Array 1 27744-28016 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010833.1 Streptomyces sp. Tue 6075 strain Tue6075 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 27744 29 79.3 32 TG....A..A...C..............A GTCCTCAGCTATTACGTAGCGCCAGGCAGTTC 27805 29 93.1 32 .......................A....A CGGCGTCTCACGTGCTCGTTGGCCCTCTCGTA 27866 29 100.0 32 ............................. ACCCGGCCGATGCGCTCGATCAGCACTGCGTC 27927 29 89.7 31 .....................A...T..T ACCGCCTTAGCGGCAAGGGTGTGCCGCCCTT T [27952] 27988 29 75.9 0 .CA........AT.........C.G.T.. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 87.6 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : AAACGGCCGATTTCACCGCCGCGCCCCGAAACGAGCCTGGAGGGAACGGGCCGGGCTCGCATGCTGGTGCGGAACCGGCGGTCGGCGAACTGGTCGCTGGAAGCAGCCCCGTGGGCTGCGCAGAAGGCATCGGGTTGCGTGTTGGGCCAGTTGCACGACTGGGGATACCGACAGGCCGATGAGACAGCGGCTGGACTGACAAACCTTCTGGTACACACTGCGGTCGCGGACGGCGGCCGCCGCGTGTCTGTACACCTCGCAGACCAAAACCGGCAGGCGTTGATCGTCGTCCTGTCTCACCAGCCGGGCCTCGCCGTCGCAGACACGGCGGTGCTGCCGGAGCTGACCGAGCTGGGTGCGGCGTCGTGCGGAACGGATACGGCAGAGGACGGGCGCAGAGTGTGGGCGGTCCTCGACCTATAGGTGAGATTTGAGGAGTGCTTGCTGTAGCACGGTGGAGTTCCCGTACAGGTATAAAACCCTTCACCCCGGACGGAAAC # Right flank : GACGAGGAAAGCAGGGCCTCCAACTACGCCGTAGGGCGGCCATATGGGCCTCTACGCGCGAGCTTCCGGCGTTATAATAGAAAATTCGAACTTCTGCCCTAGATGGCCTCTTTCGGGATTAACTCACCTAACGCGTGTCTCCTTCTGCTTGCATCTTCTTGAAGCGCGCAAACGCAGGAAGGCAGCAGCGCTGGAGCTAGGAGTATTGACCCGCAGGGTTGTTGACGCGGGTGATGGGTGGCCGCCGAGTGCGGTGTGGCTGCGGTGGTGGTTGTAGGTGTGGAGGAAGTCTGCCAGGGCCCTGGTCCGTTCGTCGTTGGATCGGTAGGGCCGCTGGTAGGCCCATTCGTCGGCGAGGGTGCGGTTGAAGCGTTCGACCTCGCCGTTGGTCTGGGGCCGGTAGGGACGGGTGAGCTTGCCGGTCGCGCCGAGGCCGGCCAGGGCGTTCTTCCAGGCCAGGCCGCGGTCGCCACCCGTTATGACAAGAGGGCCTACGTCTT # Questionable array : NO Score: 3.45 # Score Detail : 1:0, 2:3, 3:0, 4:0.38, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.90,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3636680-3637013 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010833.1 Streptomyces sp. Tue 6075 strain Tue6075 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3636680 29 96.6 32 ...............G............. GACTCCGTCGCCGCGGCCGCAGCCAGATCGGG 3636741 29 93.1 32 ...............G............G TACCTGGCGGCCGTGGACGCGGTGCGGAAGGC 3636802 29 93.1 32 ...............G............G GTGTTGAGGGTGTCGAGCTTCGACACTTTTTG 3636863 29 100.0 32 ............................. AGGGCCTCAAACCCCGGAAGTTGACGAAGAAG 3636924 29 100.0 32 ............................. TTCTCAAGTAGGGCGGCGAGTTGAGGCATCCC 3636985 29 86.2 0 ...............G.....CC.G.... | ========== ====== ====== ====== ============================= ================================ ================== 6 29 94.8 32 GTGGTCCCCGCGTGCTCGGGGGTGTTCCC # Left flank : GACAAGATCCCGCCCCAGCTCCCTGGCGGGCCCGCATCGCCAGGCACGGGCACCCCGCCCCCAGTCGCCCGCATCCTTGTCGAATGCACCGACTGCGGCCGCCCCGGCCAGCCGGAAGCCCTCCCGGACGGCCTCTGCCGCCCCTGCCGCGCCACCCACTCGCCAGGCGGCCAACTTGCCCCCGACCCCACCGAAGTCGCGGCCGTGAAGGCCCACATGGCCAACCTCCGCGATCTGCTCAAACCCGTCTGATCCCCACCGCGCCGGAACAACCCGCCGCTGCCCGACCTACCGCCCCCAGCAAGACCGACACGCGGATCCTGACGGGACGACAGCCACGCTTCTCTTCCGAGGAACCCGCGCCGCACAGCCGGCAGAGGGCAGAATCGCCACTGACGAACTCCAACTGCGACCACTGCAACCCCAGGAGCGATATGCCTGTTTCTCAAGAAGTGAGCAAAAACCGCTCCCGGAGCGCATAAAGCCGCAGCTCACGAACT # Right flank : CGCACCGCCCGCGACGACGAGTGGATGGACCGCCTGCCTGGCCACCGAGAAGGCCGCCCGGACGCAGCCCCTTCGGAGCCCCCGGCCGCCCCGGCACTACCCCCGGCCTGCCGGAAGTCCTCCCCGGCGGCCTCTGGCGCCCCTGCCTCGCCGCCCGCTCGTCAGGGGCCAGCCCTCGCCCTGTCCCGCCCAAATCGCAGCCATCAAAGCCCACATGGCCAACATCGCGGCCTCCTCAAAGCGCCCCGGGAGGCAAGCAGGACACCGTCAGGGCGTGACGATGGCGAAGCCGGGGTCCGGGTCGTCGAGGACGGACATGAGGGCGGTCAGGGCGCCCGGGTCGCCGGTTTGCTCGATGCCGTCGAAGCCCAGGCCGCCCAGCAGGTCCATGAGTTGGGCCTTGGTGAGGGTGAGCGTGAGATCCGCGCTGTCGGCGGCAGAGCCGTCGGCCACCGGGTGGTGCACCAGGACCCCGTTGCGCAGGCTCGTCCGATACGTCG # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGTGCTCGGGGGTGTTCCC # Alternate repeat : GTGGTCCCCGCGTGCTCGGGGGTGTTCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 3782744-3782894 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010833.1 Streptomyces sp. Tue 6075 strain Tue6075 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3782744 29 100.0 32 ............................. GCGTTGGACATCCGGACCCACTCCTCCGCAAT 3782805 29 96.6 32 ............................C GAGACCGGGCTCGCCTGGCTCCCGTTCATCGC 3782866 29 86.2 0 ......................C.CC.T. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 94.3 32 GTGGTCCCCGCGCACGCGGGGGTGTTCCG # Left flank : GCCTGCCGGCCATCCCAAGCACCGCAGCCGACACCCCCACCCCCACCCGACGCCTCCTCGTCGAATGCACCGACTGCGGCCGCCCCGGCCAACCCGAAGCCCTCCCCGACGGCCTGTGCCGCCCCTGCCACACCGCCCACTCCGCAGGCGGCCAACCCTCACCCGACCCCACCCAGATCGCCGCCGTCAAAGCCCACATGGCCAACCTCCGCACCCTCCTCAAACCCGTCTGAACTCGAACCACAACTGACCAACCCGTCGCTGCCGGGCCTGCGTAGTCGCAGGGCAGAACGGACACTCAGCAGGACCAACACTCCTGCCCTAAGGGGACGATGGCATTGCCTCCCTGCGGAGGAAGCTGCGCTGCACAGCCAGCAGAGGGCAGAATCACCATGGACGAACTTCAACCGCGACCGCTGCAACGGCAGGGCGATATGCCCATTTCTCAAGAAGTGAGTAAAAACCCCTCCCTGGCCACATAAAGCCGCAGGTCACGAACT # Right flank : GCCGGAAGAAGACGGCGTGGGACGTAGCCGTGCAGGCCACTCCACTTTCCACTCCGGAAACTCTTCTCTTTCCGTATCGGAAACTCTCCGCTACTCTTTCCGCCATGGAAACTAACGGGGGACGACCGACACCCGAGCAGGCCCAATCCGCCCTGGCCGAGGCCGAGCAGATCCAGGCCTCCGCCGCAGTGCTCTCGGCGACGCCTTGGCCGAACTGGTTCTTCGCCACGCTCACGCTCTACATCGCCGTGGTCCCGATCGTCTACGGAGGCGTCATGGCCGACGAGGACTGGCTGCTGCCGAGCCCGGCCTGGACCGGCATCATGCTGGCGATCACCGCGCTGTACCTGGGCCTCTTCGCCCTCGCGGCCAAGACCTGGCGGGAGAAGACCGGCGTGGCTCTGCGACTGGACGTGCTGCCCAAGCGGGCCACCGTGCCGCTCGCGGTCGGGCTGCCCTCGATCCTCGTGGGCGCGGCGTTCGCGTTCCGCTTCACAGGG # Questionable array : NO Score: 3.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 5739021-5741064 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010833.1 Streptomyces sp. Tue 6075 strain Tue6075 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 5739021 28 100.0 33 ............................ GCAGGACCGGGCCCGCGCCAAGGCCCGGAGGAA 5739082 28 100.0 33 ............................ CCCAGCCGGGAGAGACCACTGGGGGCCGTCAGA 5739143 28 100.0 33 ............................ GCCTGACCGGCGCCCTCGTCGCGCCCCGCCTAG 5739204 28 100.0 33 ............................ AGTCCGACCCGGGCCAGCTGAAAGGGAGCGAGG 5739265 28 100.0 33 ............................ TCCGCAGTACGTCCAGTGCTCCGCGTGCAGGAC 5739326 28 100.0 33 ............................ GGCCGGTTTGTCGCTGATCCACCGGTAGACCAG 5739387 28 100.0 33 ............................ GAGCGAGGAGAAGCGCCTCGCGGAGCACCGAGC 5739448 28 100.0 33 ............................ GGACTGCGCCGACCGCAACACCCCGCCCCCGGC 5739509 28 100.0 33 ............................ GCCCTTCACGCTGTACGGGGGGAGCGGGAGCGG 5739570 28 96.4 33 ...........................T GTACCGGGGCGTCGCCCGCCTGTACTCCTCGCA 5739631 28 100.0 33 ............................ CTGTCGGAGACGCAGCCCGGCAGCTGCTCGATG 5739692 28 100.0 33 ............................ GTTCACGGGTGACGCGCGGCGACTGTTCTTCGG 5739753 28 100.0 33 ............................ GGCATTGCCGTACCTACCGCTTGGCGGGCGTGA 5739814 28 100.0 33 ............................ GGTCTTTCTGACCTGGGGCGTTTCGGTTTCTCC 5739875 28 100.0 33 ............................ GGCCAAGGTCCGGGAGTGGGCGGCCACCCTCGG 5739936 28 100.0 33 ............................ GAGGCTAGACCCGGCCACGGTGGAGGCCGCCCG 5739997 28 100.0 33 ............................ GCCCAGCGCGGCCGAGCCCAGTCCGGCCCGCAG 5740058 28 100.0 34 ............................ GCGGTCCGGGGTTCACCTGATCACCCCCGCCCCC 5740120 28 100.0 33 ............................ CCCGCAGCAGGTCGTCGACTGGATTCAGGCGCA 5740181 28 100.0 33 ............................ GTCGGTGATCGGCCACCTGGAGTGGCAGCCGGG 5740242 28 100.0 33 ............................ GGTCAGCCGCATCAGCGGCCTGCAACTGGGCGG 5740303 28 100.0 33 ............................ GTGCTCCGCTTCCAGGTCGATGTCGGCGGCGAG 5740364 28 100.0 33 ............................ GGGGTTCGCATACCGGCTGCGCGGGCCGACGTA 5740425 28 96.4 38 ...........................T GATTTGATCGGCACCGTCGGATGCACCGGCAACTCCTC 5740491 28 100.0 33 ............................ GCAGGTGATGGGCTCCATCAACTTGTTCGGGGT 5740552 28 96.4 33 .....................G...... GTTCGTCTGCGACCGGTGCCATCGCGACATGCG 5740613 28 100.0 33 ............................ GTCCGCCATTCCCGGACCGATTGCCGATGCCCT 5740674 28 85.7 33 .......T....TT............T. GATTGCGGCCGAGCTCGGCGTCACCTTCGGTGA 5740735 28 100.0 33 ............................ GTCGGTACTCGGGTGACTCCGGTCGACCACGGT 5740796 28 100.0 33 ............................ GACGAGGTGAACGTGGGCGTCGATGAGCCCTGG 5740857 26 92.9 33 ........--.................. GAGGATCGGGATCACGGCGTGCATTCCTACGCC 5740916 27 82.1 33 ........G....TC..C.......-.. GGGCAACGACGTCGTCGTGCCCTGCCAGACGAC 5740976 28 89.3 33 ..C..........T...A.......... GGCTGTCTGGACGGAACTCGACTCCCCCAGGGA 5741037 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ====================================== ================== 34 28 98.2 33 GTGGACCCCGCGCCTGCGGGGATGGTCC # Left flank : TTCGACGCCCCCGAAGCCAACAGCCTCTGGGACGAGAGTGTTGGCGCTGTTCCGGGAGGCACGAACTACGCGAGCCACGCGGACCTGTCGGCACACGGAATGACCGACAACCACATCGCGGTCATCGGACCCGAACCTCACGAAACCGAACCTCACGAAACCGAACCCACGTCGTGACCGTCATCATTCTCATCGCCGCCCCGGCAGGGCTCCGTGGTCACCTGACCCGATGGATGGTCGAGGCCAGCGCCGGAGTATTCGTCGGCAACCCCAGCCGCCGGATCCGCGACCGCCTCTGGGAACTCCTGGCCACCCGAATCGGCGACGGCCAGGCCATCCTCATCGAACCCGCCGCCAACGAACAGGGATGGGCCGTCCGCACCGCAGGCCGAGACCGCTGGCAACCTGTCGACTTCGACGGCCTGATTCTCTCGGCCCGCCCGAAGAACCCACCAAACGAAAACAGCCACCCTGCCCGGTAAACGACCAGCTCAGGAAGT # Right flank : CATGCGCCGGAAGGCTCCGCGAGTACGTCCGGAGTGATTTCGCACCGCGGGAACTGCCCCGCCTTCACCCGTGCGCGACCACGGACGATGCGAGCCCCGGCGTCTCCACCAGAGGTCCTGTGCGGCTGATACATGGGGGGGAGATGCTCGCGAGGCTTTGGGGGAGTGCCCCGCCGGGAGGTGTGCAGTACCGCCCAGCGGCGCCGGGACGGTACGCGATCGCTTCCTCCGGAGTTCGCTTGCCTCGACGGCCGCGGGGTGGACGAGGCGAATGCTGGTGGCGTACCACGCCTATGCACATCGTGGACTACGGCGAAGGGCGGCCGGTATGTCCGGGACCCGGATCGATCTCGATGACGAGGCATTGGCCGAGGCCATGCGGCTCATGGGTACCTCGACGAAGAAGGAGACGGTGAACGGCGCCCTGCGGGACTACGTGGCGCGGATCAAGCGGCTGGAGGGTGCCGAGAAGCTGGCCGCGTGTGGTGAGAAGGGCGAGT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGACCCCGCGCCTGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCATGCGGGGATGGTCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //