Array 1 1507524-1506834 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018624.1 Clostridium chauvoei strain DSM 7528 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1507523 30 100.0 35 .............................. TAATTGAAACTAGTATCACTGATTCTTTTTTTCTT 1507458 30 100.0 36 .............................. AAAGGATTTCTTGTTCCGTATTTTTTAGATAAATTA 1507392 30 100.0 37 .............................. GGCACTTGGTAAAATATACCTTTTGCTTAAACTCTGC 1507325 30 100.0 35 .............................. TAAAATACCACTCTTCTATTAATCTTTGGCTTGTA 1507260 30 100.0 37 .............................. ATCTGCTTAGGATAGTCTTGTGTTTCTTCAAAGCTAG 1507193 30 100.0 36 .............................. ATTGATGGAATGGTTAATTGATTATAAGAGATTGAA 1507127 30 100.0 35 .............................. CTTATCCATCTGCCCATACCAGTTATACCATTCCA 1507062 30 96.7 36 .......................G...... ACATATTTAACTTTCAAAAGCAACTGATTGCAATTC 1506996 30 100.0 37 .............................. ATGGTAGGCAATATATTTGTTGGAACTTATACTAAAG 1506929 30 100.0 36 .............................. GATTTATAGTTTTGACTATGATGATGAGTATATATA 1506863 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 99.7 36 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : CCTGGTATAACAATTGGAGTAACCTTTCAACATTTTTTGACTTCTCTCCAACTATAAGAAAGATGATTTATACTACAAATATCTTAGAAGGTTTTAATCGTCAAATACGTAAATTCACTAAAGTTAGAGTCATATTCCCAACTGATGAATCTTTAAATAAGTGTGTTTACTTAGCAACAATGGAGATACTAGAAAAATGGACTCAACCTATACATAATTGGGGTGCTACGCTAGCGGAGCTATCAATAATATTTGAAGATCAATTAAAAGATGAATTAGCTTAAAAGCTTGTACTTTTTATAAATTATATGCATACTATTAGATTTTTTTGAAATACTAAAAAAGGTAATAAAAAACATTATTAGTATTTCTTAAATATAAAAAAATATTACTGGAAATGAAAATTTCCAGTAATATTAAAATAATAAAAATGATAATTACACAGAATTATCTATTCTCTCAAATATCCTAACAATTAAGTATTATCTCTTATTCCCCTT # Right flank : ACAAGGCAATTTGAGTACTTGAGTATACCCAATTTGATAGACACATAGAAAGTACGTATAATAATAATTAAGAAGGATGTGTTTATTAAATGGGAAACCAAAGAAGATTTACTAAAGAATATAAAGAAGAAATAATTAGGCTAGTAACAGAACAAGGTAAAAAGGTTTATGTTGGTGATATTACCTATATAAGTACTGAAGAAGGCTAGTTGTATTTAGCTACTGTAATTGACTTATTTGATAGACGTATTACAGGTTGGGCAATGGATTCTACTATGACTAGAAGACTAGTTATAGATGCCTTTAATACAGCTGTATTAAAGGATGTTGTTATGATAATGCTTGTGCAGAATTATTCTTCTTATCTTTAAAGAAGCACTTTCTTTATGGAAGAAAATTTAAAACGAGAGCGGAATCAAAACAAGCTATAGTTGAATATATTGAATTATTTTATAATGCAAAAAGATTACACTCTACCTTAGGGTATAAGTCACCAAGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 1511285-1509087 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018624.1 Clostridium chauvoei strain DSM 7528 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1511284 30 100.0 35 .............................. AGATAACAACTGGAGAATAAAACCTATAGAAGAAG 1511219 30 100.0 37 .............................. AAATTGTGTTCCGCCGGGTGCAAAATTCCCTTATATA 1511152 30 100.0 37 .............................. CAGGAGTCGTTGTATTTGATGAAATACATGAATATGA 1511085 30 100.0 36 .............................. AAAGGAGAAATATATAGAGTTGATAAAAAAATATTT 1511019 30 100.0 36 .............................. ATTCTCCTAAAGATGATAAGAATGAATCTTTTAATG 1510953 30 100.0 36 .............................. AGATAAGCTAGGTAGTGACCCTGCTGGAAAATTACA 1510887 30 100.0 36 .............................. GCTGAATCTGGTGAGGACAATGTTGATATAACAATT 1510821 30 100.0 36 .............................. TTTGTGCAATACTATAGATATAGCAAGTGCAAGTTC 1510755 30 100.0 36 .............................. CATCTGACACTAATAAAATAGAACTAGAGATTTACA 1510689 30 100.0 34 .............................. CCTTCTGATGATATAACATTTGCTATAAGTTGTG 1510625 30 100.0 36 .............................. GTTAAAAATTTTCACCCACAAGGAACTTTTATACAA 1510559 30 100.0 35 .............................. AGTGAAAAAGAAAAGGAAATTAGAAAGAAAATAAG 1510494 30 100.0 35 .............................. AAGTCAGTTTATGTGTGGATTAATCCAAAAGCATT 1510429 30 100.0 36 .............................. TGGACTTTCCTCCCAAGCTTATTATTTTTTAAAACA 1510363 30 100.0 36 .............................. TTGTTAGCTTTCTGTATTTGCAAATCGCATATAATT 1510297 30 100.0 35 .............................. AAATTTGGAGGGATAATTTAAATGGGTATATTAAA 1510232 30 100.0 36 .............................. CTTTTAACATATCCCAATCCTTGATAACGAGAATAC 1510166 30 100.0 35 .............................. GATGCTTTGAAGAAGTTAAATGATGAAGAGAAGTT 1510101 30 100.0 36 .............................. TAGATTGAATGAGCATAAAAGCTTTTACTGTTTAAC 1510035 30 100.0 35 .............................. GTACAAGTGCAAGAATAAAGAATAGTGGAAAGGAA 1509970 30 100.0 36 .............................. TATATTATTTCAGCTAAATCTAACATTCCCGTATCA 1509904 30 100.0 37 .............................. GTAAGTAGGAGGATAAAGAGAGCTATAAAACATTTAA 1509837 30 100.0 35 .............................. ACAACTTACGAACTAGCTAACAAAATAAGCGGGGT 1509772 30 100.0 36 .............................. TTAAAGTTTCGGTTAGCTACGTCCATATTTTCCCTG 1509706 30 100.0 36 .............................. TTTGAAAGAGGTGTATTAATATGCCTATTTTTTTAT 1509640 30 100.0 35 .............................. GAGCAAGAAGAATATAGTACATCAAAAAATAATGA 1509575 30 100.0 36 .............................. TACTTAGGGTTTTCCTCATAACACCCGATATGGTAT 1509509 30 100.0 35 .............................. ATTCTTTGCTTTTATCTCTATATTTAACTATCTCT 1509444 30 100.0 36 .............................. CAGAAAGGCTAGGAATTCTAATAAAGAGTACGATGA 1509378 30 100.0 36 .............................. ATTGTAAATCAAGTGAGACCTTTCCCAACACCGGCT 1509312 30 100.0 34 .............................. AAAAGGAGCTGATGGGAATCAAGGACCAATTGGA 1509248 30 100.0 36 .............................. TAAGGAAATGTACAACAGTATAATTGGTAAAATGAA 1509182 30 100.0 36 .............................. GGTAGAAAATAATGATGAAATAAAATATTGTTTTTA 1509116 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 34 30 100.0 36 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : ATAAAACCTTTTTACCATTTAACTTAAAGGATGGGATGTAAATTGAAAAAACAAATTAATTATAATTACGTATTTATATTTTATGATATAAAGGAAGAACGTGTAAATAAAGTATTTAAAGTATGTAAAAAATATTTATCACATTTTCAAAAATCAGTATTCAGAGGAGGAATAACTCCTTCAAAATTAATTTTATTGAAAAAAGATTTAAATAAAGTTATAGAAAAAGAAGAAGATTTTATATGTATTATTAAACTTTTAAATGGGGATGTTTTTGGAGAGGAAATAATAGGAGTTCAAGGGCAAACAACAGGAGAAAGTTTAATAATATAAAATTACCAACCTAATAATATAGGTTAGAGCTTTAAAATACTACGGTATAAGTTATTTTTGTATTTAACTTTTATTTATAATAAAAAGCTGGTAATATATTTATATAAACATTATAAAATGGGCGTTGCATAGATATATAGTTATAAAAGAACTCTCATTTTTCTAAG # Right flank : ATCCGAGACAGTAGATAGTTTTGTGTAAAAACAAAACTATCTACTGTTTTTTGTATTAACAGTTGGAAGTTTTGGAATAATATACTATATAAATTAGGAGAAATTATTCTGACAAGAAAAATTGATACCAACTTTGATTACAATGAGGAAATTAAAAGATGCAAAACAATCGATGATGTAATGGGTAAAAACGGATTAATACAAAGATTAGTTAAAGATGTTCTTGAAAATATATTAGAAGGTGAAATGGAAGAACATCTAGGAAGAAATAAATATGAACGTGTAGAAGCAGTTGATCAAACTAAGAAGAACTACAGGAATGGTTATAGTCGCAAGAATTTAAGAAGTTCCTTCGGTGACGTCGACCTAGACGTACCCCGTGATAGAAATGCTGAATTTGAGCCACAAATTATAAAAAAATATGAAACCGTGTGTACTGAGTTAGATAAAAAGATTATATCTTTATATGCTAAAGGTATGTCAACATCTGATATTCAGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //