 28 89.3 32 ....T.......AT.............. TCTTGTGTGACGGCCTCCACTCCAGATCCCGC 257073 28 89.3 32 ....T.......AT.............. TTAAGCTTCAAAAATAGCCATTGATTATAAAA 257133 28 89.3 32 ....T.......AT.............. TGACAACTTTCCACGGCAATCAGGGCTTTCCA 257193 28 89.3 32 ....T.......AT.............. TAAAGATGCACGTGGCCTAATGCAAGTTATTC 257253 28 89.3 32 ....T.......AT.............. TTTAAAATTAGGTGCTGAGTTACCACGGCTCA 257313 28 89.3 32 ....T.......AT.............. TAAACCAAGAACTTGAAGATTTTGATGCTTAT 257373 28 89.3 32 ....T.......AT.............. TAAAAATAGTGTGTTAATTATTTATGATGAAA 257433 28 89.3 32 ....T.......AT.............. CGTATACATGCACATCAATACGATATCCCGAT 257493 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 257553 28 89.3 32 ....T.......AT.............. TGCAGCTACTCGACATGTTGGTAGGGCAGATG 257613 28 89.3 32 ....T.......AT.............. CAGTCGGCTGGTGCTAATTGAATAAAATCGTT 257673 28 89.3 32 ....T.......AT.............. AGATTGAGGCGATTTTTATCGCGGACATTGCC 257733 28 89.3 32 ....T.......AT.............. CAGTCCCCGCTTTGAAGCATTCCCATCAGTAC 257793 28 89.3 32 ....T.......AT.............. TCACAGCTATCGTCTGGCTGCCGTCGCGTAGA 257853 28 85.7 32 A...T.......AT.............. TTATTATTAAACGGGAAAAGTATATTCTTGCT 257913 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 257973 28 89.3 32 ....T.......AT.............. ATCATCAATAAGTTGGCCTTGATTTAAATAGT 258033 28 89.3 32 ....T.......AT.............. AGATACAAACGAGTTCGCATCTCGACCAGAAG 258093 28 89.3 32 ....T.......AT.............. ATTATCCAGATAAAACCATATCTACAAAGTGG 258153 28 89.3 32 ....T.......AT.............. TCAACCTGAACACAGACATACATGTTCTATTG 258213 28 78.6 0 ...GC.......AT..........AT.. | ========== ====== ====== ====== ============================ ================================== ================== 87 28 94.7 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : ATTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTA # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : GTTCTTCATCGCATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //