Array 1 905782-912459 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP079096.1 Methylococcus capsulatus strain BH chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 905782 28 100.0 33 ............................ GCTCCATTCTGCCAATTTCCTCGGCCTTGGCGC 905843 28 100.0 33 ............................ CTGGTTCGGGTCGATCGGGTCCATCATCGCCGC 905904 28 100.0 33 ............................ CGAGACTCGATGTGAGATACCGCTTCCGTCCTC 905965 28 100.0 33 ............................ CCACCAGACCAGGCTTGGTTTTGTGCTTGTGCC 906026 28 100.0 33 ............................ TGCAGGCCACCCTTGCGTCGTGTTGCCGACAGG 906087 28 100.0 33 ............................ CCACTCCGGCGAAGTCCAGCACCAGGCAGTGGT 906148 28 100.0 33 ............................ CGATACACGCCACTATTGACGTGTCAACCCTTG 906209 28 100.0 33 ............................ CGATGGAGCTTACCATCGAGCAGTATCTGCTCT 906270 28 100.0 33 ............................ TGGTGATTGGCTCACCAAGCTGCTTTTTACCTG 906331 28 100.0 33 ............................ CCTTCTGACGGCCCTGCCTGAACGAACAAGTTC 906392 28 100.0 33 ............................ CCGTCGGGCCGTCCCCGGCATGTCGGCGGATAT 906453 28 100.0 33 ............................ GTTCACCCAGCCGCAGTTCATAGGCATCAATGG 906514 28 100.0 33 ............................ CCATGGACATCGATCGGGCGGATAGGCTGCGGC 906575 28 100.0 33 ............................ CTAGGGTCGGTGCTGATCGGCTCTGGCATGCGG 906636 28 100.0 33 ............................ CGGCCTACAGGCGCGTTGTCGCTGGCAATTCGA 906697 28 100.0 33 ............................ TCGTTGCCAGACCACACAATCTCGTCGCCTTCT 906758 28 100.0 33 ............................ GCTGGGGCATGGGTGCCGTGGCCATCTGGCGAC 906819 28 100.0 33 ............................ TGCGACAGGCGGCGGCGGAGGTCATGGCGGCGA 906880 28 100.0 33 ............................ CTAGTTACGGTGTCAACACCTAGTTTTAGGTCA 906941 28 100.0 33 ............................ TTGATGTTTGCTATTGCCAAAATCTTTATCAGT 907002 28 100.0 33 ............................ CCGACCCCATCAGCGCAAGCAAAAGAACCAAGC 907063 28 100.0 33 ............................ CCCACGGTGAAGCCGGAGACGTACCAAGGAGAA 907124 28 100.0 33 ............................ GGTTTATGCCATCGCCCGGATGGATGGATCGGA 907185 28 100.0 33 ............................ GCGGTAGTGGTACGGGAAGCGGTAGTGGTACGG 907246 28 100.0 33 ............................ CCTGGTTGACAAGACCTTCGTGACAACCAAGCT 907307 28 100.0 33 ............................ GCATGACCGGAGGTCCGCGCTTGGTGGTTACGA 907368 28 100.0 33 ............................ CCGGTCGATGTTGGGCGTAGTCAAGACCATGTC 907429 28 100.0 33 ............................ GATCGGCCTTTGTTCGTCCACGCTGTACCTGGG 907490 28 100.0 33 ............................ GTTCTTCGATACGACTTGGGATTGGCTGACCGA 907551 28 100.0 33 ............................ TTGATCAGTCGCGCTAAAAGCCGGCTAATCCAG 907612 28 100.0 33 ............................ CTCCTTCCGCCGGCCCGGTGCCCCTACGCGCAC 907673 28 100.0 33 ............................ GTCCGCCGTCAAGGTCAGCCACGCCTTGCCGGA 907734 28 100.0 33 ............................ TTCCCCTCGATGTGCTGCTTGAGCCGGGGAAAT 907795 28 100.0 33 ............................ CGACTTCTTCGCCGACGCCAGCAGGGCCGCGGC 907856 28 100.0 33 ............................ CCTGACGACGCCATTTTCTCGTACCGGCACGGA 907917 28 100.0 33 ............................ GTCTCGGTCGGTGGTGCGGCCTCTTGTCCGTAT 907978 28 100.0 33 ............................ TGATGATGCGCCTGCTTTCCCGTCCGTACTGTA 908039 28 100.0 33 ............................ TGACGCGCCAGGGCGGCGGCTGGCCGACGAGGC 908100 28 100.0 33 ............................ CGAGTCTGGCGGCCTCGGGCCTCTGGCGCTGCC 908161 28 100.0 33 ............................ CTGGCCGCACACTCTCAAGATCGGCCTTTGTTC 908222 28 100.0 33 ............................ GATGGAGCCGGAAATCGCCCCGGCCAAACCCGA 908283 28 100.0 33 ............................ CAGCAAAACCAAAATCCGGCACTTTGTGACGTA 908344 28 100.0 33 ............................ CTGACCCGGTAGAGTCCGTCATATGCCGGCGCT 908405 28 100.0 33 ............................ TCATGACCGCACTCGGTCAACTCCTGATCGCCC 908466 28 100.0 33 ............................ TCATGAGACCACCTTGCCGAGCTTCGGAATCGC 908527 28 100.0 33 ............................ CCTGGCTATGAGGCGGACAAGCGGCCTGACGGC 908588 28 100.0 33 ............................ CCCTTTGATTTATTGGTGGGCCATGTAGGGATC 908649 28 100.0 33 ............................ CGTCCCTGGGCGGCCCGGCGTATGGGCAAGGTC 908710 28 100.0 33 ............................ TCTGCGCGAGGCCGATCTACATGGCGCTGATTT 908771 28 100.0 33 ............................ CGAGCGCCTCAACGCCCAGATCGAGGCCATCAA 908832 28 100.0 33 ............................ TTTTCCTTATGGATCATAAGGGCGTGGGACAGA 908893 28 100.0 33 ............................ CCAGGTCCGGAACTCGGCTTCGGCGTTCGCGGC 908954 28 100.0 33 ............................ TTGGCGTCGATGTCGGCGCCGGTGAGACCCGAT 909015 28 100.0 33 ............................ GGATGGCCTGATCATCCCCGCGGCCGCGGCGAC 909076 28 100.0 33 ............................ CCGGGAGATATCCCTCATCCAGGCTGTGCAGTC 909137 28 100.0 33 ............................ CGAAGACGGCTCCCAGACCACGCTGCAGGAGGG 909198 28 100.0 33 ............................ TTCGACTACTACGACAGCAGCGAGAAGACGCTG 909259 28 100.0 33 ............................ CGACCAGCGGGGCCGACTGCATCATCAGGTAGC 909320 28 100.0 33 ............................ CAGTTCAGACTGAGCCGGACCAGGGCGATCGCG 909381 28 100.0 33 ............................ CGTGGCCAGTGCCTTGTCCTCCGCCATCACGCC 909442 28 100.0 33 ............................ TCATCCGGAGTGCCGATGCAGCCCATGACGATG 909503 28 100.0 33 ............................ TCAATAATTGCCCGAGTGCGGTCATGCCTAAGC 909564 28 100.0 33 ............................ CACCTCCCCGCGAAGATACGCCCGACACCACGA 909625 28 100.0 33 ............................ TTCGCCCCGCCCCGTTGGCACTTGTTCGATAGT 909686 28 100.0 33 ............................ ATAGAACGGCTGAAAAAGGAGGGCGACCTGGTC 909747 28 100.0 33 ............................ CTGTATTGGTCGAACACCTTTTTGGGCAGCCGA 909808 28 100.0 33 ............................ GCACGTGCGGTAGTCGCCAAAATCGAGGGATTT 909869 28 100.0 33 ............................ CCATGAGCGCCCGTCGGATCGTATTGGCAACTA 909930 28 100.0 33 ............................ CTAGTATCGGGGATCGTACTATCCACCGGAGGC 909991 28 100.0 33 ............................ CCTTCCACTTCGCCTTGATGGCGAGAGGCACCA 910052 28 100.0 33 ............................ TGATCCGTACTGTCAAACGGAGGACCTATGAAA 910113 28 100.0 33 ............................ CATCGACCGGTTGCGGTCCGATGTTCGTCAGTG 910174 28 100.0 33 ............................ CGACCTTGATCGGCGGCCGCCAGACCGGGCCGC 910235 28 100.0 33 ............................ TTCACGCCATTGCCCGTGCATGAAGTCCACCTT 910296 28 100.0 33 ............................ CGCACGATCCTGTAGCCCTGGGCCGGAACCCGG 910357 28 100.0 33 ............................ GTTCTGTTTCCGGTTTATTCCGGGGATGTGATC 910418 28 100.0 33 ............................ TCAAGCGGAACATCCGGCCCATAAGGCCGAGCA 910479 28 96.4 33 ........T................... CGTAGTCGGGGCGGAGTTCGCCGGTGTCGCGGT 910540 28 100.0 33 ............................ TGTCTGCATCGTGTAGCGCAGCGGAACAGGGCA 910601 28 100.0 33 ............................ CCTTGGCGGGAGCACCCTTTCCCCGATCATCTC 910662 28 100.0 33 ............................ ATAAGGAGAAAGCCGACATGGCAAAGCGTAGCA 910723 28 100.0 33 ............................ TGTCTGCATCGTGTAGCGCAGCGGAACAGGGCA 910784 28 100.0 33 ............................ CCTTGGCGGGAGCACCCTTTCCCCGATCATCTC 910845 28 100.0 33 ............................ ATAAGGAGAAAGCCGACATGGCAAAGCGTAGCA 910906 28 100.0 33 ............................ CTACTATGGTCAGGTGAAACCCGGCCTTTACCG 910967 28 100.0 33 ............................ CGTAGTCGGGGCGGAGTTCGCCGGTGTCGCGGT 911028 28 100.0 33 ............................ TGTCTGCATCGTGTAGCGCAGCGGAACAGGGCA 911089 28 100.0 33 ............................ CCTTGGCGGGAGCACCCTTTCCCCGATCATCTC 911150 28 100.0 33 ............................ ATAAGGAGAAAGCCGACATGGCAAAGCGTAGCA 911211 28 100.0 33 ............................ CGTAGAGCCGGCGACCGTTCAAAGGATCAAGCG 911272 28 100.0 33 ............................ TTATAATCTACTTTAACTTGAACTTCTCCTCCA 911333 28 100.0 33 ............................ TCGCGGCGAAGGTCTACGCCGCGCTCCTGCATG 911394 28 100.0 33 ............................ CGTGACGAGATACGAGTTTCCGGACGTTCACAT 911455 28 100.0 33 ............................ CACCCACGATCACCCCCAGAAAAGAGAAGGCCC 911516 28 100.0 33 ............................ TCATGCGTGTCATCGGTGCTTCCCGCCATCAAG 911577 28 100.0 33 ............................ TGATCATCCTGGGTATCGCCGGTCGCGCCAGGG 911638 28 100.0 33 ............................ GCCATCCGGTGGCTGGAGACGCGCGGCCTGTGC 911699 28 100.0 33 ............................ CACGCCGCCGGATTCCGCGGCCACCGCCTCGGC 911760 28 100.0 33 ............................ TGTTGGGCGGTCGACCGGGACGGCGGTCGACGC 911821 28 100.0 33 ............................ TCATGCGTGTTATCGGTGCTTCCCGCCATCAAG 911882 28 100.0 33 ............................ GCGCCGGCACAGTTCAAACCTCTCCGATTGCCG 911943 28 100.0 33 ............................ CTGCAAAAGAGCATCGAGAGCAGCCTGATTGCA 912004 28 100.0 33 ............................ CGCCGGAATCCAGCACATGACCGAGCCGGAGGC 912065 28 100.0 33 ............................ CAAACTGCCGGATCTGCCGCATCAGCAGCCGGG 912126 28 100.0 33 ............................ TTTTGGGCATTTTGTTCAAGAGTGTTTAAAGAA 912187 28 100.0 33 ............................ CGAGGAGAGCATCATGAGTCGCGCCAAAGCCTA 912248 28 100.0 33 ............................ TCCCGGGCCATCTTGATGTAACTCTTGCGGATC 912309 28 100.0 33 ............................ GCACGCCAAGCAGCAAAAGCCGACGCCCAAGCC 912370 28 100.0 33 ............................ TGTCCGGCGCCTGGTTGGCCGGCACATTCATAT 912431 28 100.0 0 ............................ | A [912456] ========== ====== ====== ====== ============================ ================================= ================== 110 28 100.0 33 GGCTCCCCCGCACACGCGGGGATAGACC # Left flank : CTTGCCACTGGCTTTCAGCGTCGCTAAGCGCGTGATGGACGATCCGTCTTTGCCATTGGAGAGGGCACTGCGCAAAGAAGCCGCCCGGCAGTTTCACAAGCAAAAAGTCATTCCGAAGATGATCGACCGCATCAAGGAGTTGCTGCATGTCGATGACGGTAATGGTGACGCGTAACGTCTCTCTCCGCATGCGCGGCTTTCTGGCATCCTCGATGCTTGAATTGGCCCCCGGTGTCTATAGCGCACCGCGCCTCTCGACTGCAGTCCGCGAGCGTATCTGGGCGGTGGTTGAGGATTGGTTCACTGCCGAGCAGGATGCCTCGGTCGTAATGGTTTGGGTCGATCCCGCAATGCCTGGCGGACAGAATGTCCGGACTCTCGGGCTGCCACCGGTTAAATTCGTTGAACTTGACGGAATAGTCCTGACTCGTCGACCTTAGGGTTTAGTGGATCTTTAACAGTCCGCTTTTTTGTTTTACCTCAAAGCGTTAGCCTATAGA # Right flank : CCCGGCGGTGTCAAGGGCGAAGTGCAATACCTGGTTCATTGAAGGAGCACAAGGAAGTCGAGCGAAGCGAACGAGTGCGACGTCCCCGCGAAGCCATAGGCCCGGATGTTTTGCCGGAATCCGCGGCTTCATCGCGGGTGGAGACGAAACATAAGTGATCCGACAAGGCGTCGAGTCACTGGGGGCGCCTTGGCGGAGTGCGTCGCGGAGAGACGGACGGAGCCGAGGCGGACGCAGGACGGCGCGGGCCGCCGAAGGCAAGGACGTCGCCAGTTTTTTGCTCCCGAGGGGGACGGGGATGTCCCGTCGGGTTTCGCAAAAAATGGCGACGCTCCATCTGTCTGAAAGAAGCCGATGAATACAAGAGCTTCCGGAGGAGGGACACTCCCGTCCCGACGTCTGTCGACTCAGACACGATCCCGGGTCACATGGTGAGGATGCCTCTGCCCTTAACTTGCCTCCCGCGCGTTTCGATGATCCTTTCAGCGTCGGCCGGACGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACACGCGGGGATAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 1178605-1183652 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP079096.1 Methylococcus capsulatus strain BH chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1178605 37 100.0 33 ..................................... ACCGTTATCTGCGATCCGCCCTATGGGACGATT 1178675 37 100.0 34 ..................................... GTGAGGTTTGCCGGCTACTCACCGCCGGCTGGTG 1178746 37 100.0 36 ..................................... GGAGACCCTCGCCGGGTGATGAGCTGGGGGCCTAGC 1178819 37 100.0 33 ..................................... CGCCATGCCCCCCAGGTAGCCCACCAGCGCCAA 1178889 37 100.0 34 ..................................... ACCGCTCGACTATTCCTAGGAGTCGTGCTCATAA 1178960 37 100.0 34 ..................................... TTGCTCGACTTCTCGGCCTGCTCGTCGGTATCGG 1179031 37 100.0 35 ..................................... CCATCATCCGTGACCTGCAGCGCGAGTTGCGTCGA 1179103 37 100.0 34 ..................................... CAGATCGACCGGGCACAGGCAGCAGTGCGGCAGC 1179174 37 100.0 34 ..................................... CTCTTCCTCGTCGGCGAGGGTGACGCCATCGGTC 1179245 37 100.0 36 ..................................... AGACAGAACGTAGAGCTATAACGTTGCCAAATACTG 1179318 37 100.0 34 ..................................... ACCACCAGCCCAGCCGTTCAGGGCGGGGAAGGAT 1179389 37 100.0 35 ..................................... CTAACATTGTGAGGCAAATCTGTGCGCCAAAAATT 1179461 37 100.0 33 ..................................... ATAGGGGTGGTGTGAATTCATCACAAGTGAGAT 1179531 37 100.0 33 ..................................... ACATCGACAGCCCAGCGGCTGCGGCCCAGATCA 1179601 37 100.0 36 ..................................... AACTGAAAGCCCGAGAAGCCCAGCCTTCAGGCCGGG 1179674 37 100.0 35 ..................................... TGCTCGCTGGATGTGGCGGAGGTGGCGGTGGTGGC 1179746 37 100.0 34 ..................................... TGCAATTCACGGGCGCACAGGATGCGCAAATTTG 1179817 37 100.0 35 ..................................... CGCGGTCGGGACATCGCGCCCGGTGTACTTAATGC 1179889 37 100.0 34 ..................................... AACTCCTCAAGCATGCTCCGAGCGATATTCTTGA 1179960 37 100.0 34 ..................................... GTCTGTCAGATAACCGCAATCGTTGCCAGACCAC 1180031 37 100.0 34 ..................................... CAGCTGGGCCTTACTCAGCACGAACTTGCACTGA 1180102 37 100.0 34 ..................................... CTGTCACGCATGCGCTTGTTGTTGGCCTCTCGGC 1180173 37 100.0 33 ..................................... CATGGCAGCTCTCCGTCGGCATCTGGCCGGAAT 1180243 37 100.0 33 ..................................... ATGTCGTCGATCTGCTTGTTGCCGGCGGCAATC 1180313 37 100.0 35 ..................................... AGCCATGGGTAACGCTCCTTATGCTGCGTTGGGGA 1180385 37 100.0 35 ..................................... TGCCCCTGCGCATGCTCGGCCAGGGCCATCGCTCC 1180457 37 100.0 35 ..................................... TGCGCCATGCCCGCATGGTGCAGGCGTGGCGAGAG 1180529 37 100.0 35 ..................................... TGCTCGCTGGATGTGGCGGTGGTGGCGGAGGTGGC 1180601 37 100.0 33 ..................................... GAATCGGTGCGGATTGCTTGGACATGAAAGGCC 1180671 37 100.0 35 ..................................... CGGTAATAGGGGCGGCTGGTGTCTATCGGACGGTG 1180743 37 100.0 34 ..................................... CTCGCCGCGCTGTCCGGCATCAAGGACAAAACCG 1180814 37 100.0 35 ..................................... GTCAAACCGCCGGAGCCGAAGGGATGAAAGAACGC 1180886 37 100.0 34 ..................................... AATAATGCGATGGAATTCGAACGCCAGTCTCCGA 1180957 37 100.0 37 ..................................... ATCGGCCAACCCGGCCAGATTGCTGCCGCAGCCAGGA 1181031 37 100.0 34 ..................................... CGCTTCGGCCCAACGCGCATGAACACGCTCTCGT 1181102 37 100.0 35 ..................................... GCCGTTGCCCCGCCGCGCTTGCCGAACCGCTTGCC 1181174 37 100.0 36 ..................................... GAGATTGGCGGCGTCCACTACGGTCCCGGTCGGAGC 1181247 37 100.0 35 ..................................... TTCGCGTCCATCGACGACGACGCCGCCGACATCGC 1181319 37 100.0 34 ..................................... ATTGCGGCCAGCTCAGTCTTGGTGGCGGTCAGCT 1181390 37 100.0 40 ..................................... AGGCGACGGTCGAGAACAGCGCGGTTCTCGCCGCGCTGTC 1181467 37 100.0 34 ..................................... CCATCGCATCGACCACCTGTTCGGCGGTATGCAC 1181538 37 100.0 34 ..................................... ACCTCTCGACGCTGTCCGAATCGGTAGCATCGAC 1181609 37 100.0 33 ..................................... TTTGACAGCCCATCGCACGATCTGGCGTTGAAA 1181679 37 100.0 34 ..................................... GCCACGATGCCGACGCCATCGAGGCGCGGCCGCG 1181750 37 100.0 33 ..................................... GGCCGGGATTCGATGGGCTGGCACGCCGACGAC 1181820 37 100.0 34 ..................................... AGCGTCTCCGGGTGATCCTTCTTGTCGAGCCACT 1181891 37 100.0 35 ..................................... TGACAGCGCCTCGTACACCAGCGCCCGCAGCTCCT 1181963 37 100.0 34 ..................................... TGAGCGCCCTGGCGCCGCTGGCGAGGGACATCAT 1182034 37 100.0 35 ..................................... CGCTGGGGGCATGAATGAGGCCGATATTCCAAGGC 1182106 37 100.0 34 ..................................... GAGAAGGACTCGGCCATCGAGACGCTCGGCTGCA 1182177 37 100.0 33 ..................................... GAGGAAGACGAGTCCGGGCCGAATGGCGTCAAC 1182247 37 100.0 34 ..................................... CCGCCGAGGAGATGAAATGGAAGCTAAAGTCTAC 1182318 37 100.0 34 ..................................... TTTTCGAGGTAACGCCATGGTTCGCTTGATCGCC 1182389 37 100.0 34 ..................................... CGCCTTTATGCTTGCCCTGCAGACCTTGATCGTC 1182460 37 100.0 36 ..................................... TTGTCGTACCACTCGCGCACCACGTCGGCGAAGGTC 1182533 37 100.0 34 ..................................... CTCCATCGCCGCGATGTTGGCCTGATGGAAGGTC 1182604 37 100.0 36 ..................................... CTGCCTATATCTTGGCTGGAGCGCGTCCAAAATACA 1182677 37 100.0 34 ..................................... GGATTGCGATATTTGGGAGCAATAGGTACTCCGG 1182748 37 100.0 35 ..................................... TATATGGTGCCGATCTACGCTCTATCCGTCTGCAC 1182820 37 100.0 34 ..................................... AAGGATGCCTCATGACAGGACTCGGCGTCAGTGT 1182891 37 100.0 34 ..................................... GAGCATGAATGTGAGGAAAATTCGCTGGCCATCA 1182962 37 100.0 35 ..................................... GCGCAGATCGGCGCCGCGCAGATCGACGCCGTGCA 1183034 37 100.0 34 ..................................... CAAAGCAGCCAAATCAACAATCTCAACAAAATTA 1183105 37 100.0 35 ..................................... GAAGGGCTCGGAGGGCTTGAAGGGCTCGGAGGGCT 1183177 37 100.0 36 ..................................... CTGACGACGTCGATATGGCTGGCTGGCGGTCTGGTC 1183250 37 100.0 34 ..................................... GGCGCGTTATCGTGAATACGATGACAATCGCGCC 1183321 37 100.0 34 ..................................... TGCATCTGCTCCCCGGTGCTGAGGCTCCTCGTGG 1183392 37 100.0 36 ..................................... TGTACGGTGTCCGACGCCTCGAGCGCCTCGGCCTCG 1183465 37 97.3 37 ........................G............ GAGTGAGCACGCCCATGAACGAAGAACCCAACGCTCC 1183539 37 100.0 38 ..................................... CCGGGGATCAGCCCATGCCAGCAGGGTGAGGACCGCGG 1183614 37 91.9 0 .........................C...G......T | CT [1183639] ========== ====== ====== ====== ===================================== ======================================== ================== 71 37 99.8 35 GTATCTCCCGGCTAAATAGCCGGGAGTGGATTGAAAC # Left flank : CATGAAATTGAACCCATGGGCTTTTCGTCATGTTGATTTTGGTTTCCTACGATGTCTCCACCGAAACCGCCGCCGGCCGCAGACGTCTGCGCCATGTGGCCAAGGTATGTCTGAATTACGGCCAGCGCGTGCAAAAGTCCGTGTTCGAATGCAAGGTCAACCTCGCCCAGATGGAAACACTCAAGGCAGAATTGCTGGATGAGATCGACGAGAAAGAGGACAGCCTGCGCATTTACCGCATCACCGAACCGTTGGAGAAAAACCTCATGGAGTTCGGCAAGTTCAAGGCGGTTGACTTTGAAGACACGCTCATCGTTTGAAATGCGCGAACCTCAAGCGATGCGAATTTGGCCGGGGGTTCGCGCAACTTCCAACTGGTTGAAAAACCAGTCGATAGCGGAGTCATCCCCGATCCGCATCACGCCGGCGGACTGGCTCGACCACCCGTCCGCTCTTCCCTCGAAAAAAATCCTAGCTTATCATCAAGCTGCGGCAACGCC # Right flank : TACGGATACGCTTGCGAAACAGGAGGAAATGAATGATGCGGAATGCGGCCAGGGTCATTCCTGTGATTCTGATCTCGGCAGTCGCCCTGCACGGCTGCGCGATCGGGTACCAATTCAACTACGCCGAAGCCGAGCCTACCATTCGGACGAACCCCAAGATCGTGGTGGCGGTCGGCTTCCAAGATCGACGCCCTGCGATCGTGAGCCAAAAGAAGCCTCCCGATTACGTGGGGGTTCTTCGGTCCTCGCTCGGCATCCCCTACAGTGTCACCACGGAGTCGGAGAGACCGATGGCGGACGACATGGCGACCGCCGTGGCGGGAGCGATCGAGCGGGACGGAGGCAAGGCGATTGCGCTATCCATTGCGCCGACTGCGTCGATGGCGGAAATCGTCCGCGATGCCAAGGTTAGAGGCGCAGGAACGTGCATGGTATTCACCCTGCGCGACTGGCAGACGGACACCTACATGAGCACGAATCTCGTCTACGACGTGGCGGTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCTCCCGGCTAAATAGCCGGGAGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.20,-15.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //