Array 1 51736-54231 **** Predicted by CRISPRDetect 2.4 *** >NZ_NNGU01000066.1 Vibrio parahaemolyticus strain F1_2 F1_2_contig066, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 51736 28 100.0 32 ............................ TCACAGTAGATGATGAAACAGCGTTAGATCCA 51796 28 100.0 32 ............................ AAGCGAGAAAGACACAGATGCAGCGGAGCAAA 51856 28 100.0 32 ............................ CCACAAACCCGTCGGCAGTCCTGGCACTGTTA 51916 28 100.0 32 ............................ AGCCGTTGACGTTTTGACCGCTTCAATGTCAA 51976 28 100.0 33 ............................ GAATACGGAAACCGGCAAAGCCTATGCACCTCT 52037 28 100.0 33 ............................ GGACTAATGATTAAGGTTCGCCCGGACATTGAA 52098 28 100.0 32 ............................ AAGCTAATAGAATGCGCTCAAAACGCCCTGTA 52158 28 100.0 33 ............................ GAGTTCAGGGTTTAATGAGGGATGGAGTACTAT 52219 28 100.0 32 ............................ GCAGCGGCGTTTTGCTTCCACTGGTTGCGCAA 52279 28 100.0 32 ............................ GCAATGAAGCGTTGAGATTTGCCTTGCAAGTA 52339 28 100.0 32 ............................ TATCGCCTCATCCATGTCCGCAGCGGCGTTTT 52399 28 100.0 32 ............................ AGAGTCCCCAGTAATCGCAACCGGATACCCTT 52459 28 100.0 32 ............................ GCCAACTATTGGCGAGAGCAAGACAACTGGGT 52519 28 100.0 32 ............................ ATTCACGAATATCGCCCATTTGGGCTATGTCC 52579 28 100.0 33 ............................ TTCGATAAAGGCAGTTTGGGAATAATTGTTTTT 52640 28 100.0 32 ............................ CTAAAGTGTTATTGCGTGCAAGCTTTGTTACA 52700 28 100.0 33 ............................ ACAAGGTAACTTGGCGGCTATGGCGACCGTTGC 52761 28 100.0 32 ............................ AGACTGGTCTTGAATTAGCGCATCCAAATTGA 52821 28 100.0 32 ............................ AACTCGACCTTACCGACACTGCTTTCCTGCGG 52881 28 100.0 33 ............................ GTAAAAATGGCGCAACTATCCTAACAATATTCA 52942 28 100.0 32 ............................ TTATCAGTATGTTGCGGTTGGTCTTCCTACTG 53002 28 100.0 32 ............................ AGCCGCTGCCGCTGCCACCGCCTGTACAATAG 53062 28 100.0 32 ............................ CACGAAAGATTTCGAGTGGGAATTAAATAATC 53122 28 100.0 32 ............................ TGCCGCGCCTGTTTCCTCGTAACTAGCGCCAG 53182 28 100.0 33 ............................ TTTAGAAAGCGCGCGCGGCACTTGTCCAAATTT 53243 28 100.0 32 ............................ CATCCACTTGTCAGCAGTAACCGCGCTTCCAC 53303 28 100.0 32 ............................ AATTTGAAACCGCATCATTAACTTGCGTCGAT 53363 28 100.0 32 ............................ AGCCGCCATCTGCACTAGGATTATTATCTCTA 53423 28 100.0 32 ............................ TTTCGGTTCTTCGTTTTGGGGGCCTGTTGTTG 53483 28 100.0 32 ............................ GTCACTATCAATCAACTTCGTCAAGCGTTCCA 53543 28 100.0 32 ............................ TTCATCCATATGAGGCATTAAACAATAGTTGT 53603 28 100.0 32 ............................ AACTTGAACGCGCTCACCTGGTGCTGGTTCAA 53663 28 100.0 32 ............................ TAATACCCCACCTAGATTAGCAAATACCCCAC 53723 28 100.0 32 ............................ TTTCCGTGCTTATAATCTCATTTACAATGAGT 53783 28 100.0 33 ............................ TCCGCGACCAGTCCAAGTACCAGCGACATTTTT 53844 28 100.0 32 ............................ ATGTAAGCATTCCATGCTTTTGACCCTTTAAA 53904 28 100.0 32 ............................ AATAATCGGCGATTTAATCGGCATGATACCTG 53964 28 100.0 32 ............................ TCGCAATGGCACGGCTAATGAATCCGAATCTA 54024 28 100.0 32 ............................ ATTAACTCACAGCTGCAACACCAATATTTTGA 54084 28 96.4 32 .............C.............. TGCCCGTTGTTGTAGCGTTGACCATGCATCTA 54144 28 92.9 32 ..........A..C.............. GCCACGCGATACAGTGAGAACAACGGCCAATC 54204 28 85.7 0 ...A......A..C............G. | ========== ====== ====== ====== ============================ ================================= ================== 42 28 99.4 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GAACGATGTGACTTACGTTAGCTTTACTCGGAAACAAGTCAAATCCCCTGAGCGAATTGAACGCGATATGCAGAAAAAAGCGGAGCTTTGGGCGGCTAAATCTGGCAGGTCATTACAAGAGTGTCTTGTGGAGCTGGAAAAGACTAAGCCGACCTCGCTCTGTCCATTACCGTTTATCTATTTACATAGTCAACAAACCAAACAACGTTCACCGGATAAGAGCAGCAAATTTCCGTTGTTTATTGAAATGAAAGCTATCGGAGTAAAACAAGAAGGTTATTTCGACTGCTATGGGCTGAATTCCAAACTTAATCGGCAAGATTGCTTAGGGACTGTTCCGCAATTTTAATCAATAAAGGGTAAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATAGGTATAAAATACAGCTAGTTACAATAGATAGATTTTGACAAGGTAAAAACATGATTTTTATCCTATCTATCTGTTGTAACTTTCTTTTATTGATTTATTCTGTT # Right flank : GGCTGAAACGGTGTCCTCAAGTGTAAGCTTTATTCATATCGAGAGCTTTACGCTAAGTCGTAAAATTTAGATTTTATTCTCATAATATTTAGCCAAATAATTTCCTACATTAAGTTTAATAATAACCTTACTTAAAGGTATTTTTTATTTTCCATGTAGGGTAATAAATTTTTTGAAGTGTTACGAAAATCCATAATTATTCATATTTAATTTAATTTAATTTGCCAAAATTTAACAAAAAACAAAAGTCAAAAGATATGATTGCTTGGAAATAATCGGTGAATAATGCATAAATTAATATTATGTGTATTATTATTGAAATTAATGATTGAAGTGTATCGTCTCGCGATAAGGAATAAAATAGTGTTGTGTAATGTTTGTAAATTGAATTATGACAAAACTATAAGGCTAGGTAGGATAGCCATTTGTGATGAATGTTTGATTTCTGCAAGTGATTTTTATAAAGAGCATAGTCATGAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //