Array 1 18332-16908 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOVQ01000001.1 Lactococcus nasutitermitis strain NBRC 111537 contig1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 18331 36 100.0 30 .................................... TCTTTCTTTATCTTCCCCAGCTAAAGGTAC 18265 36 100.0 30 .................................... CACCTCCACGAATGGGCGAGTGAGCGGGTT 18199 36 100.0 30 .................................... TCACTCAAACAACTACGCTTGAAAACATTA 18133 36 100.0 31 .................................... CTAGCAGCGATTTTCTTGTTTGTTGCATATG 18066 36 100.0 30 .................................... TGATAGATTGGTTCGCTTTAGGTTTCATAG 18000 36 100.0 30 .................................... AAATATTGATTAACGACGGGGATAGCAACA 17934 36 100.0 30 .................................... TGCCCCCAACCAATACCAGCTTGTTTAATG 17868 36 100.0 30 .................................... CCAGATTCACTTTGTACTTGTCTTAACCAA 17802 36 100.0 30 .................................... CACCATACTTACAAGACCCTACACAAGCAA 17736 36 100.0 30 .................................... CGGTTATGATTATTACTGGTTATATGTTGC 17670 36 100.0 30 .................................... TCTTCAAATCCGCCCTCAATTCCAAACTGA 17604 36 100.0 30 .................................... GAGCAGGTCGTGAACCTGTTGTTAGAGTTT 17538 36 100.0 30 .................................... TGTCAACTTTTGGATCAATGGCTCTTATTA 17472 36 100.0 30 .................................... AAGAAGATAATACACAAGTTTATGACCTCA 17406 36 100.0 31 .................................... CGAACCACAAAGCATTTATAGGGACATTATT 17339 36 100.0 30 .................................... ATAACCTAATAAATTCTTTTTCACTTTTGC 17273 36 100.0 30 .................................... CAAATCCACAAAATGGCCAGTTATTAACTG 17207 36 100.0 30 .................................... GACCGCGTTGACGGTAAGGTTCAGCAGGTA 17141 36 100.0 30 .................................... TCAAGAGACAATGTTTGAGCTTAAGATTCT 17075 36 100.0 30 .................................... TTACAATAACATCATCAGCTACTGCTTCAA 17009 36 100.0 30 .................................... ATGACGAAGCACTATATATTGAAAGTCCTT 16943 36 91.7 0 .............................A....GT | ========== ====== ====== ====== ==================================== =============================== ================== 22 36 99.6 30 GTTTTTGTACTCTCAACATTTTCCTATCAGTAAAAC # Left flank : TTTAGTCAATCCTGCAAGTTTTTTGACATCAGAGCGGATTCAATTTCTTTTGGAAAGTCTGGAACAAATAGCAGAAGAAACAGGGCTTTTGAAAGTTTGGATAATTTCTAATCAAGTACTTGATTTTCCTCATCAACTTTCTGATATTTCTGGAACGATTATCTTGGCATCTGATGCTTATCAGATGCCAGAATTCTCGGATTTTAGAAAAAGTATTGAAAATCATTATCCTGAAAAACTGGAAATGACAGATGAAGTACTCTGTCAAAAATTTTATGAAATTGTTTCCAACATTGGTATAAAGCCATCTATTACTGGAAAAGCGAGCCGAAATATGGTATTATTGAAAGTGATAGATGAACTTTTGGGCTTTGATGATTTGCCATTTTCCGTCAAATTTGACGAACTCTCGACAGCCGAAAAATCATATCTCCTCTCTGAAAATTGACGAATTTTTTGAGAAAAAGGTGACTTTGTGGAACAAAAATTTCTAATTTGAG # Right flank : AATTTATATTTAGCGAATACTCAATTCTATCAAAGAATTGAGTATTTTTATACATGAAAACGTATGTTTATTAACTTTTTCCTTGACAAATATGCGCAAAAGAGTATAATGTATAAATATACAGTTTAGGAGTGAATAAATTCTATGAAAAAAATTACGATTGTTGGGATTACAGGTTATAGTGGGCTAGAGTTGTTTCGGTTGCTTAGCTTTCATGCAGAAGCAGAGGTTGTCGCTGTGTGTGCAACGTCACATATTGGAGAGAAATTAGCAGATGCTGTGCCGCAATTTGAAGGATTGACGGAACTTGTGATTTCAGAATTTGATGTAGATTTAGCGATGAAAAATTCAGATGTTGTCTTTTTTGCGACATCAAGTGGTGTGTCGTTAAAATTGGCTTTACCACTGATTGAAGCAGGTTTTCCTGTGATTGATTTATCGGGAGATTTTCGTTTGAAAAATCCAGATGATTATGAAAAATGGTATAAAAATACAGCGGC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAACATTTTCCTATCAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //